Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0058 Papaver somniferum HOM05D004322 ORTHO05D005033 1.6e-109 399.4 198 100.0
PSO782G1933 Papaver somniferum HOM05D004322 ORTHO05D005033 4.7e-106 387.9 198 97.5
Nn5g28787 Nelumbo nucifera HOM05D004322 ORTHO05D005033 7.1e-86 320.9 198 77.8
TAR376G0532 Trochodendron aralioides HOM05D004322 ORTHO05D005033 1.0e-84 317.0 198 77.3
Aqoxy5G02055 Aquilegia oxysepala HOM05D004322 ORTHO05D005033 8.7e-84 313.9 198 74.2
Phvul.006G211500 Phaseolus vulgaris HOM05D004322 ORTHO05D005033 1.5e-83 313.2 198 75.3
TWI14G0809 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 3.3e-83 312.0 198 75.8
Atru.chr6.1013_Atru.chr6.1014 Acer truncatum HOM05D004322 ORTHO05D005033 4.3e-83 311.6 198 76.3
GSVIVG01029694001 Vitis vinifera HOM05D004322 ORTHO05D005033 1.3e-82 310.1 198 75.3
Glyma.15G048900 Glycine max HOM05D004322 ORTHO05D005033 4.8e-82 308.1 198 74.2
Glyma.08G183900 Glycine max HOM05D004322 ORTHO05D005033 6.2e-82 307.8 198 74.2
VMungo0251G0859 Vigna mungo HOM05D004322 ORTHO05D005033 8.1e-82 307.4 198 73.7
Manes.10G133500 Manihot esculenta HOM05D004322 ORTHO05D005033 1.4e-81 306.6 198 73.7
Actinidia39064 Actinidia chinensis HOM05D004322 ORTHO05D005033 1.8e-81 306.2 198 74.7
CiPaw.05G042000 Carya illinoinensis HOM05D004322 ORTHO05D005033 5.3e-81 304.7 198 73.2
RcHm_v2.0_Chr7g0223291 Rosa chinensis HOM05D004322 ORTHO05D005033 1.5e-80 303.1 198 72.2
CANSAT11G1833 Cannabis sativa HOM05D004322 ORTHO05D005033 7.6e-80 300.8 198 71.7
TWI23G0630 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 2.2e-79 299.3 198 72.7
TWI23G1123 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 2.2e-79 299.3 198 72.7
MD15G1419900 Malus domestica HOM05D004322 ORTHO05D005033 2.9e-79 298.9 198 71.7
arahy.Tifrunner.gnm1.ann1.1NY3A5 Arachis hypogaea HOM05D004322 ORTHO05D005033 6.4e-79 297.7 198 71.7
Dinv24253 Davidia involucrata HOM05D004322 ORTHO05D005033 1.9e-78 296.2 198 73.2
Prupe.1G564800 Prunus persica HOM05D004322 ORTHO05D005033 1.9e-78 296.2 198 71.2
arahy.Tifrunner.gnm1.ann1.H25YH4 Arachis hypogaea HOM05D004322 ORTHO05D005033 2.4e-78 295.8 198 71.7
BcaB02g08633 Brassica carinata HOM05D004322 ORTHO05D005033 2.4e-78 295.8 198 69.7
COL.COLO4_07504 Corchorus olitorius HOM05D004322 ORTHO05D005033 2.4e-78 295.8 198 71.7
Lj6g0010196 Lotus japonicus HOM05D004322 ORTHO05D005033 3.2e-78 295.4 198 71.7
PGR042G3064 Punica granatum HOM05D004322 ORTHO05D005033 4.2e-78 295.0 198 70.2
Thecc.03G241900 Theobroma cacao HOM05D004322 ORTHO05D005033 7.1e-78 294.3 198 72.7
Aqoxy5G01565 Aquilegia oxysepala HOM05D004322 ORTHO05D005033 1.6e-77 293.1 198 70.2
ECA240G2745 Erigeron canadensis HOM05D004322 ORTHO05D005033 1.6e-77 293.1 198 70.2
FvH4_5g29770 Fragaria vesca HOM05D004322 ORTHO05D005033 1.6e-77 293.1 198 68.7
