Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 2.3e-69 265.4 131 100.0
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 1.4e-66 256.1 131 96.9
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 1.1e-37 160.2 134 61.2
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 1.8e-37 159.5 133 60.2
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 3.1e-37 158.7 134 58.2
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 3.1e-37 158.7 134 58.2
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 5.3e-37 157.9 132 59.1
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 6.9e-37 157.5 134 60.4
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 9.0e-37 157.1 133 60.9
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 9.0e-37 157.1 135 58.5
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 1.2e-36 156.8 134 56.7
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 1.2e-36 156.8 134 56.7
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 1.2e-36 156.8 134 56.7
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.2e-36 156.8 132 59.1
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 2.0e-36 156.0 132 59.8
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 2.6e-36 155.6 132 58.3
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 3.4e-36 155.2 132 60.6
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 5.8e-36 154.5 132 59.1
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 5.8e-36 154.5 126 61.9
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 1.7e-35 152.9 134 56.0
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 1.7e-35 152.9 132 59.1
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 1.7e-35 152.9 126 60.3
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 1.7e-35 152.9 126 61.9
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 2.2e-35 152.5 143 55.9
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 2.2e-35 152.5 134 54.5
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 2.9e-35 152.1 132 58.3
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 3.8e-35 151.8 134 56.7
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 4.9e-35 151.4 132 58.3
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.4e-34 149.8 126 57.9
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 1.9e-34 149.4 134 56.0
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.9e-34 149.4 133 58.6
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 3.2e-34 148.7 135 55.6
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 3.2e-34 148.7 127 59.8
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 9.3e-34 147.1 107 65.4
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 1.2e-33 146.7 138 57.2
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 1.6e-33 146.4 133 57.9
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 2.1e-33 146.0 133 56.4
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 6.0e-33 144.4 137 55.5
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 6.0e-33 144.4 134 58.2
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 6.0e-33 144.4 140 54.3
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 6.0e-33 144.4 132 58.3
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 6.0e-33 144.4 127 59.8
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 7.9e-33 144.1 140 56.4
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 1.0e-32 143.7 133 57.1
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 1.3e-32 143.3 134 54.5
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 2.3e-32 142.5 139 54.0
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 3.0e-32 142.1 138 55.8
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 3.9e-32 141.7 135 54.1
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 5.1e-32 141.4 138 55.8
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.9e-31 139.4 134 57.5
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 2.5e-31 139.0 139 54.0
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 2.5e-31 139.0 128 60.9
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 3.3e-31 138.7 138 52.2
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 4.3e-31 138.3 137 53.3
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 4.3e-31 138.3 143 53.1
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 5.6e-31 137.9 133 54.1
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 9.6e-31 137.1 141 51.8
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 9.6e-31 137.1 127 55.1
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 9.6e-31 137.1 136 52.2
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 1.6e-30 136.3 132 55.3
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 1.6e-30 136.3 132 53.8
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.6e-30 136.3 139 51.1
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.6e-30 136.3 139 51.1
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.1e-30 136.0 127 54.3
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 2.8e-30 135.6 139 49.6
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 6.2e-30 134.4 138 52.2
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 1.1e-29 133.7 143 49.7
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 1.8e-29 132.9 126 57.1
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 2.4e-29 132.5 140 52.9
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 2.4e-29 132.5 132 51.5
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 3.1e-29 132.1 135 51.1
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 3.1e-29 132.1 127 53.5
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 5.3e-29 131.3 139 51.1
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 9.0e-29 130.6 170 46.5
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 2.0e-28 129.4 134 50.7
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 2.6e-28 129.0 139 53.2
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 9.9e-28 127.1 154 45.5
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 2.2e-27 125.9 146 47.9
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 3.8e-27 125.2 138 48.6
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 4.2e-26 121.7 92 62.0
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.8e-24 116.3 95 60.0
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.5e-23 112.5 132 46.2
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.5e-23 112.5 132 46.2
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 9.0e-21 104.0 125 40.8
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 4.5e-20 101.7 114 49.1
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 5.8e-20 101.3 80 63.8
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.9e-19 99.0 94 57.4
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 2.9e-19 99.0 99 54.5
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 3.2e-18 95.5 141 41.1
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 7.1e-18 94.4 100 51.0
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 9.3e-18 94.0 140 42.9
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 2.1e-17 92.8 75 61.3
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 3.0e-16 89.0 118 40.7
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 8.7e-16 87.4 99 49.5
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 3.7e-14 82.0 85 50.6
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 3.7e-14 82.0 97 48.5
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 4.5e-12 75.1 121 36.4
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.1e-10 70.5 105 38.1
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 1.9e-10 69.7 101 44.6
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 2.5e-10 69.3 79 45.6
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.2e-09 67.0 78 47.4
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 3.9e-08 62.0 80 43.8
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 1.6e-06 56.6 101 36.6


User provided reference genes

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