Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 5.7e-132 474.2 226 100.0
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 5.0e-104 381.3 229 79.0
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 1.9e-103 379.4 216 81.9
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 4.3e-103 378.3 215 80.5
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 5.6e-103 377.9 215 80.5
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 2.1e-102 375.9 215 80.0
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 8.1e-102 374.0 215 80.9
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 1.2e-100 370.2 214 79.9
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 2.0e-100 369.4 206 81.6
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 2.6e-100 369.0 180 96.7
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 3.4e-100 368.6 214 80.8
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 3.4e-100 368.6 214 78.5
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 3.4e-100 368.6 215 79.1
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 5.8e-100 367.9 213 77.9
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 2.9e-99 365.5 226 75.7
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 6.4e-99 364.4 217 77.9
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 8.3e-99 364.0 205 80.5
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 8.3e-99 364.0 218 78.0
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 1.1e-98 363.6 217 78.8
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 1.1e-98 363.6 218 77.1
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 1.9e-98 362.8 206 79.6
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.4e-98 362.5 215 78.1
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 3.2e-98 362.1 213 78.9
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 4.1e-98 361.7 214 77.6
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 7.1e-98 360.9 215 77.2
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 9.2e-98 360.5 217 77.4
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 2.1e-97 359.4 225 74.7
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 2.1e-97 359.4 208 77.9
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 2.7e-97 359.0 215 77.7
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 2.7e-97 359.0 215 76.7
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 3.5e-97 358.6 203 78.3
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 4.6e-97 358.2 203 77.8
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 4.6e-97 358.2 212 78.3
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 3.0e-96 355.5 212 77.4
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 3.0e-96 355.5 213 76.5
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 3.0e-96 355.5 214 76.2
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 3.0e-96 355.5 215 75.3
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 6.6e-96 354.4 218 76.6
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 6.6e-96 354.4 206 79.1
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 1.1e-95 353.6 222 75.2
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 1.1e-95 353.6 215 74.9
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 1.9e-95 352.8 220 75.5
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 1.9e-95 352.8 204 77.5
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 3.3e-95 352.1 211 76.8
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 3.3e-95 352.1 212 77.8
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 4.3e-95 351.7 215 75.8
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 7.3e-95 350.9 229 70.7
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 1.2e-94 350.1 219 74.9
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 2.1e-94 349.4 226 71.2
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 2.1e-94 349.4 217 73.7
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.8e-94 349.0 215 75.3
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 2.8e-94 349.0 214 74.3
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 1.8e-93 346.3 207 75.4
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 1.2e-92 343.6 198 80.8
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 2.0e-92 342.8 225 72.0
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 3.4e-92 342.0 217 73.3
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 7.6e-92 340.9 214 73.4
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 9.9e-92 340.5 204 76.0
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 1.3e-91 340.1 212 73.1
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 2.9e-91 339.0 224 70.5
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 8.3e-91 337.4 200 75.0
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 4.1e-90 335.1 213 72.3
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 2.7e-89 332.4 220 70.0
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 6.0e-89 331.3 217 70.5
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 1.0e-88 330.5 214 72.0
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 3.3e-87 325.5 215 70.7
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 5.6e-87 324.7 201 75.6
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 7.3e-87 324.3 201 75.1
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 7.3e-87 324.3 201 75.1
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 7.3e-87 324.3 201 75.1
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.2e-86 323.6 208 72.1
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 1.6e-86 323.2 215 69.3
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 2.1e-86 322.8 211 71.6
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 4.7e-86 321.6 203 72.9
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 6.2e-86 321.2 193 74.6
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 8.1e-86 320.9 204 71.6
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 1.4e-85 320.1 215 70.2
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 2.4e-85 319.3 222 70.7
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 1.2e-84 317.0 217 70.0
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 1.2e-84 317.0 217 70.0
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 4.9e-83 311.6 178 79.8
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 1.1e-82 310.5 182 75.8
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 1.9e-82 309.7 187 74.3
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 4.0e-77 292.0 204 68.6
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 9.0e-77 290.8 242 57.0
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 4.2e-74 282.0 179 73.7
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 2.3e-72 276.2 221 65.2
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 2.5e-71 272.7 185 64.9
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 3.1e-69 265.8 198 60.1
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 9.9e-68 260.8 152 75.7
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.2e-67 259.6 161 73.9
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 8.4e-67 257.7 217 63.1
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 9.6e-63 244.2 227 52.0
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 1.1e-61 240.7 187 55.6
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 5.3e-61 238.4 206 56.3
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 1.0e-56 224.2 140 73.6
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 3.3e-55 219.2 126 77.8
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 9.0e-53 211.1 130 72.3
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 4.1e-45 185.7 143 63.6
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 2.6e-44 183.0 115 73.9
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 7.7e-44 181.4 144 53.5
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 4.6e-41 172.2 86 94.2
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 6.1e-41 171.8 104 73.1
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 3.3e-39 166.0 200 37.5
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 3.8e-35 152.5 128 61.7
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 4.2e-34 149.1 128 59.4
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 6.1e-33 145.2 215 32.1
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 1.1e-29 134.4 96 59.4
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 4.5e-28 129.0 153 37.3
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 1.3e-27 127.5 77 71.4
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 5.5e-26 122.1 72 70.8
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 4.1e-21 105.9 64 67.2
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.9e-18 97.1 53 75.5
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 3.2e-18 96.3 51 76.5
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 5.2e-16 89.0 71 59.2
CBR_g50885 Chara braunii HOM05D006727 ORTHO05D008408 1.2e-15 87.8 129 36.4
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 1.7e-11 73.9 60 66.7
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 5.0e-11 72.4 54 61.1
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 6.8e-08 62.0 93 44.1


User provided reference genes

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