Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 8.3e-174 613.6 312 100.0
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 7.6e-127 457.6 304 80.6
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 1.7e-113 413.3 209 100.0
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 2.4e-104 382.9 354 62.7
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 2.1e-92 343.2 369 58.5
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 3.5e-79 299.3 311 60.8
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 2.9e-73 279.6 208 75.5
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 7.8e-71 271.6 274 56.9
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 8.6e-70 268.1 274 56.6
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 1.2e-58 231.1 370 46.2
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-56 224.6 160 77.5
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-56 224.6 263 55.5
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 7.8e-55 218.4 160 75.6
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 1.7e-54 217.2 355 45.9
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 1.8e-51 207.2 259 52.1
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 9.9e-50 201.4 236 53.8
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-48 198.0 385 41.8
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 4.4e-42 176.0 295 45.1
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 2.2e-41 173.7 286 45.5
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 9.3e-40 168.3 228 50.4
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 1.6e-39 167.5 228 50.4
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 3.9e-38 162.9 295 42.4
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 1.3e-28 131.3 365 34.2
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 2.4e-27 127.1 367 33.2
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 3.1e-27 126.7 366 33.6
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-26 124.4 366 33.3
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 3.4e-26 123.2 363 31.4
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 3.4e-26 123.2 174 49.4
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 4.5e-26 122.9 366 32.8
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 7.6e-26 122.1 367 32.4
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 9.9e-26 121.7 371 32.3
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 1.7e-25 120.9 364 31.0
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.2e-25 120.6 355 33.0
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 2.2e-25 120.6 362 31.5
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 2.2e-25 120.6 364 31.0
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 2.9e-25 120.2 364 31.0
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 3.8e-25 119.8 355 31.8
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 4.9e-25 119.4 370 31.4
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 6.4e-25 119.0 336 31.8
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 6.4e-25 119.0 352 33.2
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 6.4e-25 119.0 367 31.6
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 6.4e-25 119.0 365 31.8
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 6.4e-25 119.0 363 30.9
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 8.4e-25 118.6 231 38.5
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 1.4e-24 117.9 365 31.8
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 1.4e-24 117.9 367 32.4
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 1.4e-24 117.9 353 32.9
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 1.4e-24 117.9 353 30.9
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 1.9e-24 117.5 352 31.5
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.9e-24 117.5 363 30.3
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.9e-24 117.5 363 30.3
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 1.9e-24 117.5 363 30.3
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 3.2e-24 116.7 353 32.0
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 4.2e-24 116.3 340 31.8
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 4.2e-24 116.3 369 31.2
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 5.5e-24 115.9 352 31.8
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 5.5e-24 115.9 354 31.4
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 7.1e-24 115.5 377 30.2
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 7.1e-24 115.5 348 29.9
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 7.1e-24 115.5 339 33.3
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 7.1e-24 115.5 367 31.6
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 9.3e-24 115.2 361 31.6
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 1.2e-23 114.8 364 30.2
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 1.2e-23 114.8 352 32.1
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 1.2e-23 114.8 353 31.4
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 1.6e-23 114.4 353 32.0
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.6e-23 114.4 344 30.2
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 2.1e-23 114.0 354 31.6
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 2.7e-23 113.6 353 32.0
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 4.6e-23 112.8 342 32.5
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 4.6e-23 112.8 367 30.8
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 6.0e-23 112.5 352 31.0
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 6.0e-23 112.5 365 31.0
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 1.3e-22 111.3 347 31.7
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 1.3e-22 111.3 353 31.4
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.3e-22 111.3 348 29.3
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.8e-22 110.9 367 30.0
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 3.0e-22 110.2 381 29.7
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 3.0e-22 110.2 355 27.6
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 3.9e-22 109.8 372 29.6
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 5.1e-22 109.4 352 31.2
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 5.1e-22 109.4 352 31.5
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 1.1e-21 108.2 366 30.1
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 1.5e-21 107.8 340 30.6
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 1.9e-21 107.5 208 39.4
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 2.5e-21 107.1 367 29.2
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 4.3e-21 106.3 207 40.6
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 5.6e-21 105.9 195 42.6
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 7.4e-21 105.5 352 29.3
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 7.4e-21 105.5 352 29.3
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 7.4e-21 105.5 197 40.6
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 1.3e-20 104.8 354 29.7
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 1.6e-20 104.4 354 30.2
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 2.1e-20 104.0 157 42.7
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 2.1e-20 104.0 321 30.8
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 2.1e-20 104.0 356 27.8
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 2.8e-20 103.6 354 29.9
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 3.7e-20 103.2 354 29.4
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 4.8e-20 102.8 334 29.9
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 6.2e-20 102.4 354 29.7
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 1.1e-19 101.7 354 31.4
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 1.8e-19 100.9 322 29.8
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 3.1e-19 100.1 158 41.1
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 5.3e-19 99.4 331 29.6
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 5.3e-19 99.4 321 29.9
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 6.9e-19 99.0 333 28.5
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 9.0e-19 98.6 353 28.9
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 9.0e-19 98.6 196 39.8
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 1.2e-18 98.2 159 40.9
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.2e-18 98.2 156 40.4
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 1.5e-18 97.8 321 29.6
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.5e-18 97.8 349 28.9
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 2.6e-18 97.1 210 36.2
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 4.5e-18 96.3 147 40.8
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 4.5e-18 96.3 320 29.1
PSO170G1852 Papaver somniferum HOM05D004787 ORTHO05D302361 1.0e-17 95.1 76 71.1
PSO210G5779 Papaver somniferum HOM05D004787 ORTHO05D303704 1.0e-17 95.1 76 71.1
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 1.0e-17 95.1 355 28.5
PSO447G0093 Papaver somniferum HOM05D004787 ORTHO05D304571 6.5e-17 92.4 120 50.0
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 9.3e-16 88.6 297 31.6
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.6e-15 87.8 357 28.0
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.6e-15 87.8 357 28.0
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.3e-14 84.7 384 27.9
PSO081G0156 Papaver somniferum HOM05D004787 ORTHO05D304832 1.8e-14 84.3 65 64.6
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 6.7e-14 82.4 146 37.0
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 1.1e-13 81.6 308 28.6
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 1.6e-12 77.8 331 26.9
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 2.4e-11 73.9 283 28.6
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 5.3e-11 72.8 354 26.6
PSO759G0004 Papaver somniferum HOM05D004787 ORTHO05D302987 5.3e-11 72.8 136 41.9
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 1.5e-10 71.2 114 41.2
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 1.5e-10 71.2 166 34.3
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 8.5e-09 65.5 259 27.4
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 3.2e-08 63.5 156 30.8
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 4.2e-08 63.2 277 29.2
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 1.6e-07 61.2 119 36.1
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 7.9e-07 58.9 274 26.6
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 3.9e-06 56.6 89 39.3


User provided reference genes

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