Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 4.0e-87 325.1 210 100.0
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 1.2e-64 250.4 180 97.2
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 4.5e-38 162.2 210 50.5
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 4.2e-36 155.6 212 47.6
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 7.1e-36 154.8 209 48.3
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 1.8e-34 150.2 125 63.2
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.9e-34 149.1 122 64.8
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 2.5e-33 146.4 223 52.0
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 3.1e-31 139.4 120 59.2
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 6.9e-31 138.3 119 61.3
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 9.0e-31 137.9 121 59.5
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 1.2e-30 137.5 120 60.8
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 1.5e-30 137.1 115 62.6
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 2.6e-30 136.3 118 56.8
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 5.8e-30 135.2 120 56.7
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 5.8e-30 135.2 121 57.0
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 1.0e-29 134.4 117 59.0
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 1.3e-29 134.0 117 58.1
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 2.9e-29 132.9 123 54.5
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 2.9e-29 132.9 120 58.3
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 3.8e-29 132.5 127 55.9
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 5.0e-29 132.1 123 55.3
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 8.4e-29 131.3 127 55.9
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 1.4e-28 130.6 121 56.2
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.4e-28 130.6 122 56.6
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 1.4e-28 130.6 122 55.7
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 4.2e-28 129.0 127 55.1
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 4.2e-28 129.0 127 55.1
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 5.5e-28 128.6 120 55.8
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 5.5e-28 128.6 120 55.8
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 9.3e-28 127.9 128 48.4
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.2e-27 127.5 122 54.1
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.2e-27 127.5 122 54.1
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 1.2e-27 127.5 120 54.2
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 3.5e-27 125.9 117 55.6
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 3.5e-27 125.9 120 53.3
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 3.5e-27 125.9 120 53.3
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 3.5e-27 125.9 120 53.3
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 3.5e-27 125.9 120 52.5
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 3.5e-27 125.9 120 53.3
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 4.6e-27 125.6 125 52.8
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 4.6e-27 125.6 123 53.7
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 6.1e-27 125.2 124 53.2
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 7.9e-27 124.8 121 52.9
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 3.9e-26 122.5 120 51.7
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 3.9e-26 122.5 244 37.7
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 5.1e-26 122.1 119 54.6
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 8.7e-26 121.3 125 51.2
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 8.7e-26 121.3 121 49.6
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 1.1e-25 120.9 122 52.5
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 1.5e-25 120.6 120 50.8
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 1.9e-25 120.2 118 50.8
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 4.3e-25 119.0 118 50.8
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 9.7e-25 117.9 122 52.5
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 9.7e-25 117.9 126 51.6
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 1.6e-24 117.1 147 44.9
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 2.2e-24 116.7 120 53.3
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 2.8e-24 116.3 124 51.6
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.8e-24 116.3 123 48.8
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.8e-24 116.3 123 48.8
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 4.1e-23 112.5 125 48.0
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 5.3e-23 112.1 120 50.0
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 6.9e-23 111.7 123 50.4
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 1.2e-22 110.9 83 65.1
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.0e-22 110.2 92 66.3
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 2.6e-22 109.8 119 44.5
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 4.5e-22 109.0 119 45.4
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 6.5e-21 105.1 135 46.7
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 8.5e-21 104.8 81 60.5
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 8.5e-21 104.8 120 46.7
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 1.2e-19 100.9 120 46.7
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 2.7e-19 99.8 235 35.3
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 3.6e-19 99.4 195 34.9
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 4.6e-19 99.0 120 45.8
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 1.0e-18 97.8 98 56.1
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 1.4e-18 97.4 79 62.0
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 1.4e-18 97.4 77 62.3
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 3.0e-18 96.3 120 45.8
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 5.1e-18 95.5 113 49.6
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 5.1e-18 95.5 88 59.1
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 2.5e-17 93.2 76 59.2
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 3.3e-17 92.8 123 48.0
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 2.2e-16 90.1 94 52.1
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 4.8e-16 89.0 98 50.0
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 8.2e-16 88.2 76 51.3
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 1.4e-15 87.4 93 50.5
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.4e-15 86.7 88 50.0
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 5.3e-15 85.5 109 45.0
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 7.7e-14 81.6 78 44.9
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 5.0e-13 79.0 94 43.6
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 3.2e-12 76.3 95 47.4
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 1.2e-11 74.3 113 44.2
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 7.9e-11 71.6 59 57.6
AagrBONN_evm.TU.Sc2ySwM_228.1692 Anthoceros agrestis HOM05D007357 ORTHO05D009314 1.8e-10 70.5 117 31.6
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.0e-10 69.7 59 55.9
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 2.0e-09 67.0 57 54.4
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 4.4e-09 65.9 89 47.2
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 1.4e-07 60.8 98 40.8
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 4.1e-07 59.3 49 57.1
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 4.1e-07 59.3 49 57.1
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 1.5e-06 57.4 78 44.9
Mapoly0002s0137 Marchantia polymorpha HOM05D007357 ORTHO05D009314 4.5e-06 55.8 116 25.9
PGR031G1183 Punica granatum HOM05D007357 ORTHO05D009314 5.9e-06 55.5 48 50.0


User provided reference genes

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