Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 0.0e+00 1566.2 838 100.0
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 0.0e+00 1526.5 839 97.7
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.2e-275 953.4 838 63.6
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 1.0e-271 940.3 824 63.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.1e-264 916.0 825 60.7
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.0e-263 913.7 836 59.8
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 1.4e-260 903.3 834 59.0
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 4.1e-260 901.7 830 60.7
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.8e-259 897.5 831 59.4
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 5.2e-255 884.8 836 58.7
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.0e-254 882.9 833 59.2
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.4e-252 876.7 831 58.4
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 2.4e-252 875.9 833 58.5
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 4.6e-251 871.7 839 58.5
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 1.3e-250 870.2 838 58.6
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.1e-249 867.1 811 59.2
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 3.3e-249 865.5 839 58.8
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 5.6e-249 864.8 829 58.6
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.2e-248 863.6 832 57.9
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 4.7e-248 861.7 829 58.5
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.8e-247 859.8 841 56.8
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.3e-247 859.4 833 58.0
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 2.6e-246 855.9 828 56.3
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 9.8e-246 854.0 838 57.6
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 3.7e-245 852.0 833 57.7
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.4e-244 849.4 837 57.2
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.3e-242 843.6 838 57.0
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.7e-242 843.2 818 57.5
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 2.3e-242 842.8 838 56.8
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 7.3e-241 837.8 833 56.2
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 2.1e-240 836.3 833 56.2
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 4.0e-239 832.0 832 55.8
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 5.2e-239 831.6 964 51.2
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.2e-238 830.5 831 55.6
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 2.0e-238 829.7 869 53.4
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.7e-237 826.6 840 55.4
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 6.4e-237 824.7 834 56.1
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 5.4e-236 821.6 834 56.0
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.7e-235 819.3 828 54.0
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 3.9e-234 815.5 833 55.0
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.2e-232 810.4 832 54.3
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.7e-229 800.0 830 54.3
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 2.2e-229 799.7 832 54.8
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 8.4e-229 797.7 950 50.2
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 2.1e-227 793.1 830 54.2
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 4.6e-227 792.0 830 54.1
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 4.6e-227 792.0 843 53.4
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 7.8e-227 791.2 833 53.4
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.0e-226 790.8 835 52.8
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 3.9e-226 788.9 834 54.0
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 5.1e-226 788.5 824 53.8
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 8.7e-226 787.7 830 54.1
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.5e-225 786.2 843 53.1
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 4.3e-225 785.4 830 52.7
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 2.8e-224 782.7 833 54.7
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 1.8e-223 780.0 826 52.8
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 2.4e-223 779.6 841 53.7
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.6e-222 776.2 830 53.4
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 7.6e-222 774.6 836 52.6
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 1.4e-220 770.4 836 52.3
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 9.3e-220 767.7 833 52.3
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.6e-219 766.9 708 59.6
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 1.6e-219 766.9 829 51.7
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 4.6e-219 765.4 834 52.6
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.0e-218 764.2 831 52.2
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 3.0e-218 762.7 826 52.7
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.1e-217 760.8 832 51.8
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 1.3e-216 757.3 830 52.5
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 1.8e-215 753.4 823 52.1
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 3.1e-215 752.7 795 54.2
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 2.6e-214 749.6 866 50.6
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 4.5e-214 748.8 974 46.2
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 9.9e-214 747.7 833 52.2
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 8.4e-213 744.6 826 51.7
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 8.4e-213 744.6 829 51.1
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.2e-212 742.3 827 51.9
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.2e-211 740.7 827 51.8
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.2e-211 740.7 827 51.6
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 2.1e-211 740.0 836 51.2
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 2.7e-211 739.6 659 64.0
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 1.8e-210 736.9 834 50.8
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 3.0e-210 736.1 787 54.1
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 6.7e-210 734.9 840 51.2
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 3.7e-208 729.2 818 51.8
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 3.7e-208 729.2 827 52.0
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 9.0e-207 724.5 816 52.5
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.6e-206 723.0 644 62.4
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 3.4e-206 722.6 825 51.4
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.3e-205 720.7 597 65.7
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 8.4e-205 718.0 832 51.4
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 1.9e-204 716.8 825 51.0
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 3.2e-204 716.1 828 51.6
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 4.6e-203 712.2 703 56.9
