Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2547.3 1268 100.0
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2513.4 1268 98.7
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2247.6 1267 87.4
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2239.9 1267 87.1
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2229.9 1267 86.3
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2229.5 1267 86.0
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2223.7 1271 86.1
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2214.1 1268 85.8
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2210.3 1268 86.0
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2209.9 1267 86.3
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2203.7 1268 85.2
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2202.6 1270 84.9
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2198.7 1269 85.0
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2195.6 1267 84.8
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2192.2 1268 85.1
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2190.6 1268 84.9
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2188.3 1268 85.0
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2187.9 1270 84.7
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2186.8 1268 84.9
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2186.8 1268 84.9
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2183.7 1270 84.9
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2182.9 1268 84.8
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2182.5 1268 84.5
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2181.4 1268 84.5
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2180.2 1269 84.9
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2180.2 1268 84.5
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2179.8 1271 83.9
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2176.4 1267 84.5
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2171.4 1268 84.0
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2170.6 1268 84.0
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2169.8 1269 83.7
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2169.0 1267 83.4
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2168.3 1270 83.9
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2167.5 1267 83.0
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2167.1 1267 83.0
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2167.1 1268 82.9
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2166.7 1271 83.0
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2166.7 1267 83.2
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2166.0 1267 82.8
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2163.7 1267 83.3
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2163.7 1267 84.0
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2162.9 1268 82.8
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2161.7 1268 82.6
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2161.3 1267 83.2
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2160.2 1267 83.4
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1268 82.6
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1270 83.0
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1267 83.6
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2158.3 1267 83.8
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2158.3 1269 82.7
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2156.7 1268 82.7
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2155.2 1267 82.9
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2154.8 1264 83.3
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2154.4 1268 83.2
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2154.0 1267 83.6
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2151.7 1267 83.3
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2151.7 1268 83.6
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2151.3 1270 82.8
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2148.6 1261 83.9
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2145.9 1266 82.5
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2144.4 1271 82.2
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2144.4 1269 82.4
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2142.9 1239 84.8
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2142.1 1267 83.2
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2141.7 1267 82.7
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2140.9 1266 82.9
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2140.9 1266 82.8
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2138.2 1268 83.1
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2134.8 1267 82.4
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2134.0 1269 81.9
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2133.6 1267 83.1
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2127.1 1268 81.5
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2125.9 1270 81.5
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2125.9 1264 82.7
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2124.7 1269 81.7
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2123.2 1270 81.7
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2120.1 1270 82.1
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2119.7 1267 82.9
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2115.5 1266 81.2
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2113.6 1266 82.0
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2112.8 1267 82.2
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2108.2 1271 82.9
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2105.5 1247 83.2
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2101.2 1266 81.4
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2101.2 1269 80.5
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2100.5 1274 81.9
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2098.6 1208 85.8
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2075.4 1269 80.1
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2072.7 1267 80.2
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2068.5 1269 80.5
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2056.6 1271 81.4
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2040.8 1159 87.1
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2034.2 1275 77.0
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2005.7 1268 78.1
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1989.5 1269 77.2
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1961.8 1273 76.0
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1939.9 1276 73.5
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1900.9 1191 78.9
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1889.8 1278 73.1
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1846.2 1245 73.3
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1831.6 1070 82.8
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1828.5 1267 71.7
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1797.3 1089 81.3
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1783.8 1130 78.6
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1780.0 1268 71.4
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1752.6 1269 70.4
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1618.6 963 81.2
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1570.4 1322 62.1
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1556.6 1046 73.4
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1368.6 1266 60.1
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1355.5 817 81.6
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1347.0 1339 54.2
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1330.1 1397 52.6
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1275.8 726 86.6
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1136.3 1018 60.7
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1122.1 809 71.1
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.1e-264 917.5 502 89.6
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 1.9e-264 916.8 571 79.7
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.9e-261 906.7 1242 41.5
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-223 781.2 653 61.1
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 2.6e-218 763.5 527 73.8
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 8.9e-198 695.3 457 78.1
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 9.2e-187 658.7 389 85.1
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 8.2e-135 486.1 359 70.8
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 8.2e-119 433.0 313 72.5
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 9.4e-107 392.9 270 73.0
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 5.7e-80 303.9 479 41.8
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.4e-70 272.7 169 74.0
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.6e-69 267.7 169 73.4
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.9e-68 264.6 169 72.2
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-63 249.6 138 90.6
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 1.1e-59 236.5 245 54.3
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 6.6e-52 210.7 117 83.8
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.7e-45 188.7 154 66.9
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 5.3e-41 174.5 91 90.1
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 3.5e-37 161.8 182 53.8
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 1.1e-33 150.2 100 66.0
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 9.6e-27 127.1 104 62.5


User provided reference genes

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