Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0130 Papaver somniferum HOM05D037519 ORTHO05D037279 0.0e+00 1617.8 867 100.0
PSO017G5422 Papaver somniferum HOM05D037519 ORTHO05D037279 0.0e+00 1508.8 873 94.3
PSO017G6249 Papaver somniferum HOM05D037519 ORTHO05D037279 1.7e-67 261.9 659 39.3
TAR636G0994 Trochodendron aralioides HOM05D005839 ORTHO05D005686 1.0e-35 156.4 1036 27.0
TAR636G1565 Trochodendron aralioides HOM05D005839 ORTHO05D005686 3.8e-35 154.5 1038 26.7
Nitab4.5_0000037g0160 Nicotiana tabacum HOM05D005839 ORTHO05D005686 1.0e-19 103.2 961 24.2
Peaxi162Scf00286g00911 Petunia axillaris HOM05D005839 ORTHO05D005686 6.6e-19 100.5 1036 23.8
CAN.G1684.4 Capsicum annuum HOM05D005839 ORTHO05D005686 4.3e-18 97.8 983 23.5
Sopen09g035450 Solanum pennellii HOM05D005839 ORTHO05D005686 2.3e-16 92.0 1000 23.8
Aqoxy2G04047 Aquilegia oxysepala HOM05D005839 ORTHO05D005686 1.7e-14 85.9 1017 24.3
Actinidia28516 Actinidia chinensis HOM05D005839 ORTHO05D005686 2.2e-14 85.5 1013 23.3
TAR365G0636 Trochodendron aralioides HOM05D005839 ORTHO05D005686 1.9e-13 82.4 588 26.0
EL10Ac3g07436 Beta vulgaris HOM05D005839 ORTHO05D005686 1.6e-12 79.3 986 24.4
PGSC0003DMG401021870 Solanum tuberosum HOM05D005839 ORTHO05D005686 4.6e-12 77.8 1041 22.6
Ca_18007_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 6.0e-12 77.4 977 23.8
Ah.04g149590 Amaranthus hybridus HOM05D005839 ORTHO05D005686 1.0e-11 76.6 966 23.6
CANSAT78G1593 Cannabis sativa HOM05D005839 ORTHO05D005686 1.0e-11 76.6 992 24.3
Solyc09g092550.4 Solanum lycopersicum HOM05D005839 ORTHO05D005686 3.0e-11 75.1 991 23.3
Eucgr.H02631 Eucalyptus grandis HOM05D005839 ORTHO05D005686 5.1e-11 74.3 1029 23.6
Glyma.08G107100 Glycine max HOM05D005839 ORTHO05D005686 1.5e-10 72.8 1102 22.5
QL06p027171 Quercus lobata HOM05D005839 ORTHO05D005686 2.5e-10 72.0 1129 23.9
Haze_11680 Corylus avellana HOM05D005839 ORTHO05D005686 1.6e-09 69.3 709 25.7
Hma1.2p1_1457F.1_g284680 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 1.6e-09 69.3 317 30.6
Duzib151G0277 Durio zibethinus HOM05D005839 ORTHO05D005686 2.1e-09 68.9 326 27.3
Sabra14G0109900 Salix brachista HOM05D005839 ORTHO05D005686 2.3e-08 65.5 775 24.1
Thecc.04G191800 Theobroma cacao HOM05D005839 ORTHO05D005686 2.3e-08 65.5 1112 22.5
Oeu049072.1 Olea europaea HOM05D005839 ORTHO05D005686 3.1e-08 65.1 952 23.4
Hund19024 Selenicereus undatus HOM05D005839 ORTHO05D005686 3.1e-08 65.1 951 23.6
Migut.G00951 Erythranthe guttata HOM05D005839 ORTHO05D005686 4.0e-08 64.7 485 25.4
Psat7g076360 Pisum sativum HOM05D005839 ORTHO05D005686 6.8e-08 63.9 258 29.5
Hma1.2p1_0984F.1_g244280 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 8.9e-08 63.5 310 30.6
PGSC0003DMG400021878 Solanum tuberosum HOM05D005839 ORTHO05D005686 1.2e-07 63.2 250 31.2
CiPaw.01G113800 Carya illinoinensis HOM05D005839 ORTHO05D005686 3.4e-07 61.6 781 25.4
MD04G1021500 Malus domestica HOM05D005839 ORTHO05D005686 3.4e-07 61.6 1035 23.9
arahy.Tifrunner.gnm1.ann1.3YD71H Arachis hypogaea HOM05D005839 ORTHO05D005686 5.8e-07 60.8 1125 21.7
arahy.Tifrunner.gnm1.ann1.Q2NVSC Arachis hypogaea HOM05D005839 ORTHO05D000011 5.8e-07 60.8 103 35.0
FvH4_1g13820 Fragaria vesca HOM05D005839 ORTHO05D005686 5.8e-07 60.8 55 49.1
FAN22G0032 Fragaria x ananassa HOM05D005839 ORTHO05D005686 5.8e-07 60.8 326 27.9
Lj6g0025267 Lotus japonicus HOM05D005839 ORTHO05D005686 5.8e-07 60.8 40 55.0
QL06p027203 Quercus lobata HOM05D034196 ORTHO05D005686 7.6e-07 60.5 35 71.4
arahy.Tifrunner.gnm1.ann1.52QBHW Arachis hypogaea HOM05D005839 ORTHO05D005686 9.9e-07 60.1 199 29.6
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 9.9e-07 60.1 200 27.5
Dinv32166 Davidia involucrata HOM05D005839 ORTHO05D005686 1.3e-06 59.7 754 25.2
RcHm_v2.0_Chr4g0412531 Rosa chinensis HOM05D005839 ORTHO05D005686 1.3e-06 59.7 434 24.7
Cpa.g.sc157.18 Carica papaya HOM05D005839 ORTHO05D005686 1.7e-06 59.3 86 41.9
BcaC01g00210 Brassica carinata HOM05D010750 ORTHO05D005686 2.9e-06 58.5 40 55.0
BolC3t19949H Brassica oleracea HOM05D010750 ORTHO05D005686 2.9e-06 58.5 40 55.0
CSS0003065 Camellia sinensis var. sinensis HOM05D005839 ORTHO05D005686 2.9e-06 58.5 1033 23.4
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 2.9e-06 58.5 1001 22.0
arahy.Tifrunner.gnm1.ann1.CIA2YT Arachis hypogaea HOM05D005839 ORTHO05D005686 4.9e-06 57.8 61 44.3
AUR62018535 Chenopodium quinoa HOM05D005839 ORTHO05D005686 8.4e-06 57.0 1049 22.6


User provided reference genes

Program Settings