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 2.3e-202 709.9 836 50.6
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 7.4e-201 704.9 842 50.6
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 6.2e-200 701.8 825 51.8
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 7.2e-196 688.3 835 49.9
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 6.1e-195 685.3 859 49.8
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 9.7e-193 677.9 835 47.8
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 6.3e-192 675.2 819 49.2
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 2.4e-191 673.3 925 44.9
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.0e-189 667.9 841 47.4
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 1.2e-187 661.0 824 48.3
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 1.2e-187 661.0 840 48.1
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.1e-187 660.2 707 54.5
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.7e-187 659.8 827 48.9
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 4.3e-185 652.5 817 47.9
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 6.3e-184 648.7 927 44.1
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 1.8e-183 647.1 815 47.6
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 1.2e-182 644.4 818 47.3
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 1.0e-181 641.3 821 47.7
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 2.9e-181 639.8 646 56.0
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 1.9e-180 637.1 814 46.3
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 9.4e-180 634.8 812 47.2
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 9.4e-180 634.8 820 48.0
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.6e-179 634.0 818 45.7
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 3.6e-179 632.9 815 46.9
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 3.6e-179 632.9 814 46.6
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 7.9e-179 631.7 824 47.1
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.3e-178 630.2 868 45.6
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.6e-177 626.7 642 55.6
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 1.7e-176 624.0 837 47.0
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.1e-175 621.3 640 55.3
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 2.0e-174 617.1 812 48.3
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 2.6e-174 616.7 816 45.5
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 4.7e-171 605.9 807 45.7
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 4.7e-171 605.9 836 44.9
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 9.7e-169 598.2 639 54.1
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 4.1e-167 592.8 837 44.2
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 2.2e-165 587.0 815 44.0
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 5.5e-164 582.4 649 52.2
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 6.1e-163 578.9 647 52.7
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 4.1e-159 566.2 820 42.6
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 5.5e-156 555.8 863 42.1
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.8e-154 550.8 862 42.1
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 3.0e-154 550.1 635 52.1
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 7.3e-148 528.9 553 55.0
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 7.0e-143 512.3 820 40.6
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.9e-140 504.2 821 40.6
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 2.1e-131 474.2 814 39.7
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 2.9e-128 463.8 814 40.4
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 1.1e-122 445.3 770 42.2
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 7.1e-119 432.6 540 47.8
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 6.6e-117 426.0 590 45.9
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 1.8e-114 417.9 660 43.5
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 1.6e-107 394.8 771 37.1
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 2.0e-97 361.3 464 46.6
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.1e-95 352.8 440 48.2
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.2e-88 331.3 436 49.5
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 3.2e-79 300.8 795 33.3
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-69 266.5 817 29.1
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 8.5e-56 223.0 194 63.4
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 1.5e-55 222.2 334 44.0
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.8e-53 215.3 324 44.1
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.5e-47 195.7 311 41.5
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 9.8e-44 183.0 132 68.2
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 7.7e-41 173.3 297 35.7
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.3e-40 172.6 234 44.0
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 3.8e-40 171.0 261 42.5
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 4.7e-38 164.1 216 46.3
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 8.0e-38 163.3 189 47.1
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 6.8e-37 160.2 135 63.0
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.0e-36 158.7 158 53.2
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 2.0e-36 158.7 208 42.8
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 4.7e-30 137.5 119 63.0
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 4.4e-28 131.0 115 63.5
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 9.5e-23 113.2 169 48.5
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.0e-21 109.8 117 53.0
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.3e-21 108.6 114 51.8
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 1.4e-18 99.4 74 62.2
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.2e-18 98.2 77 61.0
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 3.2e-18 98.2 67 73.1
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 1.2e-17 96.3 74 60.8
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.5e-17 94.7 88 52.3
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.5e-17 94.7 157 38.9
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 7.8e-17 93.6 114 50.9
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.3e-16 92.0 150 40.7
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.3e-15 88.2 114 47.4
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 7.3e-15 87.0 152 41.4
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 4.4e-12 77.8 53 66.0
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-11 74.7 77 46.8
MBI13_g02371_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D000708 3.9e-08 64.7 50 60.0
Actinidia38716 Actinidia chinensis HOM05D003622 ORTHO05D004453 8.6e-08 63.5 57 52.6
Manes.17G022150 Manihot esculenta HOM05D003622 ORTHO05D000708 4.3e-07 61.2 49 57.1
Oeu055964.1 Olea europaea HOM05D001574 ORTHO05D000708 4.3e-07 61.2 44 59.1
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 9.5e-07 60.1 43 65.1


User provided reference genes

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