BcaC02g09358 Brassica carinata HOM05D004322 ORTHO05D005033 2.1e-77 292.7 198 69.2
C04p41720 Brassica napus HOM05D004322 ORTHO05D005033 2.1e-77 292.7 198 69.2
ClCG09G014140 Citrullus lanatus HOM05D004322 ORTHO05D005033 2.7e-77 292.4 198 69.7
A04p08040 Brassica napus HOM05D004322 ORTHO05D005033 4.6e-77 291.6 198 69.2
Ca_00095_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 7.9e-77 290.8 198 69.7
Ca_29934_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 7.9e-77 290.8 198 69.7
HanXRQChr03g0066481 Helianthus annuus HOM05D004322 ORTHO05D005033 7.9e-77 290.8 198 68.7
Duzib205G0368 Durio zibethinus HOM05D004322 ORTHO05D005033 1.0e-76 290.4 198 69.7
Gohir.A03G004600 Gossypium hirsutum HOM05D004322 ORTHO05D005033 1.3e-76 290.0 198 70.7
Gohir.D03G167900 Gossypium hirsutum HOM05D004322 ORTHO05D005033 1.3e-76 290.0 198 70.7
Gorai.003G177600 Gossypium raimondii HOM05D004322 ORTHO05D005033 1.3e-76 290.0 198 70.7
Ciclev10002548m.g Citrus clementina HOM05D004322 ORTHO05D005033 3.0e-76 288.9 199 70.9
MSTRG.16544 Avicennia marina HOM05D004322 ORTHO05D005033 5.1e-76 288.1 198 68.7
Potri.001G207900 Populus trichocarpa HOM05D004322 ORTHO05D005033 5.1e-76 288.1 200 71.0
Sp7g11930 Schrenkiella parvula HOM05D004322 ORTHO05D005033 5.1e-76 288.1 198 67.7
Ah.11g045370 Amaranthus hybridus HOM05D004322 ORTHO05D005033 8.7e-76 287.3 198 68.7
EL10Ac2g03233 Beta vulgaris HOM05D004322 ORTHO05D005033 8.7e-76 287.3 200 69.0
Sed0005743 Sechium edule HOM05D004322 ORTHO05D005033 8.7e-76 287.3 198 69.2
MSTRG.5246 Avicennia marina HOM05D004322 ORTHO05D005033 1.1e-75 287.0 198 68.2
PGSC0003DMG400029776 Solanum tuberosum HOM05D004322 ORTHO05D005033 1.1e-75 287.0 198 69.7
AT4G14110 Arabidopsis thaliana HOM05D004322 ORTHO05D005033 3.3e-75 285.4 198 69.2
BcaB04g18113 Brassica carinata HOM05D004322 ORTHO05D005033 3.3e-75 285.4 198 66.2
Migut.N01026 Erythranthe guttata HOM05D004322 ORTHO05D005033 3.3e-75 285.4 198 67.7
HPP92_016157 Vanilla planifolia HOM05D004322 ORTHO05D005033 3.3e-75 285.4 198 68.2
BcaC07g37720 Brassica carinata HOM05D004322 ORTHO05D005033 4.3e-75 285.0 198 66.2
BolC8t48099H Brassica oleracea HOM05D004322 ORTHO05D005033 4.3e-75 285.0 198 66.7
Eucgr.I02706 Eucalyptus grandis HOM05D004322 ORTHO05D005033 4.3e-75 285.0 198 70.2
Thhalv10025920m.g Eutrema salsugineum HOM05D004322 ORTHO05D005033 4.3e-75 285.0 198 67.7
MD08G1227500 Malus domestica HOM05D004322 ORTHO05D005033 4.3e-75 285.0 198 67.7
AUR62018226 Chenopodium quinoa HOM05D004322 ORTHO05D005033 7.3e-75 284.3 198 67.7
Hma1.2p1_0557F.1_g178250 Hydrangea macrophylla HOM05D004322 ORTHO05D005033 7.3e-75 284.3 199 69.8
Medtr2g007840 Medicago truncatula HOM05D004322 ORTHO05D005033 7.3e-75 284.3 198 67.2
CsaV3_6G037290 Cucumis sativus L. HOM05D004322 ORTHO05D005033 9.6e-75 283.9 198 67.2
