Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 5.4e-198 694.1 349 100.0
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 8.7e-188 660.2 349 95.4
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 2.4e-153 545.8 349 78.8
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 1.5e-152 543.1 344 75.9
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 6.5e-151 537.7 344 77.3
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.9e-150 536.2 344 74.1
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 1.2e-149 533.5 353 75.6
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 2.1e-149 532.7 345 74.8
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 1.4e-148 530.0 345 72.2
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 2.3e-148 529.3 342 74.3
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 2.3e-148 529.3 345 74.8
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 3.0e-148 528.9 346 73.1
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 6.7e-148 527.7 346 74.0
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 1.1e-147 526.9 348 74.1
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 2.0e-147 526.2 339 73.7
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 3.3e-147 525.4 347 72.3
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 4.4e-147 525.0 349 71.6
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 4.4e-147 525.0 346 72.3
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 5.7e-147 524.6 341 74.2
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.3e-146 523.5 338 73.7
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.3e-146 523.5 345 73.3
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 2.2e-146 522.7 342 73.4
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.8e-146 522.3 354 73.2
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.1e-145 520.4 346 72.5
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 4.1e-145 518.5 337 73.6
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 5.3e-145 518.1 341 72.1
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 7.0e-145 517.7 348 71.3
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.6e-144 516.5 347 70.9
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 1.6e-144 516.5 346 73.1
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 2.0e-144 516.2 347 72.3
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.6e-144 515.8 343 72.6
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 3.5e-144 515.4 341 72.1
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 5.9e-144 514.6 346 71.4
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 5.9e-144 514.6 344 70.3
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 7.7e-144 514.2 345 72.2
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.0e-143 513.8 341 71.8
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.2e-143 512.7 341 71.6
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 2.9e-143 512.3 317 75.4
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.8e-143 511.9 343 71.7
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 3.8e-143 511.9 348 71.3
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 6.5e-143 511.1 318 74.8
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 8.5e-143 510.8 349 69.6
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 8.5e-143 510.8 343 71.1
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 1.5e-142 510.0 343 70.6
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 1.9e-142 509.6 315 74.3
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.9e-142 509.6 341 69.8
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 5.5e-142 508.1 342 71.9
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 7.2e-142 507.7 350 71.4
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 9.4e-142 507.3 346 70.2
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 9.4e-142 507.3 346 70.2
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 1.2e-141 506.9 335 72.8
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.6e-141 506.5 336 73.2
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 2.1e-141 506.1 346 70.2
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 2.1e-141 506.1 350 71.7
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 2.1e-141 506.1 335 71.3
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 8.0e-141 504.2 343 72.3
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.0e-140 503.8 346 69.7
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.4e-140 503.4 346 69.9
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 2.3e-140 502.7 346 69.7
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 3.0e-140 502.3 346 69.4
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 4.0e-140 501.9 339 72.0
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 4.0e-140 501.9 346 69.7
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 4.0e-140 501.9 345 71.0
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 5.2e-140 501.5 346 69.4
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 6.7e-140 501.1 346 69.4
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 6.7e-140 501.1 344 68.9
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 2.0e-139 499.6 341 70.4
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 3.3e-139 498.8 346 68.5
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 2.2e-138 496.1 338 70.7
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 3.7e-138 495.4 306 76.8
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 6.3e-138 494.6 302 76.2
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.4e-137 493.4 346 68.2
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 2.7e-136 489.2 344 70.1
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 2.7e-136 489.2 342 68.4
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 5.0e-135 485.0 343 67.6
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 3.2e-134 482.3 341 70.1
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 5.5e-134 481.5 335 70.1
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 7.2e-134 481.1 375 66.1
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 9.4e-134 480.7 346 69.1
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 1.5e-131 473.4 339 67.0
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 4.4e-131 471.9 335 67.2
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 6.3e-130 468.0 345 65.2
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 2.7e-128 462.6 318 66.7
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.7e-128 462.6 341 66.6
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 4.7e-125 451.8 335 64.8
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.6e-120 436.8 263 78.7
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.2e-117 427.2 311 64.0
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.8e-116 423.3 343 62.4
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 3.7e-114 415.6 256 77.7
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.1e-109 399.8 367 57.8
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 4.9e-106 388.7 530 45.7
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 1.4e-105 387.1 340 57.9
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.9e-105 386.7 341 58.4
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.2e-104 384.0 337 59.1
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 4.3e-102 375.6 229 77.3
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 4.3e-102 375.6 367 57.2
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 3.2e-97 359.4 249 73.1
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 2.7e-96 356.3 222 77.0
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.8e-84 317.0 190 77.4
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 1.2e-83 314.3 336 52.4
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 7.1e-73 278.5 163 76.1
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.0e-71 274.6 403 38.7
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 2.4e-68 263.5 177 73.4
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 2.0e-67 260.4 325 44.9
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 4.5e-67 259.2 217 55.8
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 7.1e-57 225.3 131 80.2
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 4.5e-51 206.1 127 74.8
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.3e-50 204.5 345 35.7
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 8.5e-50 201.8 326 38.7
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 7.9e-48 195.3 126 72.2
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.4e-41 174.5 103 73.8
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.1e-39 166.0 97 82.5
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 6.1e-32 142.5 84 77.4
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.0e-23 115.2 81 64.2
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 4.0e-23 113.2 61 83.6
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.0e-15 87.0 76 60.5
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.2e-14 85.1 56 78.6
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 5.0e-10 69.7 38 76.3
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 2.1e-08 64.3 54 51.9


User provided reference genes

Program Settings