Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 3.5e-175 618.2 324 100.0
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 4.7e-127 458.4 304 80.6
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 4.8e-116 421.8 314 72.3
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 2.3e-102 376.3 315 70.2
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 1.5e-101 373.6 281 69.0
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 4.4e-101 372.1 281 71.5
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 3.5e-82 309.3 155 100.0
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 6.6e-81 305.1 267 65.2
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 8.1e-71 271.6 236 66.9
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 4.0e-70 269.2 236 66.5
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 2.3e-65 253.4 316 53.8
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 7.3e-64 248.4 314 50.6
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 3.5e-58 229.6 341 46.9
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.6e-55 219.5 159 76.1
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 4.8e-55 219.2 318 50.6
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 6.2e-55 218.8 235 58.3
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 4.4e-53 212.6 175 68.6
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 4.3e-48 196.1 233 55.4
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 6.2e-47 192.2 233 54.5
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-46 190.7 287 47.4
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 2.3e-41 173.7 244 48.4
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 3.7e-39 166.4 214 53.7
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 5.5e-35 152.5 212 50.9
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 3.5e-34 149.8 331 37.8
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 7.9e-34 148.7 99 78.8
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 1.0e-33 148.3 331 36.9
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 2.3e-33 147.1 331 37.5
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 3.0e-33 146.7 331 37.2
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-32 144.4 99 76.8
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-32 144.4 331 36.9
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 5.7e-32 142.5 335 36.4
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 5.7e-32 142.5 346 37.3
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 5.7e-32 142.5 331 36.6
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 5.7e-32 142.5 327 35.8
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 7.4e-32 142.1 331 37.5
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 7.4e-32 142.1 335 35.2
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 9.6e-32 141.7 332 35.5
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 1.6e-31 141.0 331 36.0
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.8e-31 140.2 331 36.0
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 2.8e-31 140.2 331 36.9
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 2.8e-31 140.2 331 36.9
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 3.7e-31 139.8 331 36.3
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 3.7e-31 139.8 331 36.9
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 4.8e-31 139.4 331 35.6
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 6.2e-31 139.0 331 36.6
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 6.2e-31 139.0 334 34.7
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 8.2e-31 138.7 334 34.7
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.1e-30 138.3 327 35.2
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 1.1e-30 138.3 331 35.6
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 1.1e-30 138.3 334 34.7
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 1.1e-30 138.3 331 35.0
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 2.4e-30 137.1 331 35.0
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 2.4e-30 137.1 331 34.1
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 3.1e-30 136.7 331 35.6
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 4.1e-30 136.3 331 34.4
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 5.3e-30 136.0 331 35.6
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 6.9e-30 135.6 341 33.7
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 9.0e-30 135.2 335 34.3
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 1.2e-29 134.8 341 34.6
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 1.2e-29 134.8 331 34.7
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 1.5e-29 134.4 331 34.1
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 2.0e-29 134.0 331 36.0
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 2.6e-29 133.7 329 35.6
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 4.5e-29 132.9 336 34.2
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 4.5e-29 132.9 335 35.5
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 4.5e-29 132.9 339 34.2
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 5.8e-29 132.5 325 35.1
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 5.8e-29 132.5 336 34.2
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 5.8e-29 132.5 335 34.9
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 5.8e-29 132.5 331 35.6
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 5.8e-29 132.5 331 35.3
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 5.8e-29 132.5 330 33.6
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 7.6e-29 132.1 331 35.3
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 7.6e-29 132.1 331 34.4
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 7.6e-29 132.1 332 35.5
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 1.0e-28 131.7 327 35.2
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 1.0e-28 131.7 336 33.9
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 1.0e-28 131.7 336 34.5
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 1.3e-28 131.3 332 35.2
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 1.3e-28 131.3 341 34.3
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 1.7e-28 131.0 334 33.2
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 1.7e-28 131.0 331 34.1
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 2.2e-28 130.6 336 33.9
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 2.9e-28 130.2 345 33.0
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 2.9e-28 130.2 332 33.4
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 6.5e-28 129.0 336 33.6
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 6.5e-28 129.0 327 33.3
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 6.5e-28 129.0 324 32.4
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 1.1e-27 128.3 331 34.4
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.4e-27 127.9 327 33.3
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 2.5e-27 127.1 336 33.6
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 3.2e-27 126.7 332 35.8
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 5.5e-27 125.9 344 32.6
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 1.2e-26 124.8 346 32.1
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 1.2e-26 124.8 329 33.1
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 1.6e-26 124.4 356 32.6
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.6e-26 124.4 327 32.7
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 2.1e-26 124.0 350 31.7
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 2.7e-26 123.6 331 32.9
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 7.9e-26 122.1 331 32.3
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 1.0e-25 121.7 333 30.9
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 3.9e-25 119.8 330 33.3
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 8.7e-25 118.6 335 32.5
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 8.7e-25 118.6 303 34.3
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.1e-24 118.2 326 33.1
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.1e-24 118.2 331 32.9
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 2.5e-24 117.1 345 33.3
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 7.4e-24 115.5 334 30.8
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 7.4e-24 115.5 334 30.8
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 9.7e-24 115.2 329 32.8
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 1.6e-23 114.4 326 32.8
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 4.8e-23 112.8 326 32.5
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 4.8e-23 112.8 275 35.3
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 6.3e-23 112.5 326 32.8
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 8.2e-23 112.1 333 33.3
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 8.2e-23 112.1 344 31.7
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 8.2e-23 112.1 331 33.2
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 1.1e-22 111.7 326 31.0
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.8e-22 110.9 315 34.9
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 2.4e-22 110.5 337 32.0
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 5.3e-22 109.4 195 42.6
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 6.9e-22 109.0 195 42.6
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 4.5e-21 106.3 326 31.0
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 5.5e-19 99.4 428 28.3
PSO759G0004 Papaver somniferum HOM05D004787 ORTHO05D302987 1.4e-17 94.7 72 68.1
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 1.8e-17 94.4 313 30.4
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 5.1e-17 92.8 416 26.0
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 6.7e-17 92.4 128 49.2
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 5.7e-16 89.4 321 29.0
PSO081G0156 Papaver somniferum HOM05D004787 ORTHO05D304832 7.4e-16 89.0 72 62.5
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 1.7e-15 87.8 344 28.2
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 4.8e-15 86.3 251 34.3
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 6.3e-15 85.9 247 34.4
PSO832G3890 Papaver somniferum HOM05D000071 ORTHO05D003524 3.4e-13 80.1 70 64.3
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 7.7e-13 79.0 104 47.1
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 3.8e-12 76.6 247 31.6
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 1.1e-11 75.1 229 32.8
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 2.7e-10 70.5 185 33.5
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 5.7e-08 62.8 89 41.6
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 2.8e-07 60.5 90 40.0


User provided reference genes

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