Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 6.1e-100 367.5 182 100.0
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 5.3e-88 327.8 182 89.6
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 3.5e-79 298.5 182 83.5
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 4.1e-64 248.4 139 87.1
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 4.9e-41 171.8 198 51.0
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 2.4e-40 169.5 187 49.7
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 9.2e-40 167.5 197 47.2
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 9.2e-40 167.5 190 49.5
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 3.9e-38 162.2 199 46.2
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 3.9e-38 162.2 186 50.0
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-37 160.2 162 53.1
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 3.3e-37 159.1 185 49.2
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 2.8e-36 156.0 200 45.5
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 3.6e-36 155.6 142 56.3
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 6.2e-36 154.8 184 47.8
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 8.1e-36 154.5 198 48.5
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 2.3e-35 152.9 197 43.7
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 4.0e-35 152.1 202 44.6
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 4.0e-35 152.1 193 46.1
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 5.2e-35 151.8 197 43.7
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 1.2e-34 150.6 204 43.6
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 1.2e-34 150.6 150 52.7
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 1.2e-34 150.6 193 45.6
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 2.0e-34 149.8 205 43.4
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 2.0e-34 149.8 205 43.4
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 9.9e-34 147.5 121 61.2
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 8.4e-33 144.4 157 51.6
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 1.4e-32 143.7 123 56.9
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.4e-32 143.7 147 53.1
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 2.4e-32 142.9 177 46.9
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 2.4e-32 142.9 203 40.9
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.4e-32 142.9 210 42.4
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 2.4e-32 142.9 199 42.2
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 3.2e-32 142.5 128 55.5
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 4.1e-32 142.1 150 52.7
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 4.1e-32 142.1 200 46.0
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 5.4e-32 141.7 149 53.0
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 5.4e-32 141.7 183 43.2
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 7.1e-32 141.4 147 53.7
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 7.1e-32 141.4 149 53.0
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 1.2e-31 140.6 138 51.4
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 1.2e-31 140.6 139 53.2
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.1e-31 139.8 212 43.4
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 2.1e-31 139.8 136 54.4
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 2.7e-31 139.4 223 39.9
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 3.5e-31 139.0 199 42.7
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 3.5e-31 139.0 133 54.9
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 4.6e-31 138.7 139 56.1
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 6.0e-31 138.3 208 42.3
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 6.0e-31 138.3 184 46.2
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 7.8e-31 137.9 137 56.2
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 1.3e-30 137.1 204 42.2
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 6.6e-30 134.8 196 42.9
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 6.6e-30 134.8 199 41.7
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 6.6e-30 134.8 196 43.9
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 8.6e-30 134.4 121 57.0
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 8.6e-30 134.4 206 40.3
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.1e-29 134.0 178 43.8
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 1.5e-29 133.7 184 45.1
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 1.5e-29 133.7 137 52.6
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 1.5e-29 133.7 215 40.9
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.9e-29 133.3 87 73.6
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.5e-29 132.9 135 55.6
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.6e-29 131.7 135 54.8
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 9.6e-29 131.0 135 56.3
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 1.2e-28 130.6 187 40.1
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.2e-28 130.6 107 63.6
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.6e-28 130.2 135 55.6
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 1.6e-28 130.2 183 44.8
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 6.2e-28 128.3 102 58.8
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 8.1e-28 127.9 203 40.4
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 8.1e-28 127.9 150 48.7
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 8.1e-28 127.9 85 71.8
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.4e-27 127.1 145 48.3
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.4e-27 127.1 145 48.3
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 1.8e-27 126.7 198 42.4
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.4e-27 126.3 135 54.1
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 2.4e-27 126.3 203 39.9
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 5.2e-27 125.2 181 40.9
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.2e-27 125.2 135 54.1
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 5.2e-27 125.2 149 49.7
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 6.9e-27 124.8 87 64.4
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 6.9e-27 124.8 128 50.0
