Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 2.3e-97 359.0 193 100.0
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 3.1e-94 348.6 173 98.8
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 7.9e-66 254.2 171 70.8
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 8.8e-65 250.8 172 69.2
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 4.4e-64 248.4 172 67.4
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 9.7e-64 247.3 171 67.8
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 1.3e-63 246.9 172 66.9
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 2.2e-63 246.1 170 70.0
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 9.1e-62 240.7 176 66.5
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 2.6e-61 239.2 172 68.0
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 4.5e-61 238.4 170 66.5
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 5.9e-61 238.0 162 71.6
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 5.9e-61 238.0 163 70.6
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 5.9e-61 238.0 172 68.6
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 7.7e-61 237.7 172 65.7
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 7.7e-61 237.7 172 68.6
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 1.0e-60 237.3 167 68.3
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 1.0e-60 237.3 166 71.1
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 1.3e-60 236.9 166 69.3
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 1.7e-60 236.5 169 68.0
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.7e-60 236.5 166 66.9
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 1.7e-60 236.5 163 66.3
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.9e-60 235.7 172 65.1
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 3.8e-60 235.3 173 67.1
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 3.8e-60 235.3 172 65.7
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 5.0e-60 235.0 172 65.7
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 5.0e-60 235.0 166 66.3
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 1.1e-59 233.8 163 65.6
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 1.5e-59 233.4 147 75.5
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 1.9e-59 233.0 166 66.3
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 2.5e-59 232.6 166 66.3
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 3.2e-59 232.3 166 66.3
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 4.2e-59 231.9 173 65.9
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 1.2e-58 230.3 172 65.7
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 1.6e-58 229.9 191 59.2
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 2.7e-58 229.2 173 65.3
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 2.7e-58 229.2 165 69.1
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 3.6e-58 228.8 166 66.9
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 4.7e-58 228.4 166 65.1
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 6.1e-58 228.0 191 58.6
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 1.4e-57 226.9 175 65.1
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 1.8e-57 226.5 163 66.3
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 1.8e-57 226.5 166 66.3
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 2.3e-57 226.1 170 65.9
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 2.3e-57 226.1 172 64.5
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 5.2e-57 224.9 169 63.3
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 3.3e-56 222.2 166 65.7
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 1.7e-55 219.9 166 62.0
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 3.7e-55 218.8 158 66.5
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 4.8e-55 218.4 166 63.3
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 6.3e-55 218.0 160 66.9
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 1.4e-54 216.9 166 63.3
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 1.8e-54 216.5 137 73.0
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 2.4e-54 216.1 130 73.8
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 2.4e-54 216.1 192 61.5
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 3.1e-54 215.7 172 62.2
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 4.1e-54 215.3 166 62.7
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 5.3e-54 214.9 148 69.6
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 5.3e-54 214.9 166 63.3
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 7.0e-54 214.5 166 64.5
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 2.6e-53 212.6 175 59.4
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 2.6e-53 212.6 140 68.6
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 3.5e-53 212.2 167 62.3
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 3.5e-53 212.2 174 57.5
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 5.9e-53 211.5 166 63.9
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 5.9e-53 211.5 166 63.9
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 5.9e-53 211.5 166 63.9
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 5.9e-53 211.5 166 63.9
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 5.9e-53 211.5 166 63.9
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 5.9e-53 211.5 161 63.4
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 1.0e-52 210.7 166 62.7
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 1.0e-52 210.7 166 62.7
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 1.7e-52 209.9 166 60.8
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 2.2e-52 209.5 166 61.4
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 3.8e-52 208.8 173 60.7
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 5.0e-52 208.4 166 62.7
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 1.9e-51 206.5 191 58.6
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 3.2e-51 205.7 162 63.0
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.2e-51 205.7 162 63.0
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 4.2e-51 205.3 162 63.0
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 9.4e-51 204.1 129 74.4
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 9.4e-51 204.1 130 72.3
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 8.0e-50 201.1 145 64.1
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 1.0e-49 200.7 173 59.5
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.0e-49 200.7 184 57.6
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 8.8e-49 197.6 166 58.4
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.0e-48 196.4 175 58.3
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.7e-47 193.4 150 61.3
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 9.1e-46 187.6 181 52.5
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 2.0e-45 186.4 127 63.8
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 3.6e-42 175.6 151 61.6
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.8e-41 171.0 140 61.4
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 7.5e-40 167.9 112 65.2
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 1.8e-38 163.3 172 50.6
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 7.7e-37 157.9 179 49.2
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 2.1e-34 149.8 189 47.6
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 1.8e-33 146.7 163 46.0
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 3.0e-33 146.0 147 53.1
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 3.5e-29 132.5 138 45.7
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 3.9e-28 129.0 76 75.0
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.2e-24 117.5 145 42.1
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 4.9e-23 112.1 90 64.4
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 7.8e-21 104.8 123 51.2
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 2.8e-18 96.3 58 67.2
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.4e-17 94.0 75 60.0
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 3.4e-16 89.4 85 56.5
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 2.4e-14 83.2 82 56.1
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.1e-13 80.1 45 73.3
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 2.1e-10 70.1 61 52.5
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.8e-09 67.0 37 70.3
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 4.4e-08 62.4 56 51.8
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 1.9e-06 57.0 59 42.4


User provided reference genes

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