Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0240 Papaver somniferum HOM05D001789 ORTHO05D001755 1.0e-161 573.5 293 100.0
PSO675G2350 Papaver somniferum HOM05D001789 ORTHO05D001755 3.6e-34 149.8 107 68.2
PSO421G0436 Papaver somniferum HOM05D001789 ORTHO05D001755 2.4e-30 137.1 174 44.3
PSO170G3495 Papaver somniferum HOM05D001789 ORTHO05D001755 7.8e-29 132.1 174 44.3
PSO081G0105 Papaver somniferum HOM05D001789 ORTHO05D001755 3.9e-28 129.8 102 70.6
PSO675G2075 Papaver somniferum HOM05D001944 ORTHO05D002405 1.2e-26 124.8 275 34.9
PSO732G0800 Papaver somniferum HOM05D001944 ORTHO05D002405 5.3e-25 119.4 282 33.7
PSO591G0302 Papaver somniferum HOM05D001789 ORTHO05D001755 1.6e-21 107.8 82 61.0
vmacro14863 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 1.6e-18 97.8 119 44.5
PSO675G1802 Papaver somniferum HOM05D001789 ORTHO05D001755 4.8e-18 96.3 105 48.6
PSO729G0190 Papaver somniferum HOM05D001789 ORTHO05D001755 4.0e-17 93.2 105 48.6
PSO675G1691 Papaver somniferum HOM05D001789 ORTHO05D001755 6.9e-17 92.4 147 44.9
Aqoxy5G00332 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 1.5e-16 91.3 147 44.9
Manes.05G085350 Manihot esculenta HOM05D001789 ORTHO05D001755 7.6e-16 89.0 142 41.5
PSO170G0197 Papaver somniferum HOM05D001789 ORTHO05D001755 9.9e-16 88.6 120 45.0
Aqoxy2G03555 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 1.3e-15 88.2 149 38.9
PSO063G7083 Papaver somniferum HOM05D001789 ORTHO05D001755 1.3e-15 88.2 79 59.5
Manes.05G085400 Manihot esculenta HOM05D001789 ORTHO05D001755 2.9e-15 87.0 142 40.8
PSO478G3394 Papaver somniferum HOM05D001789 ORTHO05D001755 4.9e-15 86.3 105 42.9
PSO675G6681 Papaver somniferum HOM05D001789 ORTHO05D001755 8.4e-15 85.5 71 60.6
PSO832G0440 Papaver somniferum HOM05D001789 ORTHO05D001755 1.1e-14 85.1 130 44.6
Dinv34576 Davidia involucrata HOM05D001789 ORTHO05D010416 3.2e-14 83.6 90 48.9
PSO478G0068 Papaver somniferum HOM05D001789 ORTHO05D001755 5.4e-14 82.8 141 41.8
QL12p018052 Quercus lobata HOM05D001789 ORTHO05D001755 5.4e-14 82.8 97 46.4
PSO384G0184 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-13 80.9 88 47.7
CDE06G0784 Ceratophyllum demersum HOM05D001789 ORTHO05D001755 2.7e-13 80.5 145 33.8
TAR636G0648 Trochodendron aralioides HOM05D001789 ORTHO05D001755 2.7e-13 80.5 82 48.8
GSVIVG01036270001 Vitis vinifera HOM05D001789 ORTHO05D001755 3.5e-13 80.1 145 35.9
COL.COLO4_03560 Corchorus olitorius HOM05D001789 ORTHO05D001755 4.6e-13 79.7 82 50.0
Os12g0599900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 4.6e-13 79.7 82 47.6
PSO170G3794 Papaver somniferum HOM05D001789 ORTHO05D001755 4.6e-13 79.7 94 45.7
PSO017G4288 Papaver somniferum HOM05D001789 ORTHO05D001755 6.0e-13 79.3 104 43.3
