Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6996 Papaver somniferum HOM05D000246 ORTHO05D005907 2.8e-191 671.8 339 100.0
PSO675G5278 Papaver somniferum HOM05D000246 ORTHO05D005907 8.2e-191 670.2 339 99.7
Dinv22710 Davidia involucrata HOM05D000246 ORTHO05D005907 1.7e-175 619.4 339 91.4
GSVIVG01031659001 Vitis vinifera HOM05D000246 ORTHO05D005907 2.2e-175 619.0 339 91.2
TWI09G0257 Tripterygium wilfordii HOM05D000246 ORTHO05D005907 8.2e-175 617.1 339 91.4
Manes.01G119800 Manihot esculenta HOM05D000246 ORTHO05D005907 5.3e-174 614.4 338 89.6
Lj3C235G1 Lonicera japonica HOM05D000246 ORTHO05D005907 9.1e-174 613.6 339 90.0
Hma1.2p1_3184F.1_g333720 Hydrangea macrophylla HOM05D000246 ORTHO05D005907 1.2e-173 613.2 332 91.6
Eucgr.H00462 Eucalyptus grandis HOM05D000246 ORTHO05D005907 3.4e-173 611.7 339 88.5
Nitab4.5_0012487g0010 Nicotiana tabacum HOM05D000246 ORTHO05D005907 3.4e-173 611.7 340 90.3
Prupe.1G177100 Prunus persica HOM05D000246 ORTHO05D005907 3.4e-173 611.7 335 90.4
MBI07_g06132_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D005907 4.5e-173 611.3 339 90.0
TWI53G1869 Tripterygium wilfordii HOM05D000246 ORTHO05D005907 4.5e-173 611.3 339 90.0
Nn1g09763 Nelumbo nucifera HOM05D000246 ORTHO05D005907 7.7e-173 610.5 339 90.3
Peaxi162Scf00378g00062 Petunia axillaris HOM05D000246 ORTHO05D005907 7.7e-173 610.5 333 91.3
DCAR_004354 Daucus carota HOM05D000246 ORTHO05D005907 1.0e-172 610.1 335 89.6
Gorai.009G351400 Gossypium raimondii HOM05D000246 ORTHO05D005907 1.0e-172 610.1 339 89.7
CiPaw.01G109200 Carya illinoinensis HOM05D000246 ORTHO05D005907 1.3e-172 609.8 335 89.6
Gohir.D05G327500 Gossypium hirsutum HOM05D000246 ORTHO05D005907 1.3e-172 609.8 339 89.7
Sopen12g033430 Solanum pennellii HOM05D000246 ORTHO05D005907 2.2e-172 609.0 340 90.0
Cc03_g10680 Coffea canephora HOM05D000246 ORTHO05D005907 3.8e-172 608.2 332 90.1
Potri.014G147100 Populus trichocarpa HOM05D000246 ORTHO05D005907 3.8e-172 608.2 342 88.3
MD04G1027700 Malus domestica HOM05D000246 ORTHO05D005907 8.5e-172 607.1 335 89.9
Manes.02G078000 Manihot esculenta HOM05D000246 ORTHO05D005907 8.5e-172 607.1 332 89.8
RcHm_v2.0_Chr4g0410381 Rosa chinensis HOM05D000246 ORTHO05D005907 8.5e-172 607.1 339 89.4
Aqoxy2G04069 Aquilegia oxysepala HOM05D000246 ORTHO05D005907 1.1e-171 606.7 340 89.1
PGSC0003DMG400004583 Solanum tuberosum HOM05D000246 ORTHO05D005907 1.4e-171 606.3 333 90.7
Thecc.04G186400 Theobroma cacao HOM05D000246 ORTHO05D005907 1.4e-171 606.3 339 88.8
Glyma.02G097300 Glycine max HOM05D000246 ORTHO05D005907 7.2e-171 604.0 332 90.1
Cfa008706 Carpinus fangiana HOM05D000246 ORTHO05D005907 9.4e-171 603.6 339 88.2
Phvul.008G017300 Phaseolus vulgaris HOM05D000246 ORTHO05D005907 9.4e-171 603.6 332 89.8
EL10Ac3g07395 Beta vulgaris HOM05D000246 ORTHO05D005907 1.2e-170 603.2 339 87.6