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 1.2e-26 124.0 186 39.2
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 2.0e-26 123.2 139 51.1
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 2.0e-26 123.2 164 43.3
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 3.4e-26 122.5 188 39.9
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 5.8e-26 121.7 86 64.0
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 5.8e-26 121.7 183 42.1
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 9.9e-26 120.9 147 48.3
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 9.9e-26 120.9 150 47.3
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 1.3e-25 120.6 150 47.3
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 3.8e-25 119.0 151 47.0
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 3.8e-25 119.0 181 38.7
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 4.9e-25 118.6 138 49.3
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 6.4e-25 118.2 155 44.5
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 8.4e-25 117.9 148 48.0
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 1.1e-24 117.5 185 40.0
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.9e-24 116.7 136 48.5
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 3.2e-24 115.9 89 61.8
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.2e-24 115.9 207 36.7
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 3.2e-24 115.9 180 41.1
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 5.4e-24 115.2 181 39.8
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 7.1e-24 114.8 185 42.7
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 1.2e-23 114.0 139 45.3
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 6.0e-23 111.7 168 43.5
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 6.0e-23 111.7 84 63.1
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 7.8e-23 111.3 148 50.7
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 7.8e-23 111.3 136 44.1
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 1.0e-22 110.9 182 39.6
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 1.3e-22 110.5 84 60.7
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.3e-22 110.5 84 60.7
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 1.7e-22 110.2 84 59.5
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 1.7e-22 110.2 84 59.5
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.7e-22 110.2 152 45.4
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 2.3e-22 109.8 197 38.1
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 3.0e-22 109.4 204 38.7
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 3.9e-22 109.0 138 47.8
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 5.1e-22 108.6 137 43.8
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.1e-21 107.5 198 35.4
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.5e-21 107.1 121 48.8
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 1.9e-21 106.7 146 43.8
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 1.9e-21 106.7 149 41.6
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 1.9e-21 106.7 139 45.3
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 3.3e-21 105.9 87 60.9
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 3.3e-21 105.9 182 37.4
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 2.1e-20 103.2 139 43.9
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 2.1e-20 103.2 139 43.9
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 3.6e-20 102.4 141 44.7
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 4.8e-20 102.1 147 46.3
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 6.2e-20 101.7 139 44.6
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 6.2e-20 101.7 139 44.6
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 8.1e-20 101.3 139 43.2
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 1.8e-19 100.1 221 33.5
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 1.8e-19 100.1 198 35.9
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 2.4e-19 99.8 139 43.9
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 4.0e-19 99.0 139 46.0
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 4.0e-19 99.0 139 46.0
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 6.9e-19 98.2 139 43.9
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 2.0e-18 96.7 139 41.7
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 2.0e-18 96.7 139 41.7
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 4.5e-18 95.5 138 44.2
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 4.5e-18 95.5 139 42.4
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 4.5e-18 95.5 139 42.4
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 7.6e-18 94.7 95 49.5
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 1.7e-17 93.6 203 35.0
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 2.2e-17 93.2 87 54.0
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 3.8e-17 92.4 143 41.3
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 1.9e-16 90.1 138 42.8
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 1.3e-14 84.0 74 55.4
SEGI_17639 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 3.0e-14 82.8 187 35.3
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 3.3e-13 79.3 196 35.7
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 7.4e-13 78.2 136 38.2
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 2.8e-12 76.3 81 45.7
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.1e-11 74.3 89 46.1
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 1.2e-10 70.9 59 59.3
PSO782G3492 Papaver somniferum HOM05D004407 ORTHO05D005074 3.4e-10 69.3 144 38.2
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.3e-09 67.4 133 36.8
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 2.2e-09 66.6 84 44.0
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 3.8e-09 65.9 55 56.4
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 4.9e-09 65.5 143 35.0
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 8.4e-09 64.7 89 40.4
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 8.4e-09 64.7 92 35.9
Medtr4g061650 Medicago truncatula HOM05D004407 ORTHO05D005074 1.2e-07 60.8 53 56.6
CANSAT64G1789 Cannabis sativa HOM05D004407 ORTHO05D005074 3.9e-06 55.8 98 36.7


User provided reference genes

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