Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 6.1e-242 840.9 596 100.0
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 5.6e-235 817.8 596 95.0
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 5.6e-235 817.8 596 92.8
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 9.3e-182 641.0 469 100.0
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 5.9e-160 568.5 581 65.2
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 3.9e-148 529.3 573 63.2
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 5.2e-148 528.9 580 62.1
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 4.8e-146 522.3 580 58.6
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 6.5e-143 511.9 584 61.6
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.9e-142 510.4 575 60.5
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 5.5e-142 508.8 580 59.0
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 2.1e-141 506.9 597 57.8
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 1.4e-140 504.2 575 60.5
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 9.7e-139 498.0 579 57.7
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 2.2e-138 496.9 579 59.8
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 3.7e-138 496.1 579 59.4
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 4.1e-137 492.7 574 59.1
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 1.6e-136 490.7 506 60.7
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 1.0e-135 488.0 572 58.7
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 1.7e-135 487.3 581 57.8
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 2.2e-135 486.9 579 57.2
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 2.9e-135 486.5 572 58.4
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 5.0e-135 485.7 565 59.8
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 4.2e-134 482.6 583 58.8
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 1.2e-133 481.1 574 55.4
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 6.1e-133 478.8 582 58.8
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 8.0e-133 478.4 582 57.2
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 8.8e-132 474.9 495 62.8
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 7.5e-131 471.9 580 57.4
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 2.8e-130 469.9 578 55.7
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 8.3e-130 468.4 575 55.5
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.8e-129 467.2 500 62.0
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.8e-129 467.2 572 58.7
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 1.8e-129 467.2 572 56.1
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 2.4e-129 466.8 570 56.3
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 2.4e-129 466.8 570 56.3
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 2.4e-129 466.8 574 55.4
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 4.1e-129 466.1 498 62.4
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 5.4e-129 465.7 584 53.8
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 1.2e-128 464.5 578 56.6
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 7.7e-128 461.8 554 57.6
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 7.7e-128 461.8 511 58.7
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 1.0e-127 461.5 501 58.7
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 1.7e-127 460.7 506 62.6
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 3.8e-127 459.5 568 57.2
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 6.6e-127 458.8 575 54.4
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 3.3e-126 456.4 571 57.3
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 5.5e-126 455.7 517 56.1
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 1.2e-125 454.5 571 53.2
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 1.6e-125 454.1 497 57.5
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 2.1e-125 453.8 575 56.0
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 1.8e-124 450.7 575 56.0
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 1.8e-124 450.7 577 48.7
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 3.0e-124 449.9 608 54.1
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 4.0e-124 449.5 575 54.6
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 5.2e-124 449.1 585 57.4
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 1.2e-123 448.0 573 56.2
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 2.6e-123 446.8 574 57.0
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 4.4e-123 446.0 575 56.2
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 5.7e-123 445.7 671 51.1
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 7.5e-123 445.3 569 56.9
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 1.3e-122 444.5 464 64.2
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.7e-122 444.1 602 50.2
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 6.3e-122 442.2 563 58.6
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 1.4e-121 441.0 579 52.3
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 2.4e-121 440.3 575 55.7
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 2.3e-119 433.7 619 52.2
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 1.5e-118 431.0 576 53.6
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 1.9e-118 430.6 608 51.8
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 7.3e-118 428.7 503 59.4
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 2.3e-116 423.7 524 58.4
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 4.0e-116 422.9 302 74.8
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 5.4e-113 412.5 304 74.0
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 1.6e-112 411.0 571 53.8
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 1.3e-111 407.9 533 55.5
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 1.7e-111 407.5 618 45.5
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 5.0e-111 406.0 445 62.7
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 5.0e-111 406.0 303 74.3
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 8.6e-111 405.2 575 47.8
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 3.6e-109 399.8 303 70.6
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 8.0e-109 398.7 546 49.3
