Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7138 Papaver somniferum HOM05D006820 ORTHO05D008526 2.1e-126 455.7 226 100.0
PSO541G0178 Papaver somniferum HOM05D006820 ORTHO05D008526 1.2e-110 403.3 226 88.1
PSO675G9330 Papaver somniferum HOM05D006820 ORTHO05D008526 1.0e-109 400.2 226 87.6
Nn6g31730 Nelumbo nucifera HOM05D006820 ORTHO05D008526 1.5e-84 316.6 229 65.9
TAR625G0986 Trochodendron aralioides HOM05D006820 ORTHO05D008526 1.5e-84 316.6 229 67.2
Lsat_1_v5_gn_8_120400 Lactuca sativa HOM05D006820 ORTHO05D008526 2.4e-82 309.3 225 67.6
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 3.2e-82 308.9 229 66.8
Atru.chr5.3527 Acer truncatum HOM05D006820 ORTHO05D008526 2.7e-81 305.8 221 67.9
Lj9A405G64 Lonicera japonica HOM05D006820 ORTHO05D008526 4.6e-81 305.1 229 65.1
PSO170G2156 Papaver somniferum HOM05D006820 ORTHO05D008526 4.6e-81 305.1 170 87.6
Aqoxy6G01707 Aquilegia oxysepala HOM05D006820 ORTHO05D008526 1.7e-80 303.1 223 68.2
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 5.1e-80 301.6 221 67.9
Ah.01g007660 Amaranthus hybridus HOM05D006820 ORTHO05D008526 6.6e-80 301.2 220 66.4
AUR62012929 Chenopodium quinoa HOM05D006820 ORTHO05D008526 6.6e-80 301.2 229 65.5
Peaxi162Scf00362g00246 Petunia axillaris HOM05D006820 ORTHO05D008526 6.6e-80 301.2 224 66.5
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 1.9e-79 299.7 223 65.0
Manes.04G064800 Manihot esculenta HOM05D006820 ORTHO05D008526 2.5e-79 299.3 221 67.4
AUR62011713 Chenopodium quinoa HOM05D006820 ORTHO05D008526 4.3e-79 298.5 228 65.8
PGR142G1762 Punica granatum HOM05D006820 ORTHO05D008526 4.3e-79 298.5 224 68.3
Ciclev10029216m.g Citrus clementina HOM05D006820 ORTHO05D008526 7.3e-79 297.7 228 65.8
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 7.3e-79 297.7 219 67.6
GSVIVG01023895001 Vitis vinifera HOM05D006820 ORTHO05D008526 2.1e-78 296.2 221 65.2
CANSAT25G2916 Cannabis sativa HOM05D006820 ORTHO05D008526 4.8e-78 295.0 223 64.1
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 8.1e-78 294.3 221 65.6
Potri.009G165400 Populus trichocarpa HOM05D006820 ORTHO05D008526 1.1e-77 293.9 225 65.8
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.4e-77 293.5 221 67.0
vmacro17294 Vaccinium macrocarpon HOM05D006820 ORTHO05D008526 1.4e-77 293.5 229 63.3
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 1.8e-77 293.1 221 64.3
Nitab4.5_0011212g0060 Nicotiana tabacum HOM05D006820 ORTHO05D008526 2.4e-77 292.7 231 62.3
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 3.1e-77 292.4 229 64.6
QL11p053925 Quercus lobata HOM05D006820 ORTHO05D008526 3.1e-77 292.4 236 64.4
CAN.G1725.10 Capsicum annuum HOM05D006820 ORTHO05D008526 6.9e-77 291.2 221 64.7
HanXRQChr14g0459061 Helianthus annuus HOM05D006820 ORTHO05D008526 6.9e-77 291.2 233 63.9
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 1.2e-76 290.4 221 64.7
Eucgr.I01511 Eucalyptus grandis HOM05D006820 ORTHO05D008526 2.0e-76 289.7 222 65.3
Gorai.008G040700 Gossypium raimondii HOM05D006820 ORTHO05D008526 2.6e-76 289.3 226 63.7
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 4.4e-76 288.5 229 63.8
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 4.4e-76 288.5 221 63.3
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 9.9e-76 287.3 221 62.9
Migut.B00016 Erythranthe guttata HOM05D006820 ORTHO05D008526 1.3e-75 287.0 224 63.4
CiPaw.06G118200 Carya illinoinensis HOM05D006820 ORTHO05D008526 1.7e-75 286.6 221 63.8