Duzib084G1309 Durio zibethinus HOM05D004322 ORTHO05D005033 1.3e-74 283.5 198 69.7
FAN08G1384 Fragaria x ananassa HOM05D004322 ORTHO05D005033 1.3e-74 283.5 206 66.0
Solyc01g104600.4 Solanum lycopersicum HOM05D004322 ORTHO05D005033 1.6e-74 283.1 198 69.7
Aa31LG9G3260 Aethionema arabicum HOM05D004322 ORTHO05D005033 2.8e-74 282.3 198 66.7
MELO3C014386.2 Cucumis melo HOM05D004322 ORTHO05D005033 2.8e-74 282.3 198 67.7
BraA08t33032Z Brassica rapa HOM05D004322 ORTHO05D005033 3.6e-74 282.0 198 65.7
FAN18G2629 Fragaria x ananassa HOM05D004322 ORTHO05D005033 3.6e-74 282.0 206 65.5
AL7G42300 Arabidopsis lyrata HOM05D004322 ORTHO05D005033 6.2e-74 281.2 198 67.2
vmacro01793 Vaccinium macrocarpon HOM05D004322 ORTHO05D005033 8.1e-74 280.8 216 66.2
BraA04t16492Z Brassica rapa HOM05D004322 ORTHO05D005033 1.1e-73 280.4 216 63.4
SalBow6G5232 Salvia bowleyana HOM05D004322 ORTHO05D005033 1.1e-73 280.4 234 60.3
FAN04G2215 Fragaria x ananassa HOM05D004322 ORTHO05D005033 1.4e-73 280.0 198 67.7
SalBow6G0151 Salvia bowleyana HOM05D004322 ORTHO05D005033 1.4e-73 280.0 234 59.8
TPR.G19733 Trifolium pratense HOM05D004322 ORTHO05D005033 2.4e-73 279.3 198 68.7
AUR62037741 Chenopodium quinoa HOM05D004322 ORTHO05D005033 4.0e-73 278.5 198 66.2
A08p10330 Brassica napus HOM05D004322 ORTHO05D005033 5.3e-73 278.1 198 65.2
CARHR220130 Cardamine hirsuta HOM05D004322 ORTHO05D005033 6.9e-73 277.7 198 64.6
THA.LOC104804784 Tarenaya hassleriana HOM05D004322 ORTHO05D005033 6.9e-73 277.7 198 64.6
BolC4t25750H Brassica oleracea HOM05D004322 ORTHO05D005033 1.2e-72 276.9 219 62.1
Carub.0007s2831 Capsella rubella HOM05D004322 ORTHO05D005033 1.5e-72 276.6 198 66.2
Lj9A313T47 Lonicera japonica HOM05D004322 ORTHO05D005033 1.5e-72 276.6 170 78.2
BolC3t14638H Brassica oleracea HOM05D004322 ORTHO05D005033 2.0e-72 276.2 198 65.7
FAN13G1883 Fragaria x ananassa HOM05D004322 ORTHO05D005033 9.9e-72 273.9 198 66.2
SGA_v2.0_scaffold145G36061 Striga asiatica HOM05D004322 ORTHO05D005033 9.9e-72 273.9 236 58.9
unitig_62.g23621 Utricularia gibba HOM05D004322 ORTHO05D005033 4.2e-70 268.5 198 66.7
ATR0584G136 Amborella trichopoda HOM05D004322 ORTHO05D005033 9.3e-70 267.3 198 64.6
Peaxi162Scf01807g00011 Petunia axillaris HOM05D004322 ORTHO05D005033 2.7e-69 265.8 233 57.9
Hund13069 Selenicereus undatus HOM05D004322 ORTHO05D005033 2.7e-69 265.8 253 53.8
Cfa015337 Carpinus fangiana HOM05D004322 ORTHO05D005033 1.3e-68 263.5 173 72.8
CDE05G0654 Ceratophyllum demersum HOM05D004322 ORTHO05D005033 1.3e-68 263.5 198 63.6
Sopen01g047110 Solanum pennellii HOM05D004322 ORTHO05D005033 3.9e-68 261.9 241 56.8
CSS0031640 Camellia sinensis var. sinensis HOM05D004322 ORTHO05D005033 8.1e-66 254.2 171 69.6
Sc10g0004980 Simmondsia chinensis HOM05D004322 ORTHO05D005033 8.1e-66 254.2 173 69.4