Cpa.g.sc53.167 Carica papaya HOM05D000246 ORTHO05D005907 1.2e-170 603.2 339 88.8
Lalb_Chr10g0092081 Lupinus albus HOM05D000246 ORTHO05D005907 1.2e-170 603.2 337 88.1
VMungo1383G1353 Vigna mungo HOM05D000246 ORTHO05D005907 1.2e-170 603.2 332 89.5
CANSAT78G0915 Cannabis sativa HOM05D000246 ORTHO05D005907 1.6e-170 602.8 334 89.5
Glyma.18G284200 Glycine max HOM05D000246 ORTHO05D005907 1.6e-170 602.8 339 88.8
Migut.N00444 Erythranthe guttata HOM05D000246 ORTHO05D005907 2.1e-170 602.4 332 89.5
Haze_11715 Corylus avellana HOM05D000246 ORTHO05D005907 3.6e-170 601.7 339 87.9
Actinidia35924 Actinidia chinensis HOM05D000246 ORTHO05D005907 4.7e-170 601.3 334 88.9
Lj1g0023209 Lotus japonicus HOM05D000246 ORTHO05D005907 6.1e-170 600.9 332 89.2
Solyc09g098280.3 Solanum lycopersicum HOM05D000246 ORTHO05D005907 6.1e-170 600.9 340 89.1
PGSC0003DMG400021629 Solanum tuberosum HOM05D000246 ORTHO05D005907 6.1e-170 600.9 340 89.1
Lalb_Chr25g0284231 Lupinus albus HOM05D000246 ORTHO05D005907 7.9e-170 600.5 334 88.3
Nitab4.5_0000978g0210 Nicotiana tabacum HOM05D000246 ORTHO05D005907 7.9e-170 600.5 333 88.9
Nitab4.5_0006519g0040 Nicotiana tabacum HOM05D000246 ORTHO05D005907 7.9e-170 600.5 333 88.6
arahy.Tifrunner.gnm1.ann1.13067A Arachis hypogaea HOM05D000246 ORTHO05D005907 1.0e-169 600.1 339 87.9
arahy.Tifrunner.gnm1.ann1.N8MPD0 Arachis hypogaea HOM05D000246 ORTHO05D005907 1.0e-169 600.1 339 87.9
arahy.Tifrunner.gnm1.ann1.P7X33L Arachis hypogaea HOM05D000246 ORTHO05D005907 1.0e-169 600.1 339 87.9
Ca_07120_v3 Cicer arietinum L. HOM05D000246 ORTHO05D005907 1.0e-169 600.1 339 87.6
ClCG07G015740 Citrullus lanatus HOM05D000246 ORTHO05D005907 1.0e-169 600.1 339 88.2
PGR142G3194 Punica granatum HOM05D000246 ORTHO05D005907 1.4e-169 599.7 332 89.5
Sopen09g036210 Solanum pennellii HOM05D000246 ORTHO05D005907 1.4e-169 599.7 340 88.8
Psat3g188360 Pisum sativum HOM05D000246 ORTHO05D005907 2.3e-169 599.0 339 87.3
Potri.002G233500 Populus trichocarpa HOM05D000246 ORTHO05D005907 2.3e-169 599.0 341 87.4
Sc19g0007630 Simmondsia chinensis HOM05D000246 ORTHO05D005907 2.3e-169 599.0 333 88.3
CsaV3_4G003350 Cucumis sativus L. HOM05D000246 ORTHO05D005907 3.9e-169 598.2 339 87.6
Gorai.006G227100 Gossypium raimondii HOM05D000246 ORTHO05D005907 3.9e-169 598.2 339 87.0
Gohir.D09G203200 Gossypium hirsutum HOM05D000246 ORTHO05D005907 8.8e-169 597.0 339 86.7
Gohir.A09G209800 Gossypium hirsutum HOM05D000246 ORTHO05D005907 1.5e-168 596.3 339 86.7
Sed0019749 Sechium edule HOM05D000246 ORTHO05D005907 3.3e-168 595.1 339 87.3
Lsat_1_v5_gn_6_71461 Lactuca sativa HOM05D000246 ORTHO05D005907 7.4e-168 594.0 338 88.2
Sed0019335 Sechium edule HOM05D000246 ORTHO05D005907 9.7e-168 593.6 339 87.0
Medtr7g021870 Medicago truncatula HOM05D000246 ORTHO05D005907 1.7e-167 592.8 337 86.6