Dinv20290 Davidia involucrata HOM05D001789 ORTHO05D001755 1.0e-12 78.6 138 36.2
PSO461G0078 Papaver somniferum HOM05D001789 ORTHO05D001755 1.3e-12 78.2 198 33.8
PSO675G3889 Papaver somniferum HOM05D001789 ORTHO05D001755 1.3e-12 78.2 121 42.1
PSO063G6555 Papaver somniferum HOM05D001789 ORTHO05D001755 1.8e-12 77.8 94 44.7
PSO339G2779 Papaver somniferum HOM05D001944 ORTHO05D002405 1.8e-12 77.8 96 47.9
PSO782G1762 Papaver somniferum HOM05D001789 ORTHO05D001755 1.8e-12 77.8 94 43.6
PSO782G4460 Papaver somniferum HOM05D001789 ORTHO05D001755 1.8e-12 77.8 141 34.0
PSO782G4634 Papaver somniferum HOM05D001789 ORTHO05D001755 2.3e-12 77.4 141 34.0
PSO782G0719 Papaver somniferum HOM05D001789 ORTHO05D001755 3.0e-12 77.0 100 46.0
CSS0016190 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 5.1e-12 76.3 141 34.8
PSO384G2589 Papaver somniferum HOM05D001789 ORTHO05D001755 5.1e-12 76.3 119 42.0
Os12g0636100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 6.7e-12 75.9 119 37.8
PSO017G0041 Papaver somniferum HOM05D001789 ORTHO05D001755 6.7e-12 75.9 130 36.2
PSO339G0965 Papaver somniferum HOM05D001789 ORTHO05D001755 6.7e-12 75.9 141 38.3
PSO675G7970 Papaver somniferum HOM05D001789 ORTHO05D001755 6.7e-12 75.9 138 37.0
Sabra05G0168200 Salix brachista HOM05D001789 ORTHO05D001755 6.7e-12 75.9 90 46.7
Aqoxy2G03556 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 8.7e-12 75.5 130 39.2
Cc02_g30810 Coffea canephora HOM05D001789 ORTHO05D001755 8.7e-12 75.5 141 32.6
Gohir.A13G169500 Gossypium hirsutum HOM05D001789 ORTHO05D001755 8.7e-12 75.5 141 34.0
PSO017G5894 Papaver somniferum HOM05D001789 ORTHO05D001755 8.7e-12 75.5 148 35.1
PSO478G4963 Papaver somniferum HOM05D001789 ORTHO05D001755 8.7e-12 75.5 67 52.2
ATR0665G154 Amborella trichopoda HOM05D001789 ORTHO05D001755 2.5e-11 73.9 100 41.0
PSO210G6779 Papaver somniferum HOM05D001789 ORTHO05D001755 2.5e-11 73.9 87 41.4
CAN.G134.82 Capsicum annuum HOM05D001789 ORTHO05D001755 3.3e-11 73.6 120 38.3
Gohir.D13G175000 Gossypium hirsutum HOM05D001789 ORTHO05D001755 3.3e-11 73.6 141 34.0
Gorai.013G200300 Gossypium raimondii HOM05D001789 ORTHO05D001755 3.3e-11 73.6 141 33.3
Os02g0492900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.3e-11 73.6 83 43.4
Peaxi162Scf00282g00618 Petunia axillaris HOM05D001789 ORTHO05D001755 3.3e-11 73.6 117 35.9
PSO675G3762 Papaver somniferum HOM05D012871 ORTHO05D302183 4.3e-11 73.2 62 66.1
MD04G1226000 Malus domestica HOM05D001789 ORTHO05D001755 7.4e-11 72.4 124 36.3
PSO384G2359 Papaver somniferum HOM05D001789 ORTHO05D001755 7.4e-11 72.4 132 41.7
PSO675G8957 Papaver somniferum HOM05D001789 ORTHO05D001755 7.4e-11 72.4 131 35.9
CiPaw.07G068600 Carya illinoinensis HOM05D001789 ORTHO05D001755 9.6e-11 72.0 95 41.1
Lsat_1_v5_gn_2_64421 Lactuca sativa HOM05D001789 ORTHO05D001755 1.3e-10 71.6 117 36.8
