Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2416 Papaver somniferum HOM05D005458 ORTHO05D005672 5.9e-27 123.6 70 100.0
PSO063G0044 Papaver somniferum HOM05D005458 ORTHO05D005672 5.9e-27 123.6 70 100.0
TWI75G0430 Tripterygium wilfordii HOM05D005458 ORTHO05D005672 1.9e-17 92.0 68 79.4
CiPaw.01G120800 Carya illinoinensis HOM05D005458 ORTHO05D005672 3.9e-15 84.3 70 74.3
Lsat_1_v5_gn_6_60280 Lactuca sativa HOM05D005458 ORTHO05D005672 6.7e-15 83.6 69 75.4
CsaV3_2G011550 Cucumis sativus L. HOM05D005458 ORTHO05D005672 8.8e-15 83.2 70 75.7
Potri.017G055501 Populus trichocarpa HOM05D005458 ORTHO05D005672 2.0e-14 82.0 70 74.3
Prupe.1G008500 Prunus persica HOM05D005458 ORTHO05D005672 2.6e-14 81.6 62 82.3
Peaxi162Scf00047g00517 Petunia axillaris HOM05D005458 ORTHO05D005672 4.4e-14 80.9 61 82.0
Rhsim02G0057300 Rhododendron simsii HOM05D005458 ORTHO05D005672 7.4e-14 80.1 54 87.0
Glyma.08G351700 Glycine max HOM05D005458 ORTHO05D005672 9.7e-14 79.7 62 77.4
Nn1g07886 Nelumbo nucifera HOM05D005458 ORTHO05D005672 1.7e-13 79.0 68 69.1
Thecc.01G224300 Theobroma cacao HOM05D005458 ORTHO05D005672 1.7e-13 79.0 70 72.9
Aqoxy2G03857 Aquilegia oxysepala HOM05D005458 ORTHO05D005672 2.8e-13 78.2 70 74.3
Pp3c4_17970 Physcomitrium patens HOM05D005458 ORTHO05D005672 2.8e-13 78.2 61 80.3
AT3G24100 Arabidopsis thaliana HOM05D005458 ORTHO05D005672 4.8e-13 77.4 49 85.7
Ciclev10006390m.g Citrus clementina HOM05D005458 ORTHO05D005672 6.3e-13 77.0 66 75.8
CARHR219300 Cardamine hirsuta HOM05D005458 ORTHO05D005672 8.2e-13 76.6 48 85.4
ClCG06G007830 Citrullus lanatus HOM05D005458 ORTHO05D005672 8.2e-13 76.6 55 81.8
PGSC0003DMG400031295 Solanum tuberosum HOM05D005458 ORTHO05D005672 8.2e-13 76.6 67 74.6
ECA248G3568 Erigeron canadensis HOM05D000609 ORTHO05D000462 1.1e-12 76.3 60 76.7
FvH4_4g16450 Fragaria vesca HOM05D005458 ORTHO05D005672 1.1e-12 76.3 68 70.6
Ah.13g078150 Amaranthus hybridus HOM05D002428 ORTHO05D000462 1.4e-12 75.9 58 77.6
Lalb_Chr01g0022281 Lupinus albus HOM05D005458 ORTHO05D005672 1.4e-12 75.9 64 75.0
Manes.15G054000 Manihot esculenta HOM05D005458 ORTHO05D005672 1.4e-12 75.9 64 73.4
AT4G13615 Arabidopsis thaliana HOM05D005458 ORTHO05D005672 1.8e-12 75.5 48 85.4
CAN.G1635.9 Capsicum annuum HOM05D005458 ORTHO05D005672 1.8e-12 75.5 65 73.8
Carub.0003s2440 Capsella rubella HOM05D005458 ORTHO05D005672 2.4e-12 75.1 48 85.4
Mapoly0075s0018 Marchantia polymorpha HOM05D005458 ORTHO05D005672 2.4e-12 75.1 60 75.0
Thhalv10026730m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 4.1e-12 74.3 47 85.1
Pp3c12_4180 Physcomitrium patens HOM05D005458 ORTHO05D005672 4.1e-12 74.3 59 79.7
