Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 2.5e-223 778.5 400 100.0
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 1.0e-216 756.5 401 97.8
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 2.8e-158 562.4 397 75.6
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 6.3e-158 561.2 404 75.5
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 1.9e-154 549.7 407 74.2
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 1.0e-152 543.9 359 80.2
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 1.8e-149 533.1 382 74.3
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 7.0e-149 531.2 383 74.4
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 7.0e-149 531.2 383 75.2
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 1.2e-148 530.4 391 72.6
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 1.7e-147 526.6 401 72.3
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 1.7e-147 526.6 367 76.6
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 5.0e-147 525.0 349 79.1
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 6.5e-147 524.6 344 79.4
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 1.1e-146 523.9 397 72.3
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 1.5e-146 523.5 364 75.3
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 2.5e-146 522.7 348 78.2
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 4.2e-146 521.9 364 75.8
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 5.5e-146 521.5 350 78.6
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 7.2e-146 521.2 402 71.9
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 1.2e-145 520.4 364 75.3
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 1.2e-145 520.4 363 76.0
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 2.1e-145 519.6 339 79.9
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 2.7e-145 519.2 359 76.9
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 3.6e-145 518.8 364 74.5
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 3.6e-145 518.8 383 74.2
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 4.7e-145 518.5 343 79.6
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 6.1e-145 518.1 365 74.5
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 1.4e-144 516.9 364 74.5
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 1.4e-144 516.9 364 74.5
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 2.3e-144 516.2 364 75.5
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 3.0e-144 515.8 386 71.5
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 4.0e-144 515.4 364 74.2
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 5.2e-144 515.0 386 71.5
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 5.2e-144 515.0 394 71.3
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 6.8e-144 514.6 394 71.8
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.2e-143 513.8 355 77.2
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.2e-143 513.8 355 77.2
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 1.5e-143 513.5 398 70.4
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 1.5e-143 513.5 365 74.8
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 2.0e-143 513.1 394 71.6
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 2.6e-143 512.7 363 75.2
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 3.4e-143 512.3 353 76.8
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 4.4e-143 511.9 401 71.1
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 5.7e-143 511.5 356 76.4
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 7.5e-143 511.1 348 78.2
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 1.7e-142 510.0 362 75.7
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 2.2e-142 509.6 403 68.7
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 2.8e-142 509.2 360 74.2
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 6.3e-142 508.1 370 73.0
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 1.4e-141 506.9 347 75.5
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 1.8e-141 506.5 403 68.2
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 1.8e-141 506.5 374 73.8
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 1.8e-141 506.5 332 79.2
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 1.8e-141 506.5 404 69.1
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 3.1e-141 505.8 408 67.9
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 1.6e-140 503.4 318 83.0
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 7.7e-140 501.1 394 70.1
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 7.7e-140 501.1 384 70.8
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 2.2e-139 499.6 363 72.7
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 3.8e-139 498.8 348 76.7
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 1.9e-138 496.5 369 72.4
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 2.5e-138 496.1 391 70.8
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 2.5e-138 496.1 335 77.0
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 6.1e-137 491.5 389 70.2
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 6.1e-137 491.5 339 76.7
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 1.0e-136 490.7 381 70.6
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 1.4e-136 490.3 397 68.0
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 3.0e-136 489.2 361 72.3
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 9.8e-135 484.2 353 73.4
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 3.7e-134 482.3 407 65.6
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 4.9e-134 481.9 321 80.4
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 3.1e-133 479.2 327 76.8
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 7.0e-133 478.0 346 74.9
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.3e-131 473.8 401 67.6
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 2.9e-131 472.6 383 66.6
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 6.6e-131 471.5 342 71.9
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 1.5e-130 470.3 384 68.2
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 5.6e-130 468.4 361 70.6
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 7.3e-130 468.0 350 71.7
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 9.5e-130 467.6 339 73.2
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 8.0e-129 464.5 382 68.3
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 8.0e-129 464.5 346 72.3
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 1.8e-128 463.4 328 76.2
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 5.2e-128 461.8 322 74.5
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 7.5e-127 458.0 379 68.3
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 3.7e-126 455.7 323 72.4
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 1.1e-125 454.1 296 79.7
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 2.3e-123 446.4 285 81.8
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 1.5e-119 433.7 454 59.3
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 1.3e-118 430.6 318 70.8
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 6.0e-116 421.8 291 77.0
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 1.5e-111 407.1 382 60.2
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 1.4e-109 400.6 290 71.7
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 1.3e-102 377.5 321 63.6
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.7e-99 367.1 240 78.8
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 4.6e-84 315.8 247 72.1
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 3.4e-79 299.7 347 47.8
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 3.4e-79 299.7 294 58.8
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 1.4e-77 294.3 296 61.8
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.9e-77 293.9 201 74.6
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 1.2e-76 291.2 428 45.6
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 6.0e-76 288.9 317 50.2
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 1.3e-73 281.2 328 47.0
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 6.2e-73 278.9 283 59.7
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 8.4e-70 268.5 239 56.5
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 2.1e-68 263.8 900 29.0
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 8.2e-65 251.9 470 39.8
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 4.5e-63 246.1 157 79.0
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 1.1e-53 214.9 144 76.4
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 4.2e-45 186.4 157 65.0
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 1.2e-39 168.3 124 69.4
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 5.9e-39 166.0 120 75.0
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 5.3e-32 142.9 178 50.0
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.3e-30 138.3 324 31.8
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 2.2e-25 120.9 82 75.6
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 1.5e-13 81.6 46 84.8
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 4.3e-13 80.1 48 81.2
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 1.6e-12 78.2 80 56.2
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 3.6e-12 77.0 261 25.7
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 1.0e-11 75.5 211 29.9
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 1.8e-11 74.7 49 73.5
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 1.6e-07 61.6 73 52.1


User provided reference genes

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