Os03g0679800 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.3e-10 71.6 88 44.3
PSO732G0719 Papaver somniferum HOM05D001944 ORTHO05D002405 1.3e-10 71.6 107 44.9
PSO675G7498 Papaver somniferum HOM05D001944 ORTHO05D002405 2.8e-10 70.5 96 44.8
Ah.06g192110 Amaranthus hybridus HOM05D001789 ORTHO05D001755 3.7e-10 70.1 145 32.4
PSO210G1126 Papaver somniferum HOM05D001789 ORTHO05D001755 3.7e-10 70.1 141 33.3
PSO675G2689 Papaver somniferum HOM05D001789 ORTHO05D001755 3.7e-10 70.1 140 35.7
PSO339G1621 Papaver somniferum HOM05D000176 ORTHO05D000106 4.8e-10 69.7 48 77.1
PSO384G4611 Papaver somniferum HOM05D001789 ORTHO05D001755 4.8e-10 69.7 78 47.4
PSO478G4273 Papaver somniferum HOM05D001789 ORTHO05D001755 4.8e-10 69.7 99 42.4
MBI11_g36864_MAGBIO Magnolia biondii HOM05D001789 ORTHO05D001755 6.2e-10 69.3 111 38.7
PSO017G4820 Papaver somniferum HOM05D001789 ORTHO05D001755 6.2e-10 69.3 128 37.5
Cpa.g.sc617.3 Carica papaya HOM05D001789 ORTHO05D001755 1.1e-09 68.6 82 41.5
PSO017G6475 Papaver somniferum HOM05D001944 ORTHO05D002405 1.1e-09 68.6 95 47.4
PSO210G1391 Papaver somniferum HOM05D000176 ORTHO05D000106 1.1e-09 68.6 47 72.3
PSO541G1109 Papaver somniferum HOM05D012871 ORTHO05D303388 1.1e-09 68.6 48 75.0
PSO017G6666 Papaver somniferum HOM05D012871 ORTHO05D000190 1.8e-09 67.8 46 73.9
PSO384G1822 Papaver somniferum HOM05D001944 ORTHO05D002405 1.8e-09 67.8 101 43.6
COL.COLO4_15370 Corchorus olitorius HOM05D001789 ORTHO05D001755 3.1e-09 67.0 80 43.8
RcHm_v2.0_Chr3g0450651 Rosa chinensis HOM05D001789 ORTHO05D001755 3.1e-09 67.0 118 40.7
Sc15g0002530 Simmondsia chinensis HOM05D001789 ORTHO05D001755 3.1e-09 67.0 82 42.7
PSO135G0159 Papaver somniferum HOM05D012871 ORTHO05D303348 4.0e-09 66.6 47 72.3
PSO782G2796 Papaver somniferum HOM05D012871 ORTHO05D000106 4.0e-09 66.6 49 73.5
Potri.005G219201 Populus trichocarpa HOM05D001789 ORTHO05D001755 4.0e-09 66.6 72 50.0
SalBow4G0844 Salvia bowleyana HOM05D001789 ORTHO05D001755 4.0e-09 66.6 97 37.1
SEGI_21200 Sequoiadendron giganteum HOM05D001789 ORTHO05D001755 4.0e-09 66.6 92 43.5
ClCG02G016750 Citrullus lanatus HOM05D001789 ORTHO05D001755 5.3e-09 66.2 82 39.0
Cc01_g18750 Coffea canephora HOM05D001789 ORTHO05D001755 5.3e-09 66.2 142 38.0
Oeu016446.1 Olea europaea HOM05D001789 ORTHO05D000116 6.9e-09 65.9 72 47.2
PSO017G2708 Papaver somniferum HOM05D001789 ORTHO05D001755 6.9e-09 65.9 80 45.0
Os03g0680400 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 9.0e-09 65.5 143 34.3
PSO210G7627 Papaver somniferum HOM05D000138 ORTHO05D000078 9.0e-09 65.5 48 70.8
PSO832G3911 Papaver somniferum HOM05D001789 ORTHO05D001755 9.0e-09 65.5 105 41.9
TAR365G0302 Trochodendron aralioides HOM05D001789 ORTHO05D001755 9.0e-09 65.5 122 36.9
