Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 3.1e-159 565.1 288 100.0
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 5.0e-157 557.8 288 99.3
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 1.7e-104 383.3 286 69.9
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 5.4e-103 378.3 287 69.3
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 7.1e-103 377.9 231 78.4
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 7.1e-103 377.9 247 74.1
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 7.1e-103 377.9 288 68.1
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.1e-102 376.3 230 79.6
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 7.9e-102 374.4 287 67.9
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 7.9e-102 374.4 247 74.1
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.7e-101 373.2 231 77.1
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 2.3e-101 372.9 285 67.0
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 2.3e-101 372.9 285 67.0
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 2.3e-101 372.9 247 74.1
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 3.9e-101 372.1 295 67.8
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.5e-100 369.4 227 78.0
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 4.3e-100 368.6 281 66.9
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 4.3e-100 368.6 287 66.9
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 5.6e-100 368.2 234 75.6
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 7.4e-100 367.9 257 70.8
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 3.6e-99 365.5 235 76.2
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.6e-99 365.5 284 67.3
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 4.8e-99 365.2 289 67.1
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 6.2e-99 364.8 289 64.4
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 8.1e-99 364.4 264 71.6
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.1e-98 364.0 235 75.7
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 2.4e-98 362.8 229 75.5
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 2.4e-98 362.8 289 66.4
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 3.1e-98 362.5 228 76.8
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 4.0e-98 362.1 303 64.4
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 9.0e-98 360.9 228 77.2
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 1.2e-97 360.5 281 65.8
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.0e-97 359.8 284 66.2
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 2.0e-97 359.8 293 65.2
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 2.0e-97 359.8 290 64.8
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 2.6e-97 359.4 267 68.5
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 2.6e-97 359.4 288 64.2
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 2.6e-97 359.4 288 64.2
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 2.6e-97 359.4 229 76.4
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.5e-97 358.6 249 71.1
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 5.8e-97 358.2 291 64.6
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 5.8e-97 358.2 293 64.5
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 7.6e-97 357.8 255 69.8
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 9.9e-97 357.5 284 66.2
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.3e-96 357.1 287 64.1
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 1.3e-96 357.1 231 74.0
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 2.2e-96 356.3 286 65.0
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 2.9e-96 355.9 231 74.9
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 3.8e-96 355.5 248 71.4
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 4.9e-96 355.1 232 74.1
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 4.9e-96 355.1 290 62.8
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 6.4e-96 354.8 228 75.9
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 8.4e-96 354.4 282 63.8
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 8.4e-96 354.4 280 63.6
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.1e-95 354.0 311 62.1
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.4e-95 353.6 229 75.1
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 1.9e-95 353.2 247 71.3
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.4e-95 352.8 265 67.2
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 2.4e-95 352.8 268 67.9
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 3.2e-95 352.4 227 74.4
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 3.2e-95 352.4 228 75.9
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 3.2e-95 352.4 229 74.7
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 4.2e-95 352.1 287 62.0
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 4.2e-95 352.1 293 63.5
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.2e-95 352.1 285 66.7
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 9.3e-95 350.9 227 75.8
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 9.3e-95 350.9 238 73.1
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 1.6e-94 350.1 227 75.8
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 2.1e-94 349.7 288 62.8
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 2.1e-94 349.7 223 76.7
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 3.5e-94 349.0 264 68.6
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 6.0e-94 348.2 231 73.6
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 7.9e-94 347.8 249 68.3
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 7.9e-94 347.8 229 74.2
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.8e-93 346.7 234 72.6
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 3.0e-93 345.9 248 70.2
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 6.7e-93 344.7 324 58.0
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 1.1e-92 344.0 227 74.4
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 2.5e-92 342.8 228 73.7
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 4.3e-92 342.0 233 71.7
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 5.6e-92 341.7 228 73.2
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-91 340.5 263 68.1
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.7e-91 339.0 264 67.8
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.7e-91 339.0 264 67.8
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 3.7e-91 339.0 287 60.6
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.8e-91 338.6 264 67.8
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 6.2e-91 338.2 231 71.9
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 1.1e-90 337.4 231 71.0
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 5.3e-90 335.1 229 72.1
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.5e-89 333.6 289 60.6
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 2.0e-89 333.2 230 72.2
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.0e-88 330.9 227 69.6
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.3e-88 330.5 205 77.6
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 1.7e-88 330.1 293 60.1
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 1.3e-85 320.5 341 53.4
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 3.9e-85 318.9 369 50.1
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.5e-84 317.0 210 74.8
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 4.8e-83 312.0 239 62.8
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 7.4e-76 288.1 227 63.4
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 6.3e-75 285.0 242 62.4
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.0e-73 280.0 212 68.4
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 5.9e-73 278.5 242 56.2
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 5.5e-71 271.9 231 58.4
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 7.4e-68 261.5 202 60.9
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 3.1e-66 256.1 203 66.5
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 9.4e-63 244.6 223 61.0
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 7.9e-62 241.5 215 60.9
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.8e-61 240.4 208 58.2
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 5.0e-40 169.1 266 42.1
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 7.0e-34 148.7 172 50.6
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 2.3e-32 143.7 194 45.4
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 2.3e-32 143.7 299 35.5
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.0e-29 133.3 91 73.6
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.2e-28 131.3 160 41.9
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 2.2e-27 127.1 89 73.0
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 9.2e-26 121.7 87 70.1
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 3.0e-24 116.7 130 45.4
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 6.6e-08 62.4 105 41.0
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 3.6e-06 56.6 80 40.0


User provided reference genes

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