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 2.9e-75 285.8 223 63.2
Aa31LG6G16790 Aethionema arabicum HOM05D006820 ORTHO05D008526 3.8e-75 285.4 226 59.7
arahy.Tifrunner.gnm1.ann1.6J1J15 Arachis hypogaea HOM05D006820 ORTHO05D008526 3.8e-75 285.4 229 61.1
Medtr5g099030 Medicago truncatula HOM05D006820 ORTHO05D008526 3.8e-75 285.4 224 62.1
Carub.0007s0026 Capsella rubella HOM05D006820 ORTHO05D008526 8.4e-75 284.3 219 62.1
unitig_0.g2740 Utricularia gibba HOM05D006820 ORTHO05D008526 1.4e-74 283.5 228 62.7
EL10Ac9g21258 Beta vulgaris HOM05D006820 ORTHO05D008526 1.9e-74 283.1 221 64.3
DCAR_015665 Daucus carota HOM05D006820 ORTHO05D008526 1.9e-74 283.1 225 60.4
PSO675G0855 Papaver somniferum HOM05D006820 ORTHO05D008526 1.9e-74 283.1 225 63.6
TWI79G0714 Tripterygium wilfordii HOM05D006820 ORTHO05D008526 1.9e-74 283.1 219 62.1
Thhalv10004876m.g Eutrema salsugineum HOM05D006820 ORTHO05D008526 2.4e-74 282.7 220 61.8
PSO541G2729 Papaver somniferum HOM05D006820 ORTHO05D008526 2.4e-74 282.7 223 64.1
Hund06169 Selenicereus undatus HOM05D006820 ORTHO05D008526 2.4e-74 282.7 224 60.3
BcaC01g00221 Brassica carinata HOM05D006820 ORTHO05D008526 3.2e-74 282.3 222 62.6
BraA08t34377Z Brassica rapa HOM05D000807 ORTHO05D000662 3.2e-74 282.3 221 62.9
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 3.2e-74 282.3 223 62.8
SGA_v2.0_scaffold58G20319 Striga asiatica HOM05D006820 ORTHO05D008526 3.2e-74 282.3 229 61.1
AT4G38370 Arabidopsis thaliana HOM05D006820 ORTHO05D008526 4.2e-74 282.0 218 61.0
BcaC01g00229 Brassica carinata HOM05D006820 ORTHO05D008526 5.4e-74 281.6 223 61.9
Phvul.008G291600 Phaseolus vulgaris HOM05D006820 ORTHO05D008526 5.4e-74 281.6 221 62.9
AL7G10240 Arabidopsis lyrata HOM05D006820 ORTHO05D008526 7.1e-74 281.2 218 61.0
Sp7g37400 Schrenkiella parvula HOM05D006820 ORTHO05D008526 7.1e-74 281.2 220 61.4
THA.LOC104804082 Tarenaya hassleriana HOM05D006820 ORTHO05D008526 7.1e-74 281.2 226 58.4
ECA233G1752 Erigeron canadensis HOM05D006820 ORTHO05D008526 9.3e-74 280.8 209 65.6
arahy.Tifrunner.gnm1.ann1.696HI2 Arachis hypogaea HOM05D006820 ORTHO05D008526 1.2e-73 280.4 229 60.3
BolC3t19961H Brassica oleracea HOM05D000807 ORTHO05D000662 1.6e-73 280.0 222 62.6
CsaV3_5G012520 Cucumis sativus L. HOM05D006820 ORTHO05D008526 2.1e-73 279.6 230 62.6
BraA08t34346Z Brassica rapa HOM05D006820 ORTHO05D008526 6.0e-73 278.1 222 61.7
RcHm_v2.0_Chr1g0329291 Rosa chinensis HOM05D006820 ORTHO05D008526 1.0e-72 277.3 222 64.0
Glyma.14G001800 Glycine max HOM05D006820 ORTHO05D008526 1.3e-72 276.9 224 61.2
TPR.G18648 Trifolium pratense HOM05D006820 ORTHO05D008526 6.6e-72 274.6 223 60.1
Sc18g0005950 Simmondsia chinensis HOM05D006820 ORTHO05D008526 8.7e-72 274.2 229 59.4
CARHR294110 Cardamine hirsuta HOM05D006820 ORTHO05D008526 1.1e-71 273.9 221 59.3
Haze_02054 Corylus avellana HOM05D006820 ORTHO05D008526 1.1e-71 273.9 242 59.1
LjContig00081g0000354 Lotus japonicus HOM05D006820 ORTHO05D008526 1.1e-71 273.9 221 60.6
ATR0661G540 Amborella trichopoda HOM05D006820 ORTHO05D008526 6.2e-70 268.1 218 61.0
CDE07G0154 Ceratophyllum demersum HOM05D006820 ORTHO05D008526 4.0e-69 265.4 223 59.2
VMungo0647G2489 Vigna mungo HOM05D006820 ORTHO05D008526 4.0e-69 265.4 221 59.7
FvH4_7g04340 Fragaria vesca HOM05D006820 ORTHO05D008526 9.0e-69 264.2 222 60.8
Lalb_Chr10g0095311 Lupinus albus HOM05D006820 ORTHO05D008526 3.4e-68 262.3 221 57.5
FAN01G0447 Fragaria x ananassa HOM05D006820 ORTHO05D008526 3.2e-66 255.8 240 56.7
Gohir.A12G033700 Gossypium hirsutum HOM05D006820 ORTHO05D008526 2.1e-65 253.1 225 58.2
