Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 5.0e-145 517.7 253 100.0
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 4.5e-101 371.7 242 72.7
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 4.9e-100 368.2 219 79.5
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.1e-99 367.1 251 70.9
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.5e-99 365.9 223 76.2
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 4.2e-99 365.2 217 77.9
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 9.3e-99 364.0 223 75.8
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.6e-98 363.2 249 71.1
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 1.6e-98 363.2 244 73.8
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 4.6e-98 361.7 220 77.7
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 4.6e-98 361.7 251 70.9
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 4.6e-98 361.7 254 70.5
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 7.9e-98 360.9 243 72.0
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 7.9e-98 360.9 252 69.4
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.3e-97 360.1 218 77.5
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.8e-97 359.8 254 70.5
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 3.9e-97 358.6 253 68.4
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 8.7e-97 357.5 219 76.3
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 8.7e-97 357.5 250 71.2
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 8.7e-97 357.5 256 68.4
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.1e-96 357.1 245 69.4
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.1e-96 357.1 241 71.0
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.5e-96 356.7 256 68.4
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.5e-96 356.7 224 75.0
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.9e-96 356.3 247 70.0
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.5e-96 355.9 252 67.1
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 3.3e-96 355.5 215 79.5
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 3.3e-96 355.5 251 67.7
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 4.3e-96 355.1 224 76.3
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 4.3e-96 355.1 223 73.1
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 9.7e-96 354.0 224 75.9
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.3e-95 353.6 245 71.4
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 2.1e-95 352.8 223 72.6
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 2.8e-95 352.4 239 69.9
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 2.8e-95 352.4 258 67.1
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 3.7e-95 352.1 234 71.4
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 6.3e-95 351.3 241 71.0
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 6.3e-95 351.3 223 72.2
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 6.3e-95 351.3 241 71.0
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 8.2e-95 350.9 241 71.0
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.1e-94 350.5 242 69.0
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 1.1e-94 350.5 251 68.9
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.1e-94 350.5 224 75.0
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.4e-94 350.1 255 66.3
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.8e-94 349.7 224 73.2
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 2.4e-94 349.4 235 71.5
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 2.4e-94 349.4 224 73.7
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 4.1e-94 348.6 242 69.0
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 4.1e-94 348.6 253 67.6
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 5.3e-94 348.2 224 72.3
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 6.9e-94 347.8 238 70.2
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 2.0e-93 346.3 242 68.6
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 2.6e-93 345.9 224 71.4
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 2.6e-93 345.9 242 68.2
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 2.6e-93 345.9 224 73.2
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 4.5e-93 345.1 242 68.2
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 5.9e-93 344.7 224 71.4
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 7.6e-93 344.4 242 67.8
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 7.6e-93 344.4 224 71.0
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 7.6e-93 344.4 242 67.4
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 7.6e-93 344.4 224 73.7
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 1.0e-92 344.0 242 67.8
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.3e-92 343.6 256 66.4
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 1.7e-92 343.2 242 66.9
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.7e-92 343.2 253 66.0
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 1.7e-92 343.2 222 74.3
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 1.7e-92 343.2 224 72.3
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 2.2e-92 342.8 242 67.4
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 2.2e-92 342.8 242 67.8
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 2.9e-92 342.4 228 70.6
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.9e-92 342.4 241 69.7
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 3.8e-92 342.0 252 65.1
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 3.8e-92 342.0 220 71.8
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 3.8e-92 342.0 227 70.9
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 5.0e-92 341.7 215 74.0
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 1.1e-91 340.5 226 69.5
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.1e-91 340.5 226 71.7
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.4e-91 340.1 217 72.8
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 2.5e-91 339.3 225 71.6
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 2.5e-91 339.3 253 67.2
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 5.5e-91 338.2 217 73.3
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.2e-91 337.8 247 69.2
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.2e-90 337.0 255 66.3
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 4.6e-90 335.1 247 66.0
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 4.6e-90 335.1 223 70.9
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 4.6e-90 335.1 255 65.5
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 6.1e-90 334.7 239 68.6
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 6.1e-90 334.7 242 66.1
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.3e-89 333.6 251 64.9
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.8e-89 333.2 217 71.4
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 7.4e-88 327.8 241 66.8
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 9.7e-88 327.4 233 66.5
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 3.7e-87 325.5 343 52.2
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 4.8e-87 325.1 203 73.4
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 3.8e-84 315.5 228 66.7
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 7.2e-83 311.2 287 58.2
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 2.1e-82 309.7 231 65.8
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 2.7e-82 309.3 224 65.2
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.8e-78 296.6 183 78.1
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 2.6e-77 292.7 206 68.4
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 1.4e-75 287.0 191 73.3
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 1.0e-73 280.8 208 67.8
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.1e-70 269.2 217 61.3
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 5.5e-67 258.5 215 58.6
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.0e-64 250.0 215 56.7
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.7e-60 236.9 217 52.1
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 1.7e-55 220.3 141 72.3
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 6.8e-49 198.4 168 60.1
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 3.5e-45 186.0 101 82.2
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 4.7e-42 175.6 213 45.1
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 9.8e-40 167.9 125 65.6
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 6.0e-37 158.7 211 43.1
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 6.6e-36 155.2 213 42.7
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 2.8e-34 149.8 107 68.2
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.3e-33 146.7 119 65.5
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 6.8e-33 145.2 194 43.3
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 3.7e-31 139.4 120 61.7
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 4.9e-31 139.0 92 70.7
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 4.9e-31 139.0 92 70.7
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 3.6e-26 122.9 95 64.2
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.6e-24 116.7 96 62.5
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.9e-23 112.5 79 70.9
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 2.4e-22 110.2 146 45.9
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 2.4e-22 110.2 146 45.9
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 2.7e-21 106.7 62 74.2
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.9e-20 102.8 82 64.6
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.1e-17 94.7 91 57.1
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 4.4e-16 89.4 193 32.6
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 9.9e-16 88.2 55 70.9
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 6.4e-15 85.5 196 32.7
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 8.4e-15 85.1 179 33.0
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.3e-12 77.8 48 75.0
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 6.2e-10 68.9 48 66.7


User provided reference genes

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