CANSAT11G1273 Cannabis sativa HOM05D005458 ORTHO05D005672 5.3e-12 73.9 70 70.0
AL3G39170 Arabidopsis lyrata HOM05D005458 ORTHO05D005672 7.0e-12 73.6 47 85.1
A04p08570 Brassica napus HOM05D005458 ORTHO05D005672 9.1e-12 73.2 47 85.1
BolC4t25811H Brassica oleracea HOM05D005458 ORTHO05D005672 9.1e-12 73.2 47 85.1
BraA04t16551Z Brassica rapa HOM05D005458 ORTHO05D005672 9.1e-12 73.2 47 85.1
Prupe.8G201600 Prunus persica HOM05D005458 ORTHO05D005672 9.1e-12 73.2 59 74.6
Atru.chr4.1700 Acer truncatum HOM05D005458 ORTHO05D005672 1.2e-11 72.8 60 75.0
AL7G42970 Arabidopsis lyrata HOM05D005458 ORTHO05D005672 1.2e-11 72.8 47 83.0
Hma1.2p1_1407F.1_g281420 Hydrangea macrophylla HOM05D000434 ORTHO05D005672 1.6e-11 72.4 63 74.6
Lj1g0002931 Lotus japonicus HOM05D005458 ORTHO05D005672 1.6e-11 72.4 62 74.2
Phvul.008G127837 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 1.6e-11 72.4 60 71.7
MELO3C020447.2 Cucumis melo HOM05D005458 ORTHO05D005672 2.0e-11 72.0 46 87.0
CARHR100100 Cardamine hirsuta HOM05D005458 ORTHO05D005672 2.6e-11 71.6 47 83.0
unitig_736.g22466 Utricularia gibba HOM05D005458 ORTHO05D005672 2.6e-11 71.6 49 81.6
Sc05g0002070 Simmondsia chinensis HOM05D005458 ORTHO05D005672 3.5e-11 71.2 67 70.1
Potri.014G056600 Populus trichocarpa HOM05D005458 ORTHO05D005672 4.5e-11 70.9 70 68.6
Ca_17417_v3 Cicer arietinum L. HOM05D005458 ORTHO05D005672 5.9e-11 70.5 63 74.6
Psat3g147360 Pisum sativum HOM05D005458 ORTHO05D005672 5.9e-11 70.5 62 75.8
ATR1145G024 Amborella trichopoda HOM05D005458 ORTHO05D005672 7.7e-11 70.1 58 75.9
Gohir.A07G157232 Gossypium hirsutum HOM05D005458 ORTHO05D005672 7.7e-11 70.1 50 82.0
BcaC02g09406 Brassica carinata HOM05D016886 ORTHO05D005672 1.0e-10 69.7 44 86.4
Gorai.004G226200 Gossypium raimondii HOM05D005458 ORTHO05D005672 1.0e-10 69.7 67 70.1
Pp3c13_10560 Physcomitrium patens HOM05D005458 ORTHO05D005672 1.0e-10 69.7 55 78.2
GSVIVG01021052001 Vitis vinifera HOM05D005458 ORTHO05D005672 1.0e-10 69.7 71 64.8
arahy.Tifrunner.gnm1.ann1.XWTR79 Arachis hypogaea HOM05D005458 ORTHO05D005672 1.3e-10 69.3 46 87.0
Zm00001eb287790 Zea mays HOM05D005458 ORTHO05D005672 1.3e-10 69.3 70 68.6
Gohir.D07G163401 Gossypium hirsutum HOM05D005458 ORTHO05D005672 2.2e-10 68.6 49 81.6
Gorai.001G187200 Gossypium raimondii HOM05D005458 ORTHO05D005672 2.2e-10 68.6 49 81.6
BcaB04g17662 Brassica carinata HOM05D005458 ORTHO05D005672 2.9e-10 68.2 44 84.1
Cc03_g07880 Coffea canephora HOM05D005458 ORTHO05D005672 3.8e-10 67.8 56 76.8
Thhalv10002785m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 3.8e-10 67.8 44 84.1
Migut.D02491 Erythranthe guttata HOM05D005458 ORTHO05D005672 5.0e-10 67.4 71 64.8