FAN06G4449 Fragaria x ananassa HOM05D006820 ORTHO05D008526 3.5e-65 252.3 240 55.4
FAN03G3185 Fragaria x ananassa HOM05D006820 ORTHO05D008526 6.0e-65 251.5 247 54.7
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 6.2e-62 241.5 235 54.5
Oeu021963.1 Olea europaea HOM05D006820 ORTHO05D008526 5.8e-60 235.0 219 57.5
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 6.5e-59 231.5 223 52.9
Gohir.D12G038800 Gossypium hirsutum HOM05D006820 ORTHO05D008526 3.5e-57 225.7 165 65.5
SMO347G0521 Selaginella moellendorffii HOM05D006820 ORTHO05D008526 2.5e-55 219.5 220 53.6
MELO3C022591.2 Cucumis melo HOM05D006820 ORTHO05D008526 7.4e-55 218.0 165 66.7
Dinv41882 Davidia involucrata HOM05D006820 ORTHO05D008526 9.6e-55 217.6 147 70.7
Rhsim05G0047800 Rhododendron simsii HOM05D006820 ORTHO05D008526 6.3e-54 214.9 237 51.1
COL.COLO4_17938 Corchorus olitorius HOM05D006820 ORTHO05D008526 8.2e-54 214.5 165 65.5
AagrBONN_evm.TU.Sc2ySwM_344.5004 Anthoceros agrestis HOM05D006820 ORTHO05D008526 1.1e-53 214.2 227 48.9
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 5.3e-53 211.8 225 48.4
RhsimUnG0142100 Rhododendron simsii HOM05D006820 ORTHO05D008526 5.3e-53 211.8 237 50.6
Sed0016165 Sechium edule HOM05D006820 ORTHO05D008526 9.0e-53 211.1 170 61.8
Pp3c6_22700 Physcomitrium patens HOM05D006820 ORTHO05D008526 2.0e-52 209.9 225 50.7
Psat2g001280 Pisum sativum HOM05D006820 ORTHO05D008526 1.0e-51 207.6 164 60.4
ClCG02G009990 Citrullus lanatus HOM05D006820 ORTHO05D008526 2.2e-51 206.5 171 60.8
SalBow1G3348 Salvia bowleyana HOM05D006820 ORTHO05D008526 3.8e-51 205.7 172 58.7
Mapoly0119s0027 Marchantia polymorpha HOM05D006820 ORTHO05D008526 4.6e-49 198.7 222 48.6
HPP92_025502 Vanilla planifolia HOM05D006820 ORTHO05D008526 3.4e-44 182.6 166 55.4
HPP92_025534 Vanilla planifolia HOM05D006820 ORTHO05D008526 2.9e-43 179.5 166 54.8
CBR_g8644 Chara braunii HOM05D006820 ORTHO05D008526 7.9e-41 171.4 250 41.2
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 1.1e-39 167.5 116 65.5
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 1.3e-38 164.1 116 62.9
arahy.Tifrunner.gnm1.ann1.MXMJ8X Arachis hypogaea HOM05D006820 ORTHO05D008526 3.1e-37 159.5 144 55.6
Cpa.g.sc20.200 Carica papaya HOM05D006820 ORTHO05D008526 2.0e-31 140.2 126 54.0
MD10G1042800 Malus domestica HOM05D006820 ORTHO05D008526 2.6e-31 139.8 133 57.9
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 4.8e-30 135.6 219 37.4
Cc09_g10680 Coffea canephora HOM05D006820 ORTHO05D008526 4.8e-30 135.6 108 59.3
MD05G1133800 Malus domestica HOM05D006820 ORTHO05D008526 4.8e-30 135.6 149 51.0
CSS0041656 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 1.0e-27 127.9 112 58.0
arahy.Tifrunner.gnm1.ann1.JU0VI1 Arachis hypogaea HOM05D006820 ORTHO05D008526 9.4e-26 121.3 107 58.9
Cc00_g33760 Coffea canephora HOM05D006820 ORTHO05D008526 2.2e-14 83.6 57 66.7
Cc09_g10670 Coffea canephora HOM05D006820 ORTHO05D008526 2.2e-14 83.6 57 66.7
A09p68760 Brassica napus HOM05D006820 ORTHO05D008526 1.3e-11 74.3 95 40.0
BraA09t42215Z Brassica rapa HOM05D006820 ORTHO05D008526 1.3e-11 74.3 95 40.0
AUR62010100 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.6e-09 67.4 69 49.3
arahy.Tifrunner.gnm1.ann1.E18LML Arachis hypogaea HOM05D006820 ORTHO05D008526 2.6e-07 60.1 47 59.6
Ah.04g159830 Amaranthus hybridus HOM05D002021 ORTHO05D002077 3.7e-06 56.2 176 28.4


User provided reference genes

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