Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 7.0e-113 410.6 205 100.0
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 6.8e-108 394.0 205 97.1
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 2.2e-66 256.1 202 66.3
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 2.1e-64 249.6 207 61.8
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 1.6e-61 240.0 195 66.2
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 6.3e-61 238.0 221 57.9
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 1.4e-60 236.9 204 61.8
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 1.8e-60 236.5 211 57.8
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 9.0e-60 234.2 198 62.1
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 1.2e-59 233.8 201 60.2
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 1.5e-59 233.4 204 60.3
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 2.6e-59 232.6 204 59.8
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 3.4e-59 232.3 204 59.3
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 7.6e-59 231.1 208 58.7
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 1.7e-58 229.9 208 57.2
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 2.9e-58 229.2 201 59.2
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 6.5e-58 228.0 211 56.9
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.1e-57 227.3 211 57.8
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 4.2e-57 225.3 196 59.2
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 5.5e-57 224.9 204 56.4
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 9.3e-57 224.2 203 56.2
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 9.3e-57 224.2 208 58.2
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 1.2e-56 223.8 204 57.8
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 1.6e-56 223.4 192 58.3
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 1.6e-56 223.4 202 57.4
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 1.6e-56 223.4 201 58.7
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 2.7e-56 222.6 195 59.0
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 3.6e-56 222.2 193 60.1
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 3.6e-56 222.2 193 60.1
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 4.6e-56 221.9 201 59.2
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 4.6e-56 221.9 208 56.7
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 1.3e-55 220.3 205 57.1
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 1.8e-55 219.9 193 59.6
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 2.3e-55 219.5 192 60.4
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 2.3e-55 219.5 198 59.6
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 3.0e-55 219.2 205 56.6
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 3.9e-55 218.8 193 60.1
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 3.9e-55 218.8 205 56.6
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 3.9e-55 218.8 198 58.1
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 3.9e-55 218.8 198 60.1
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 6.7e-55 218.0 201 59.2
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 1.1e-54 217.2 193 59.1
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 2.5e-54 216.1 203 54.7
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 2.5e-54 216.1 218 52.8
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 4.3e-54 215.3 193 59.1
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 4.3e-54 215.3 194 57.7
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 5.7e-54 214.9 199 56.3
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 9.7e-54 214.2 205 56.6
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 9.7e-54 214.2 205 56.1
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 9.7e-54 214.2 200 56.0
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 1.3e-53 213.8 195 57.4
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 1.3e-53 213.8 193 58.5
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 1.6e-53 213.4 204 54.9
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 2.2e-53 213.0 201 54.7
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 2.8e-53 212.6 199 57.8
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 2.8e-53 212.6 190 55.3
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 3.7e-53 212.2 193 57.0
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 3.7e-53 212.2 198 57.6
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 3.1e-52 209.1 198 54.0
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 4.1e-52 208.8 198 56.6
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 5.3e-52 208.4 206 52.9
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 5.3e-52 208.4 198 56.1
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 1.2e-51 207.2 200 55.0
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 2.6e-51 206.1 204 54.9
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 5.9e-51 204.9 198 56.1
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 5.9e-51 204.9 198 57.1
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 1.7e-50 203.4 187 54.5
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 2.2e-50 203.0 196 54.6
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 2.9e-50 202.6 202 53.5
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 3.8e-50 202.2 196 55.6
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 5.0e-50 201.8 191 56.0
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 6.5e-50 201.4 201 52.7
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 8.5e-50 201.1 212 52.4
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 2.5e-49 199.5 205 53.7
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 3.6e-48 195.7 146 66.4
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 6.1e-48 194.9 175 57.7
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 7.9e-48 194.5 201 51.2
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 5.1e-47 191.8 154 63.6
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 2.0e-46 189.9 245 46.5
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 5.7e-46 188.3 141 65.2
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 7.4e-46 188.0 220 45.0
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 3.7e-45 185.7 193 50.8
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.4e-44 183.7 229 46.7
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 2.4e-44 183.0 169 58.0
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 5.3e-44 181.8 145 62.1
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 9.1e-44 181.0 228 46.5
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 1.7e-42 176.8 149 61.1
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 1.2e-40 170.6 118 63.6
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 2.1e-40 169.9 185 46.5
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 3.6e-40 169.1 140 55.0
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 1.4e-39 167.2 152 58.6
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 5.2e-39 165.2 207 46.4
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 3.8e-34 149.1 150 50.0
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 6.5e-34 148.3 156 48.1
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 3.2e-33 146.0 267 36.0
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 7.2e-33 144.8 113 68.1
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 3.6e-32 142.5 285 35.4
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 3.0e-31 139.4 129 54.3
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 9.7e-30 134.4 128 56.2
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 5.3e-28 128.6 161 44.7
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 1.3e-26 124.0 113 55.8
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 2.9e-26 122.9 94 67.0
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 4.0e-23 112.5 114 53.5
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 4.1e-20 102.4 200 36.0
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 2.3e-18 96.7 81 60.5
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 2.5e-17 93.2 144 34.7
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 9.5e-17 91.3 86 58.1
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 1.8e-15 87.0 89 50.6
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 2.3e-15 86.7 75 57.3
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 1.1e-12 77.8 121 38.0
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 4.3e-09 65.9 78 46.2
Hund18476 Selenicereus undatus HOM05D007131 ORTHO05D009026 8.9e-07 58.2 128 35.2


User provided reference genes

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