Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 2.5e-142 508.8 273 100.0
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 1.3e-135 486.5 273 96.7
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 9.7e-94 347.4 290 69.7
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.6e-91 340.1 291 70.1
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.3e-90 337.0 290 64.5
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 3.2e-89 332.4 283 68.6
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 5.5e-89 331.6 277 63.5
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.2e-88 330.5 289 63.7
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.6e-88 330.1 297 64.0
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 2.7e-88 329.3 299 60.5
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 4.7e-88 328.6 292 61.6
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 4.7e-88 328.6 278 62.6
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 4.7e-88 328.6 289 61.9
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 6.1e-88 328.2 292 61.6
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 8.0e-88 327.8 291 62.2
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.3e-87 326.2 201 80.6
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 3.0e-87 325.9 276 63.8
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 8.8e-87 324.3 286 65.7
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 2.0e-86 323.2 302 64.6
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 5.7e-86 321.6 277 62.8
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 9.8e-86 320.9 276 65.9
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 9.8e-86 320.9 276 63.0
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 1.3e-85 320.5 201 79.1
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.7e-85 320.1 282 61.3
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 3.7e-85 318.9 284 61.6
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 6.3e-85 318.2 275 64.4
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 8.3e-85 317.8 291 61.5
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.1e-84 317.4 291 63.2
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.4e-84 317.0 283 61.8
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.4e-84 317.0 277 63.5
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 1.8e-84 316.6 277 63.2
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.8e-84 316.6 291 62.5
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 3.1e-84 315.8 309 61.2
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 3.1e-84 315.8 276 62.3
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 4.1e-84 315.5 286 63.3
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 7.0e-84 314.7 275 63.6
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 9.1e-84 314.3 285 66.3
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.1e-84 314.3 285 66.3
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.1e-84 314.3 285 66.0
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 9.1e-84 314.3 202 77.7
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.6e-83 313.5 287 64.1
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 2.0e-83 313.2 282 61.0
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.7e-83 312.8 281 61.9
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 2.7e-83 312.8 195 79.5
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 4.5e-83 312.0 282 60.6
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 4.5e-83 312.0 315 55.6
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 7.7e-83 311.2 278 63.3
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 1.0e-82 310.8 201 77.1
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.3e-82 310.5 272 63.6
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.9e-82 309.3 277 61.4
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 3.8e-82 308.9 288 65.6
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 8.6e-82 307.8 284 63.0
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 2.5e-81 306.2 195 77.4
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 9.5e-81 304.3 279 59.9
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.6e-80 303.5 202 76.2
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 2.1e-80 303.1 284 59.5
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 2.8e-80 302.8 201 79.1
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.8e-80 302.8 284 59.9
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 4.7e-80 302.0 286 61.2
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 6.1e-80 301.6 195 75.9
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 1.4e-79 300.4 197 76.6
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 1.8e-79 300.1 274 60.2
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 2.3e-79 299.7 286 58.7
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.2e-78 297.4 199 75.9
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 2.6e-78 296.2 295 58.6
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 5.7e-78 295.0 281 60.5
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 7.5e-78 294.7 281 56.6
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 9.8e-78 294.3 196 73.5
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.3e-77 293.9 198 73.2
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.3e-77 293.9 278 58.6
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 2.2e-77 293.1 273 58.2
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 3.7e-77 292.4 199 73.9
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.1e-76 290.8 206 74.3
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.8e-76 290.0 195 73.3
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.2e-75 287.3 196 71.4
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 1.6e-75 287.0 270 56.7
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 2.0e-75 286.6 277 55.2
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 2.7e-75 286.2 342 50.9
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 2.7e-75 286.2 277 56.7
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 1.3e-74 283.9 273 57.1
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.7e-74 283.5 408 44.6
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 4.3e-73 278.9 299 56.5
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 2.1e-72 276.6 279 56.3
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 2.8e-72 276.2 225 64.0
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 6.8e-71 271.6 321 49.8
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 1.7e-69 266.9 276 56.2
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 7.0e-68 261.5 180 72.8
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 7.0e-68 261.5 305 51.1
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.0e-67 260.0 275 55.6
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 3.0e-66 256.1 197 63.5
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 1.9e-65 253.4 193 65.3
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 9.5e-65 251.1 193 64.2
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 1.4e-63 247.3 156 76.9
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 2.0e-62 243.4 205 61.5
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 6.4e-61 238.4 152 77.0
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 5.4e-60 235.3 232 55.6
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 4.7e-56 222.2 247 53.8
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 1.7e-50 203.8 161 68.3
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.5e-49 200.7 190 60.0
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.6e-49 198.7 131 78.6
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.4e-47 194.1 198 61.1
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 8.9e-47 191.4 133 74.4
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 8.9e-47 191.4 225 48.4
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 2.4e-44 183.3 209 49.8
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.8e-37 159.5 96 81.2
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 3.2e-36 156.4 176 56.8
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 4.3e-33 146.0 403 33.7
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 6.2e-32 142.1 132 58.3
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.6e-27 127.5 80 73.8
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 1.4e-23 114.4 75 73.3
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.0e-22 110.5 96 63.5
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.1e-17 94.7 221 35.3
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 4.1e-15 86.3 290 29.7
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 7.9e-11 72.0 214 28.0
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 8.2e-08 62.0 44 65.9
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.8e-07 60.8 43 62.8
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 9.0e-07 58.5 38 68.4
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.2e-06 58.2 61 57.4
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 2.0e-06 57.4 116 36.2
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.6e-06 57.0 37 64.9
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.0e-05 55.1 37 64.9


User provided reference genes

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