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 5.8e-107 392.5 512 51.0
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 1.3e-106 391.3 577 47.3
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 1.3e-106 391.3 573 46.8
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 1.7e-106 391.0 606 43.9
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 2.2e-106 390.6 538 53.2
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.1e-105 388.3 568 46.7
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 1.5e-102 377.9 605 44.1
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 8.1e-101 372.1 607 53.2
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 8.9e-100 368.6 573 53.8
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 1.5e-99 367.9 574 50.5
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 1.5e-99 367.9 500 57.8
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 2.0e-99 367.5 505 57.8
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 1.3e-98 364.8 573 51.1
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 4.9e-98 362.8 573 52.4
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 1.1e-97 361.7 573 51.0
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 1.1e-97 361.7 573 51.0
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 1.9e-97 360.9 448 56.7
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 7.8e-96 355.5 488 55.9
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 2.4e-92 344.0 526 46.0
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 6.4e-90 335.9 495 50.7
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 6.4e-82 309.3 231 70.6
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 8.4e-82 308.9 456 51.1
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 1.1e-78 298.5 191 83.2
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 3.4e-75 287.0 189 78.3
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 3.2e-73 280.4 194 73.7
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 1.3e-61 241.9 297 50.2
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 8.2e-61 239.2 222 58.1
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 5.3e-60 236.5 390 53.3
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 6.9e-60 236.1 211 58.8
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 5.0e-58 229.9 224 56.7
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 5.5e-57 226.5 243 51.9
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 2.2e-53 214.5 297 44.4
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 9.0e-52 209.1 217 54.8
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 1.2e-51 208.8 255 49.0
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 1.5e-43 181.8 170 58.8
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 4.5e-43 180.3 222 50.5
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 3.8e-42 177.2 209 48.8
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 4.2e-41 173.7 238 44.5
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 6.7e-39 166.4 205 47.3
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 9.1e-36 156.0 301 38.2
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 7.2e-33 146.4 105 74.3
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.7e-29 135.2 151 49.7
Psat0s1762g0040 Pisum sativum HOM05D004479 ORTHO05D005597 2.9e-26 124.4 192 42.2
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 4.2e-25 120.6 206 40.3
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 1.4e-23 115.5 65 84.6
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 1.5e-22 112.1 162 50.6
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 5.4e-20 103.6 91 60.4
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 1.2e-19 102.4 68 77.9
QL05p046913 Quercus lobata HOM05D004479 ORTHO05D005597 3.5e-19 100.9 115 55.7
Psat0s1227g0080 Pisum sativum HOM05D000020 ORTHO05D015801 7.2e-17 93.2 86 61.6
SHI24407 Sapria himalayana HOM05D004479 ORTHO05D005597 1.8e-15 88.6 180 41.1
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 1.5e-14 85.5 133 44.4
Psat0s2660g0040 Pisum sativum HOM05D000020 ORTHO05D015801 4.4e-14 84.0 81 58.0
Psat7g008520 Pisum sativum HOM05D004479 ORTHO05D005597 4.4e-14 84.0 76 60.5
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 4.1e-12 77.4 152 36.2
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 1.2e-11 75.9 68 60.3
COL.COLO4_31578 Corchorus olitorius HOM05D001810 ORTHO05D005662 7.7e-11 73.2 206 33.0
SHI31116 Sapria himalayana HOM05D004479 ORTHO05D005597 7.7e-11 73.2 46 71.7
Hma1.2p1_0370F.1_g138010 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 2.3e-10 71.6 50 76.0
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 3.8e-10 70.9 126 42.1
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 1.1e-09 69.3 39 82.1
C09p24010 Brassica napus HOM05D002960 ORTHO05D042139 1.1e-09 69.3 39 82.1
BolC9t55321H Brassica oleracea HOM05D002960 ORTHO05D042139 1.1e-09 69.3 39 82.1
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 1.1e-09 69.3 249 30.9
Psat3g175600 Pisum sativum HOM05D004479 ORTHO05D005597 2.5e-09 68.2 70 51.4
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 9.5e-09 66.2 42 78.6
Haze_18674 Corylus avellana HOM05D004479 ORTHO05D005597 1.6e-08 65.5 40 77.5
SHI42976 Sapria himalayana HOM05D004479 ORTHO05D005597 2.1e-08 65.1 115 40.0
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 2.8e-08 64.7 44 68.2
QL08p038027 Quercus lobata HOM05D004479 ORTHO05D337893 8.0e-08 63.2 197 31.5
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 1.0e-07 62.8 110 39.1
COL.COLO4_27264 Corchorus olitorius HOM05D004479 ORTHO05D005597 1.4e-07 62.4 68 44.1
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 1.4e-07 62.4 69 53.6
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 5.2e-07 60.5 113 39.8
COL.COLO4_18371 Corchorus olitorius HOM05D004479 ORTHO05D005597 8.9e-07 59.7 68 45.6
BcaC02g11491 Brassica carinata HOM05D019637 ORTHO05D018695 1.5e-06 58.9 40 77.5
C04p14790 Brassica napus HOM05D004479 ORTHO05D018695 1.5e-06 58.9 40 77.5
BolC4t23053H Brassica oleracea HOM05D004479 ORTHO05D018695 1.5e-06 58.9 40 77.5
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 2.0e-06 58.5 126 40.5
QL03p033134 Quercus lobata HOM05D004479 ORTHO05D005597 2.0e-06 58.5 49 63.3
SHI13126 Sapria himalayana HOM05D000105 ORTHO05D000023 5.7e-06 57.0 44 61.4


User provided reference genes

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