Hund24461 Selenicereus undatus HOM05D000246 ORTHO05D005907 1.7e-167 592.8 340 86.5
MSTRG.21977 Avicennia marina HOM05D000246 ORTHO05D005907 2.2e-167 592.4 332 87.7
Lsat_1_v5_gn_6_32061 Lactuca sativa HOM05D000246 ORTHO05D005907 2.2e-167 592.4 331 89.1
AUR62020934 Chenopodium quinoa HOM05D000246 ORTHO05D005907 1.8e-166 589.3 342 86.0
FAN17G0846 Fragaria x ananassa HOM05D000246 ORTHO05D005907 3.1e-166 588.6 341 86.5
Lj3C238T3 Lonicera japonica HOM05D000246 ORTHO05D005907 5.3e-166 587.8 325 89.5
unitig_578.g16351 Utricularia gibba HOM05D000246 ORTHO05D005907 6.9e-166 587.4 339 85.5
FvH4_4g12310 Fragaria vesca HOM05D000246 ORTHO05D005907 9.1e-166 587.0 341 86.2
FAN12G0598 Fragaria x ananassa HOM05D000246 ORTHO05D005907 9.1e-166 587.0 341 86.2
DCAR_001263 Daucus carota HOM05D000246 ORTHO05D005907 1.5e-165 586.3 332 87.7
CDE05G2302 Ceratophyllum demersum HOM05D000246 ORTHO05D005907 2.0e-165 585.9 339 83.8
Rhsim09G0037600 Rhododendron simsii HOM05D000246 ORTHO05D005907 3.4e-165 585.1 354 83.6
Ciclev10005378m.g Citrus clementina HOM05D000246 ORTHO05D005907 5.9e-165 584.3 339 85.0
HanXRQChr10g0290061 Helianthus annuus HOM05D000246 ORTHO05D005907 5.9e-165 584.3 333 87.4
FAN22G2422 Fragaria x ananassa HOM05D000246 ORTHO05D005907 1.0e-164 583.6 342 85.7
FAN07G2572 Fragaria x ananassa HOM05D000246 ORTHO05D005907 1.7e-164 582.8 341 85.6
HPP92_006214 Vanilla planifolia HOM05D000246 ORTHO05D005907 3.8e-164 581.6 339 85.8
SalBow6G1195 Salvia bowleyana HOM05D000246 ORTHO05D005907 1.4e-163 579.7 374 79.1
THA.LOC104819306 Tarenaya hassleriana HOM05D000246 ORTHO05D005907 1.9e-163 579.3 334 85.9
Sabra14G0110400 Salix brachista HOM05D000246 ORTHO05D005907 2.3e-161 572.4 332 85.5
CAN.G710.44 Capsicum annuum HOM05D000246 ORTHO05D005907 5.2e-161 571.2 309 90.6
Os04g0376500 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D005907 6.7e-161 570.9 348 82.5
QL06p027657 Quercus lobata HOM05D000246 ORTHO05D005907 8.8e-161 570.5 315 88.9
THA.LOC104809592 Tarenaya hassleriana HOM05D000246 ORTHO05D005907 1.5e-160 569.7 334 84.4
Sp1g09540 Schrenkiella parvula HOM05D000246 ORTHO05D005907 5.7e-160 567.8 335 84.5
SGA_v2.0_scaffold178G39529 Striga asiatica HOM05D000246 ORTHO05D005907 7.4e-160 567.4 309 89.6
Thhalv10008134m.g Eutrema salsugineum HOM05D000246 ORTHO05D005907 1.3e-159 566.6 335 84.2
Aa31LG1G4010 Aethionema arabicum HOM05D000246 ORTHO05D005907 1.7e-159 566.2 335 84.2
CDE05G0298 Ceratophyllum demersum HOM05D000246 ORTHO05D005907 2.2e-159 565.8 339 81.1
Dinv44209 Davidia involucrata HOM05D000246 ORTHO05D005907 2.2e-159 565.8 339 85.5
A08p33760 Brassica napus HOM05D000246 ORTHO05D005907 4.8e-159 564.7 335 83.3
Atru.chr3.1829 Acer truncatum HOM05D000246 ORTHO05D005907 6.3e-159 564.3 320 87.5