Eucgr.H00051 Eucalyptus grandis HOM05D005458 ORTHO05D005672 6.5e-10 67.0 66 65.2
Gohir.D07G207100 Gossypium hirsutum HOM05D005458 ORTHO05D005672 6.5e-10 67.0 48 79.2
Gorai.001G233500 Gossypium raimondii HOM05D005458 ORTHO05D005672 6.5e-10 67.0 48 79.2
Aa31LG9G4030 Aethionema arabicum HOM05D005458 ORTHO05D005672 8.5e-10 66.6 43 83.7
Duzib211G0320 Durio zibethinus HOM05D005458 ORTHO05D005672 8.5e-10 66.6 48 79.2
FAN07G0843 Fragaria x ananassa HOM05D005458 ORTHO05D005672 8.5e-10 66.6 63 68.3
Phvul.010G019701 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 8.5e-10 66.6 61 68.9
Potri.001G315400 Populus trichocarpa HOM05D005458 ORTHO05D005672 8.5e-10 66.6 48 83.3
Lalb_Chr19g0125681 Lupinus albus HOM05D005458 ORTHO05D005672 1.1e-09 66.2 64 70.3
Sp7g11280 Schrenkiella parvula HOM05D017066 ORTHO05D005672 1.1e-09 66.2 42 85.7
Hund27148 Selenicereus undatus HOM05D005458 ORTHO05D005672 1.1e-09 66.2 57 71.9
Os05g0407100 Oryza sativa ssp. japonica HOM05D005458 ORTHO05D005672 1.5e-09 65.9 58 70.7
PGR142G1434 Punica granatum HOM05D005458 ORTHO05D005672 1.5e-09 65.9 47 78.7
Dinv27235 Davidia involucrata HOM05D005458 ORTHO05D005672 1.9e-09 65.5 52 76.9
GSVIVG01003386001 Vitis vinifera HOM05D005458 ORTHO05D005672 2.5e-09 65.1 73 63.0
Pp3c12_4160 Physcomitrium patens HOM05D005458 ORTHO05D005672 3.2e-09 64.7 57 68.4
Haze_24813 Corylus avellana HOM05D005458 ORTHO05D005672 4.2e-09 64.3 59 69.5
Sc19g0007160 Simmondsia chinensis HOM05D005458 ORTHO05D005672 4.2e-09 64.3 64 70.3
TPR.G14533 Trifolium pratense HOM05D005458 ORTHO05D005672 4.2e-09 64.3 52 78.8
Duzib133G0368 Durio zibethinus HOM05D005458 ORTHO05D005672 5.5e-09 63.9 48 77.1
EL10Ac3g07484 Beta vulgaris HOM05D005458 ORTHO05D005672 1.2e-08 62.8 70 65.7
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 1.6e-08 62.4 48 79.2
Manes.12G045600 Manihot esculenta HOM05D005458 ORTHO05D005672 1.6e-08 62.4 71 62.0
Glyma.18G164200 Glycine max HOM05D005458 ORTHO05D005672 2.1e-08 62.0 62 66.1
MD04G1009100 Malus domestica HOM05D005458 ORTHO05D005672 2.1e-08 62.0 60 70.0
C08p07830 Brassica napus HOM05D005458 ORTHO05D005672 2.7e-08 61.6 40 82.5
BolC8t47637H Brassica oleracea HOM05D005458 ORTHO05D005672 2.7e-08 61.6 40 82.5
Duzib138G0965 Durio zibethinus HOM05D005458 ORTHO05D005672 2.7e-08 61.6 48 75.0
Medtr7g056410 Medicago truncatula HOM05D005458 ORTHO05D005672 3.6e-08 61.2 56 75.0
Hund16751 Selenicereus undatus HOM05D005458 ORTHO05D005672 3.6e-08 61.2 67 64.2
VMungo0331G1336 Vigna mungo HOM05D005458 ORTHO05D005672 4.7e-08 60.8 65 63.1
Carub.0007s2961 Capsella rubella HOM05D005458 ORTHO05D005672 6.1e-08 60.5 64 65.6
