Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 7.0e-133 477.2 235 100.0
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 1.1e-112 410.2 235 86.4
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.9e-90 336.3 223 71.7
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 2.8e-89 332.4 235 69.4
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 3.6e-89 332.0 235 69.8
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 3.1e-88 328.9 235 69.8
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 9.9e-87 323.9 218 69.7
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 2.2e-86 322.8 234 67.9
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 3.2e-85 318.9 233 67.0
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 5.5e-85 318.2 235 63.4
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 5.5e-85 318.2 234 67.1
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 7.1e-85 317.8 244 65.6
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.6e-84 316.6 233 65.2
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 2.1e-84 316.2 235 65.5
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 2.3e-83 312.8 234 66.2
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 6.7e-83 311.2 235 64.7
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 6.7e-83 311.2 233 64.8
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 8.7e-83 310.8 221 67.0
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 8.7e-83 310.8 223 66.4
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 1.1e-82 310.5 235 63.8
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 1.5e-82 310.1 232 65.1
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 4.3e-82 308.5 234 64.5
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 7.4e-82 307.8 233 63.5
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 7.4e-82 307.8 235 63.8
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 3.7e-81 305.4 223 65.0
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 1.1e-80 303.9 237 62.0
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.1e-80 303.9 234 63.7
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.8e-80 303.1 234 63.2
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 3.1e-80 302.4 266 56.8
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 4.0e-80 302.0 237 62.4
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 4.0e-80 302.0 235 62.1
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 5.3e-80 301.6 213 66.2
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 6.9e-80 301.2 237 61.2
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 9.0e-80 300.8 234 62.8
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.5e-79 300.1 233 63.1
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.0e-79 299.7 237 62.4
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 2.6e-79 299.3 232 61.2
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 2.6e-79 299.3 232 63.8
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 2.6e-79 299.3 216 66.7
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 2.6e-79 299.3 266 56.4
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 3.4e-79 298.9 234 62.4
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 4.5e-79 298.5 217 65.9
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 4.5e-79 298.5 234 60.3
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 5.8e-79 298.1 217 65.9
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 5.8e-79 298.1 232 61.2
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 1.0e-78 297.4 216 67.1
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 1.3e-78 297.0 228 62.7
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 2.2e-78 296.2 217 66.8
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 6.5e-78 294.7 232 61.2
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 9.3e-77 290.8 213 66.2
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 6.0e-76 288.1 234 59.4
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 7.9e-76 287.7 237 61.2
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 1.0e-75 287.3 216 62.5
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.3e-75 287.0 235 60.0
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 3.0e-75 285.8 232 59.9
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 3.9e-75 285.4 299 51.5
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 8.7e-75 284.3 190 69.5
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 1.5e-74 283.5 234 59.8
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 2.1e-73 279.6 218 61.9
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 2.8e-73 279.3 217 61.8
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 8.2e-73 277.7 210 63.8
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 1.1e-72 277.3 232 59.9
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 2.6e-71 272.7 209 63.6
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 2.6e-71 272.7 209 63.6
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 4.5e-71 271.9 214 63.6
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 5.9e-71 271.6 232 59.5
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.0e-70 270.8 233 58.8
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 1.7e-70 270.0 229 59.4
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 6.5e-70 268.1 235 58.3
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 1.1e-69 267.3 203 63.1
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 3.2e-69 265.8 234 59.8
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 3.2e-69 265.8 206 62.1
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 1.6e-68 263.5 206 61.7
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 2.7e-68 262.7 216 61.6
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 3.5e-68 262.3 218 58.3
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 3.0e-67 259.2 203 62.6
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 3.0e-67 259.2 203 62.6
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 1.9e-66 256.5 203 61.6
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 5.7e-66 255.0 203 61.6
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 5.7e-66 255.0 203 61.6
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 7.4e-66 254.6 203 61.6
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 3.7e-65 252.3 253 53.0
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 1.1e-64 250.8 231 55.4
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 1.1e-64 250.8 214 57.9
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 3.4e-63 245.7 143 86.0
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 1.9e-61 240.0 224 53.6
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.0e-59 234.2 217 53.9
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 3.7e-57 225.7 217 50.7
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 4.8e-57 225.3 229 48.5
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 6.3e-57 224.9 233 53.2
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.3e-54 217.2 216 54.6
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 2.3e-51 206.5 145 68.3
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 8.8e-51 204.5 146 68.5
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 3.3e-50 202.6 144 70.8
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 9.7e-50 201.1 192 50.5
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.7e-46 190.3 145 63.4
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 5.0e-46 188.7 199 44.7
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 4.2e-45 185.7 145 64.1
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 4.8e-41 172.2 120 66.7
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 1.8e-40 170.2 122 63.9
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.1e-37 161.0 143 53.1
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 4.4e-26 122.5 94 57.4
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 8.6e-22 108.2 90 58.9
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 3.3e-13 79.7 74 50.0


User provided reference genes

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