BcaC01g05770 Brassica carinata HOM05D004322 ORTHO05D005033 1.5e-64 250.0 180 65.0
Nitab4.5_0000249g0270 Nicotiana tabacum HOM05D004322 ORTHO05D005033 8.4e-63 244.2 188 64.4
Medtr0153s0030 Medicago truncatula HOM05D004322 ORTHO05D005033 5.5e-62 241.5 170 65.9
Lsat_1_v5_gn_9_116181 Lactuca sativa HOM05D004322 ORTHO05D005033 2.7e-61 239.2 191 60.7
Actinidia00226 Actinidia chinensis HOM05D004322 ORTHO05D005033 3.5e-61 238.8 198 62.6
Dinv19343 Davidia involucrata HOM05D004322 ORTHO05D005033 1.0e-60 237.3 155 72.3
Prupe.1G186200 Prunus persica HOM05D004322 ORTHO05D005033 6.7e-60 234.6 159 69.2
Os04g0428900 Oryza sativa ssp. japonica HOM05D004322 ORTHO05D005033 2.1e-58 229.6 198 56.6
Zm00001eb082980 Zea mays HOM05D004322 ORTHO05D005033 8.2e-58 227.6 198 54.5
Sabra01G0160700 Salix brachista HOM05D004322 ORTHO05D005033 1.3e-55 220.3 167 65.3
AagrBONN_evm.TU.Sc2ySwM_228.2369 Anthoceros agrestis HOM05D004322 ORTHO05D005033 5.0e-55 218.4 198 51.0
Nitab4.5_0003071g0090 Nicotiana tabacum HOM05D004322 ORTHO05D005033 1.6e-53 213.4 198 55.1
BolC9t60208H Brassica oleracea HOM05D004322 ORTHO05D005033 5.1e-52 208.4 145 66.2
SMO353G0429 Selaginella moellendorffii HOM05D004322 ORTHO05D005033 1.9e-51 206.5 198 47.0
Mapoly0036s0096 Marchantia polymorpha HOM05D004322 ORTHO05D005033 1.8e-49 199.9 195 47.7
Rhsim11G0132600 Rhododendron simsii HOM05D004322 ORTHO05D005033 3.4e-48 195.7 134 70.9
THA.LOC104809099 Tarenaya hassleriana HOM05D004322 ORTHO05D005033 7.7e-48 194.5 140 62.1
Pp3c14_8990 Physcomitrium patens HOM05D004322 ORTHO05D005033 9.4e-46 187.6 194 44.3
Cc02_g22150 Coffea canephora HOM05D004322 ORTHO05D005033 1.1e-41 174.1 115 67.8
Thecc.07G026500 Theobroma cacao HOM05D004322 ORTHO05D005033 6.9e-41 171.4 185 50.8
Psat1g219720 Pisum sativum HOM05D004322 ORTHO05D005033 9.1e-41 171.0 115 65.2
Lalb_Chr15g0090601 Lupinus albus HOM05D004322 ORTHO05D005033 4.5e-40 168.7 115 64.3
Haze_01278 Corylus avellana HOM05D004322 ORTHO05D005033 7.7e-40 167.9 143 58.0
CBR_g26281 Chara braunii HOM05D004322 ORTHO05D005033 1.3e-39 167.2 160 49.4
QL04p052291 Quercus lobata HOM05D004322 ORTHO05D005033 5.0e-39 165.2 115 66.1
CDE05G2724 Ceratophyllum demersum HOM05D004322 ORTHO05D005033 3.2e-38 162.5 130 61.5
Cpa.g.sc157.24 Carica papaya HOM05D004322 ORTHO05D005033 1.8e-36 156.8 111 72.1
SHI16603 Sapria himalayana HOM05D004322 ORTHO05D005033 1.7e-34 150.2 142 50.7
SEGI_09552 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 4.8e-34 148.7 115 56.5
SEGI_31940 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 6.3e-34 148.3 115 56.5
CBR_g4180 Chara braunii HOM05D004322 ORTHO05D005033 3.5e-32 142.5 143 49.7
Medtr0153s0020 Medicago truncatula HOM05D004322 ORTHO05D005033 2.1e-29 133.3 87 63.2
CAN.G1352.11 Capsicum annuum HOM05D004322 ORTHO05D005033 6.3e-26 121.7 115 53.9