Os02g0492000 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.5e-08 64.7 69 47.8
SalBow4G2090 Salvia bowleyana HOM05D001789 ORTHO05D001755 1.5e-08 64.7 97 37.1
SalBow6G6302 Salvia bowleyana HOM05D001789 ORTHO05D001755 1.5e-08 64.7 78 43.6
PSO017G2415 Papaver somniferum HOM05D001789 ORTHO05D001755 2.0e-08 64.3 102 38.2
Os01g0171100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.6e-08 63.9 115 34.8
Os03g0680600 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.6e-08 63.9 84 41.7
PSO017G5648 Papaver somniferum HOM05D000176 ORTHO05D000106 2.6e-08 63.9 47 74.5
PSO339G6309 Papaver somniferum HOM05D001789 ORTHO05D001755 2.6e-08 63.9 179 29.1
SalBow4G2708 Salvia bowleyana HOM05D001789 ORTHO05D001755 2.6e-08 63.9 97 37.1
Manes.09G151500 Manihot esculenta HOM05D001789 ORTHO05D001755 3.4e-08 63.5 102 36.3
PSO017G4575 Papaver somniferum HOM05D001789 ORTHO05D001755 3.4e-08 63.5 128 37.5
PSO675G2961 Papaver somniferum HOM05D001789 ORTHO05D001755 3.4e-08 63.5 160 38.8
Os03g0680100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 5.8e-08 62.8 87 41.4
PSO170G5465 Papaver somniferum HOM05D000176 ORTHO05D000106 5.8e-08 62.8 49 69.4
PSO675G3161 Papaver somniferum HOM05D001789 ORTHO05D001755 5.8e-08 62.8 142 32.4
Psat4g049680 Pisum sativum HOM05D001789 ORTHO05D001755 5.8e-08 62.8 82 41.5
SalBow4G2988 Salvia bowleyana HOM05D001789 ORTHO05D001755 5.8e-08 62.8 147 28.6
Os12g0634900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 7.6e-08 62.4 84 39.3
SalBow4G2706 Salvia bowleyana HOM05D001789 ORTHO05D001755 7.6e-08 62.4 97 35.1
Ciclev10028402m.g Citrus clementina HOM05D001789 ORTHO05D001755 9.9e-08 62.0 67 43.3
Os02g0493050 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.3e-07 61.6 74 44.6
PSO339G3442 Papaver somniferum HOM05D001789 ORTHO05D001755 1.3e-07 61.6 73 45.2
Aqoxy7G03203 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 1.7e-07 61.2 146 34.2
Os02g0493300 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.7e-07 61.2 116 31.9
PSO017G4312 Papaver somniferum HOM05D001789 ORTHO05D001755 1.7e-07 61.2 103 39.8
Prupe.6G344800 Prunus persica HOM05D001789 ORTHO05D001755 1.7e-07 61.2 68 44.1
AUR62011929 Chenopodium quinoa HOM05D001789 ORTHO05D001755 2.2e-07 60.8 113 38.1
PGR004G2017 Punica granatum HOM05D001789 ORTHO05D001755 2.2e-07 60.8 75 48.0
PSO478G2547 Papaver somniferum HOM05D012871 ORTHO05D000106 2.9e-07 60.5 49 69.4
vmacro13812 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 2.9e-07 60.5 67 44.8
Os01g0189100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.8e-07 60.1 172 33.1
Rhsim07G0074300 Rhododendron simsii HOM05D001789 ORTHO05D001755 3.8e-07 60.1 68 42.6
Aqoxy4G01760 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 4.9e-07 59.7 81 42.0