C05p09210 Brassica napus HOM05D000246 ORTHO05D005907 8.2e-159 563.9 335 83.3
BraA08t35292Z Brassica rapa HOM05D000246 ORTHO05D005907 1.1e-158 563.5 333 84.1
BraA09t41822Z Brassica rapa HOM05D000246 ORTHO05D005907 1.1e-158 563.5 333 84.1
Carub.0001s1038 Capsella rubella HOM05D000246 ORTHO05D005907 1.1e-158 563.5 333 84.1
ATR1147G030 Amborella trichopoda HOM05D000246 ORTHO05D005907 2.4e-158 562.4 320 86.9
AL1G21780 Arabidopsis lyrata HOM05D000246 ORTHO05D005907 2.4e-158 562.4 335 83.6
BcaC05g24965 Brassica carinata HOM05D000246 ORTHO05D005907 2.4e-158 562.4 335 83.3
BcaC07g38630 Brassica carinata HOM05D000246 ORTHO05D005396 2.4e-158 562.4 340 82.1
A06p07620 Brassica napus HOM05D000246 ORTHO05D005907 2.4e-158 562.4 333 83.8
BolC8t52387H Brassica oleracea HOM05D000246 ORTHO05D005907 2.4e-158 562.4 333 83.8
BraA06t23964Z Brassica rapa HOM05D000246 ORTHO05D005907 2.4e-158 562.4 333 83.8
C08p48480 Brassica napus HOM05D000246 ORTHO05D005907 3.1e-158 562.0 333 83.8
Zm00001eb420800 Zea mays HOM05D000246 ORTHO05D005907 4.1e-158 561.6 343 82.5
AT1G10840 Arabidopsis thaliana HOM05D000246 ORTHO05D005907 5.3e-158 561.2 335 83.3
BcaC07g38591 Brassica carinata HOM05D000246 ORTHO05D005907 2.6e-157 558.9 335 83.0
FAN12G1501 Fragaria x ananassa HOM05D000246 ORTHO05D005907 4.5e-157 558.1 322 86.3
BcaNung06200 Brassica carinata HOM05D000246 ORTHO05D005907 5.9e-157 557.8 327 83.8
BolC8t49032H Brassica oleracea HOM05D000246 ORTHO05D005907 5.9e-157 557.8 333 83.2
CARHR011060 Cardamine hirsuta HOM05D000246 ORTHO05D005907 1.1e-155 553.5 335 82.7
Nitab4.5_0001526g0070 Nicotiana tabacum HOM05D000246 ORTHO05D005907 1.1e-155 553.5 340 83.8
A09p64720 Brassica napus HOM05D000246 ORTHO05D005907 2.5e-155 552.4 348 80.2
SMO201G0006 Selaginella moellendorffii HOM05D000246 ORTHO05D005907 6.1e-154 547.7 340 77.4
Mapoly0149s0014 Marchantia polymorpha HOM05D000246 ORTHO05D005907 5.2e-153 544.7 335 77.3
Duzib268G0303 Durio zibethinus HOM05D000246 ORTHO05D005907 2.6e-152 542.3 339 82.0
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 2.4e-150 535.8 314 84.1
SEGI_02915 Sequoiadendron giganteum HOM05D000246 ORTHO05D005907 4.1e-150 535.0 335 77.9
Pp3c6_17230 Physcomitrium patens HOM05D000246 ORTHO05D005907 1.2e-149 533.5 339 75.8
Pp3c25_2440 Physcomitrium patens HOM05D000246 ORTHO05D005907 3.5e-149 531.9 339 76.1
Oeu034474.1 Olea europaea HOM05D000246 ORTHO05D005907 1.0e-148 530.4 375 74.4
vmacro00560 Vaccinium macrocarpon HOM05D000246 ORTHO05D005907 3.8e-148 528.5 417 68.6
Nn7g38282 Nelumbo nucifera HOM05D000246 ORTHO05D005907 2.0e-141 506.1 339 79.6
C08p13990 Brassica napus HOM05D000246 ORTHO05D005907 2.3e-140 502.7 359 73.5
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 3.3e-139 498.8 295 83.1
TAR365G1195 Trochodendron aralioides HOM05D000246 ORTHO05D005907 1.2e-138 496.9 264 93.2