Thhalv10026728m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 6.1e-08 60.5 64 65.6
EL10Ac1g00186 Beta vulgaris HOM05D005458 ORTHO05D005672 8.0e-08 60.1 45 80.0
Cpa.g.sc8.142 Carica papaya HOM05D005458 ORTHO05D005672 8.0e-08 60.1 48 72.9
BcaC07g37341 Brassica carinata HOM05D005458 ORTHO05D005672 1.0e-07 59.7 39 82.1
Cpa.g.sc2154.1 Carica papaya HOM05D005458 ORTHO05D005672 1.0e-07 59.7 57 70.2
Gohir.A08G195125 Gossypium hirsutum HOM05D005458 ORTHO05D005672 1.8e-07 58.9 61 67.2
arahy.Tifrunner.gnm1.ann1.AN5TC9 Arachis hypogaea HOM05D005458 ORTHO05D005672 2.3e-07 58.5 45 77.8
DCAR_018640 Daucus carota HOM05D001184 ORTHO05D003397 3.0e-07 58.2 45 77.8
THA.LOC104804811 Tarenaya hassleriana HOM05D005458 ORTHO05D005672 3.0e-07 58.2 68 58.8
VMungo1383G3675 Vigna mungo HOM05D005458 ORTHO05D000001 3.0e-07 58.2 60 61.7
arahy.Tifrunner.gnm1.ann1.U1G5UA Arachis hypogaea HOM05D005458 ORTHO05D005672 4.0e-07 57.8 40 85.0
Lalb_Chr07g0194291 Lupinus albus HOM05D005458 ORTHO05D005672 4.0e-07 57.8 59 62.7
COL.COLO4_12105 Corchorus olitorius HOM05D001094 ORTHO05D001050 5.2e-07 57.4 42 81.0
arahy.Tifrunner.gnm1.ann1.58ZGJB Arachis hypogaea HOM05D005458 ORTHO05D005672 6.7e-07 57.0 44 77.3
Peaxi162Scf00594g00523 Petunia axillaris HOM05D005458 ORTHO05D005672 6.7e-07 57.0 66 63.6
Aa31LG9G4840 Aethionema arabicum HOM05D002547 ORTHO05D002649 8.8e-07 56.6 62 64.5
CSS0011220 Camellia sinensis var. sinensis HOM05D005458 ORTHO05D005672 1.2e-06 56.2 68 58.8
Hma1.2p1_0187F.1_g082170 Hydrangea macrophylla HOM05D005458 ORTHO05D005672 1.2e-06 56.2 46 73.9
Manes.03G147401 Manihot esculenta HOM05D005458 ORTHO05D005672 2.0e-06 55.5 69 59.4
FAN15G3619 Fragaria x ananassa HOM05D005458 ORTHO05D005672 2.6e-06 55.1 61 60.7
Lsat_1_v5_gn_8_89780 Lactuca sativa HOM05D005458 ORTHO05D005672 3.3e-06 54.7 71 59.2
Os11g0425600 Oryza sativa ssp. japonica HOM05D005458 ORTHO05D005672 4.4e-06 54.3 43 74.4
Zm00001eb356280 Zea mays HOM05D005458 ORTHO05D005672 4.4e-06 54.3 43 74.4
AL8G12500 Arabidopsis lyrata HOM05D005458 ORTHO05D005672 5.7e-06 53.9 52 65.4
Carub.0007s2892 Capsella rubella HOM05D005458 ORTHO05D005672 5.7e-06 53.9 35 85.7
CiPaw.03G148500 Carya illinoinensis HOM05D005458 ORTHO05D005672 5.7e-06 53.9 63 58.7
Lj3g0027829 Lotus japonicus HOM05D005458 ORTHO05D005672 5.7e-06 53.9 68 54.4
Ah.05g178960 Amaranthus hybridus HOM05D005458 ORTHO05D005672 7.5e-06 53.5 43 76.7
MD05G1174200 Malus domestica HOM05D005458 ORTHO05D005672 7.5e-06 53.5 63 60.3
FAN12G0355 Fragaria x ananassa HOM05D005458 ORTHO05D005672 9.7e-06 53.1 47 66.0


User provided reference genes

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