COL.COLO4_05094 Corchorus olitorius HOM05D001789 ORTHO05D001755 4.9e-07 59.7 82 42.7
ECA238G2814 Erigeron canadensis HOM05D001789 ORTHO05D001755 4.9e-07 59.7 94 38.3
Lju50C34T11 Lonicera japonica HOM05D001789 ORTHO05D001755 4.9e-07 59.7 87 35.6
CANSAT54G0997 Cannabis sativa HOM05D001789 ORTHO05D001755 6.4e-07 59.3 68 44.1
Duzib128G1133 Durio zibethinus HOM05D001789 ORTHO05D001755 8.4e-07 58.9 80 40.0
Eucgr.H04321 Eucalyptus grandis HOM05D001789 ORTHO05D001755 8.4e-07 58.9 94 37.2
PSO063G3347 Papaver somniferum HOM05D001789 ORTHO05D001755 8.4e-07 58.9 78 42.3
PSO447G0028 Papaver somniferum HOM05D012871 ORTHO05D303410 8.4e-07 58.9 39 76.9
MSTRG.20457 Avicennia marina HOM05D001789 ORTHO05D001755 1.1e-06 58.5 126 31.7
Nitab4.5_0006088g0040 Nicotiana tabacum HOM05D001789 ORTHO05D001755 1.1e-06 58.5 82 37.8
Os09g0124100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.1e-06 58.5 88 40.9
Zm00001eb034120 Zea mays HOM05D001789 ORTHO05D001755 1.1e-06 58.5 89 37.1
Nitab4.5_0009495g0030 Nicotiana tabacum HOM05D001789 ORTHO05D001755 1.9e-06 57.8 67 43.3
Thecc.05G281000 Theobroma cacao HOM05D001789 ORTHO05D001755 1.9e-06 57.8 59 45.8
Migut.B01098 Erythranthe guttata HOM05D001789 ORTHO05D001755 2.5e-06 57.4 121 31.4
Manes.08G136000 Manihot esculenta HOM05D001789 ORTHO05D001755 2.5e-06 57.4 67 41.8
Os03g0680300 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.5e-06 57.4 119 36.1
Aqoxy2G03554 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 3.2e-06 57.0 59 47.5
BcaB04g21349 Brassica carinata HOM05D001789 ORTHO05D001755 4.2e-06 56.6 71 43.7
BNapus_Darmor_BZH_scaffold_78p00990 Brassica napus HOM05D001789 ORTHO05D001755 4.2e-06 56.6 71 43.7
BraA01t04507Z Brassica rapa HOM05D001789 ORTHO05D001755 4.2e-06 56.6 71 43.7
COL.COLO4_08283 Corchorus olitorius HOM05D001789 ORTHO05D001755 4.2e-06 56.6 84 40.5
BcaB04g19305 Brassica carinata HOM05D001789 ORTHO05D001755 5.5e-06 56.2 88 38.6
MELO3C004392.2 Cucumis melo HOM05D001789 ORTHO05D001755 5.5e-06 56.2 68 39.7
FvH4_6g02680 Fragaria vesca HOM05D001789 ORTHO05D001755 5.5e-06 56.2 64 46.9
PSO339G0875 Papaver somniferum HOM05D001789 ORTHO05D001755 5.5e-06 56.2 160 30.0
AL3G14790 Arabidopsis lyrata HOM05D001789 ORTHO05D001755 7.1e-06 55.8 72 41.7
CsaV3_2G003990 Cucumis sativus L. HOM05D001789 ORTHO05D001755 7.1e-06 55.8 67 40.3
FAN02G1989 Fragaria x ananassa HOM05D001789 ORTHO05D001755 7.1e-06 55.8 64 45.3
FAN09G2804 Fragaria x ananassa HOM05D001789 ORTHO05D001755 7.1e-06 55.8 64 45.3
Migut.D00382 Erythranthe guttata HOM05D001789 ORTHO05D001755 9.3e-06 55.5 67 43.3
SGA_v2.0_scaffold36G14395 Striga asiatica HOM05D001789 ORTHO05D001755 9.3e-06 55.5 58 46.6


User provided reference genes

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