Cc02_g22140 Coffea canephora HOM05D004322 ORTHO05D005033 3.1e-25 119.4 83 71.1
Lalb_Chr15g0090591 Lupinus albus HOM05D004322 ORTHO05D005033 3.1e-25 119.4 77 79.2
Zm00001eb422450 Zea mays HOM05D004322 ORTHO05D005033 3.1e-25 119.4 145 39.3
Manes.10G133677 Manihot esculenta HOM05D004322 ORTHO05D005033 1.6e-24 117.1 77 77.9
CAN.G1352.10 Capsicum annuum HOM05D004322 ORTHO05D005033 1.7e-23 113.6 77 75.3
Potri.003G022001 Populus trichocarpa HOM05D004322 ORTHO05D005033 1.7e-23 113.6 77 74.0
Gohir.D08G183600 Gossypium hirsutum HOM05D004322 ORTHO05D005033 3.8e-23 112.5 77 72.7
QL11p019123 Quercus lobata HOM05D004322 ORTHO05D005033 3.8e-23 112.5 97 60.8
Sabra01G0160600 Salix brachista HOM05D004322 ORTHO05D005033 5.0e-23 112.1 77 75.3
Oeu044826.1 Olea europaea HOM05D004322 ORTHO05D005033 1.4e-20 104.0 77 67.5
Oeu044828.1 Olea europaea HOM05D004322 ORTHO05D005033 1.4e-20 104.0 77 67.5
Glyma.10G118567 Glycine max HOM05D004322 ORTHO05D005033 4.0e-20 102.4 69 76.8
MBI18_g28448_MAGBIO Magnolia biondii HOM05D004322 ORTHO05D005033 1.2e-19 100.9 65 70.8
Glyma.10G118633 Glycine max HOM05D004322 ORTHO05D005033 1.4e-17 94.0 99 43.4
Gohir.D12G215800 Gossypium hirsutum HOM05D004322 ORTHO05D005033 1.8e-17 93.6 75 66.7
Oeu012736.1 Olea europaea HOM05D004322 ORTHO05D005033 1.8e-17 93.6 72 66.7
SEGI_18567 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 4.1e-17 92.4 81 56.8
Thecc.07G026400 Theobroma cacao HOM05D004322 ORTHO05D005033 2.0e-16 90.1 82 51.2
Cpa.g.sc157.23 Carica papaya HOM05D004322 ORTHO05D005033 3.5e-16 89.4 55 67.3
Medtr0153s0060 Medicago truncatula HOM05D004322 ORTHO05D005033 2.9e-15 86.3 145 41.4
Medtr2g007855 Medicago truncatula HOM05D004322 ORTHO05D005033 8.5e-15 84.7 65 63.1
QL11p019127 Quercus lobata HOM05D004322 ORTHO05D005033 1.2e-13 80.9 64 59.4
Lsat_1_v5_gn_9_65501 Lactuca sativa HOM05D001588 ORTHO05D002975 1.6e-13 80.5 55 56.4
Cre14.g608850 Chlamydomonas reinhardtii HOM05D004322 ORTHO05D005033 1.8e-12 77.0 119 37.8
Lsat_1_v5_gn_7_68880 Lactuca sativa HOM05D004322 ORTHO05D005033 3.0e-12 76.3 52 57.7
BcaB07g33266 Brassica carinata HOM05D004322 ORTHO05D005033 2.0e-11 73.6 56 57.1
BcaB04g18035 Brassica carinata HOM05D004322 ORTHO05D005033 1.3e-10 70.9 56 57.1
HPP92_016147 Vanilla planifolia HOM05D004322 ORTHO05D005033 4.1e-09 65.9 55 60.0
TPR.G19730 Trifolium pratense HOM05D004322 ORTHO05D005033 3.5e-08 62.8 48 58.3
TPR.G19742 Trifolium pratense HOM05D004322 ORTHO05D005033 5.9e-08 62.0 44 72.7
SEGI_23686 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 8.6e-07 58.2 66 42.4
TAR381G0540 Trochodendron aralioides HOM05D004322 ORTHO05D005033 1.5e-06 57.4 43 69.8
Lsat_1_v5_gn_4_104380 Lactuca sativa HOM05D001722 ORTHO05D048310 2.5e-06 56.6 34 55.9


User provided reference genes

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