CSS0028322 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D005907 1.6e-138 496.5 271 90.4
Hma1.2p1_1025F.1_g249250 Hydrangea macrophylla HOM05D000246 ORTHO05D005907 3.0e-137 492.3 264 92.8
Hma1.2p1_3184F.1_g333715 Hydrangea macrophylla HOM05D000246 ORTHO05D005907 3.0e-137 492.3 264 92.8
CBR_g23450 Chara braunii HOM05D000246 ORTHO05D005907 1.1e-134 483.8 321 72.9
COL.COLO4_08082 Corchorus olitorius HOM05D000246 ORTHO05D005907 2.3e-129 466.1 332 73.8
Duzib151G0358 Durio zibethinus HOM05D000246 ORTHO05D005907 4.4e-128 461.8 339 72.9
Ciclev10033395m.g Citrus clementina HOM05D000246 ORTHO05D005907 1.5e-120 436.8 344 65.7
ECA238G0367 Erigeron canadensis HOM05D000246 ORTHO05D005907 9.8e-120 434.1 238 89.1
Zm00001eb420740 Zea mays HOM05D000246 ORTHO05D005907 7.0e-118 427.9 251 83.7
PRCOL_00002009 Prasinoderma coloniale HOM05D000246 ORTHO05D005907 1.4e-113 413.7 330 60.9
AUR62018486 Chenopodium quinoa HOM05D000246 ORTHO05D005907 6.4e-111 404.8 251 80.1
AagrBONN_evm.TU.Sc2ySwM_344.209 Anthoceros agrestis HOM05D000246 ORTHO05D005907 9.2e-110 401.0 248 78.6
MELO3C017707.2 Cucumis melo HOM05D000246 ORTHO05D005907 2.4e-105 386.3 216 87.5
Cre16.g676314 Chlamydomonas reinhardtii HOM05D000246 ORTHO05D005907 2.7e-101 372.9 330 55.5
MCO05G711 Micromonas commoda HOM05D000246 ORTHO05D005907 3.5e-101 372.5 334 58.1
SHI25257 Sapria himalayana HOM05D000246 ORTHO05D005907 3.6e-53 213.0 129 81.4
Pp3c25_2670 Physcomitrium patens HOM05D000246 ORTHO05D005907 3.9e-44 183.0 169 59.2
PSO675G6425 Papaver somniferum HOM05D000246 ORTHO05D005907 3.3e-35 153.3 79 94.9
Actinidia32962 Actinidia chinensis HOM05D000246 ORTHO05D052905 3.7e-34 149.8 182 52.2
Dinv10886 Davidia involucrata HOM05D000246 ORTHO05D005907 4.4e-27 126.3 73 80.8
AagrBONN_evm.TU.Sc2ySwM_362.466 Anthoceros agrestis HOM05D000246 ORTHO05D075151 3.1e-25 120.2 74 77.0
Dinv10847 Davidia involucrata HOM05D000246 ORTHO05D005907 3.1e-25 120.2 72 79.2
COL.COLO4_30406 Corchorus olitorius HOM05D000246 ORTHO05D005907 7.5e-19 99.0 103 54.4
FAN20G1849 Fragaria x ananassa HOM05D000246 ORTHO05D209582 6.6e-15 85.9 51 82.4
Medtr7g064210 Medicago truncatula HOM05D000076 ORTHO05D036729 4.7e-13 79.7 99 48.5
VMungo0331G1529 Vigna mungo HOM05D000246 ORTHO05D436255 3.4e-11 73.6 41 78.0
Medtr2g022940 Medicago truncatula HOM05D000871 ORTHO05D036729 5.8e-11 72.8 57 68.4
AagrBONN_evm.TU.Sc2ySwM_362.465 Anthoceros agrestis HOM05D000246 ORTHO05D076687 8.3e-10 68.9 100 44.0
HanXRQChr07g0191211 Helianthus annuus HOM05D000246 ORTHO05D224049 1.6e-08 64.7 60 60.0
HanXRQChr10g0296701 Helianthus annuus HOM05D000246 ORTHO05D221073 1.6e-08 64.7 60 60.0
MELO3C032112.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.9e-06 57.8 125 35.2


User provided reference genes

Program Settings