Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 0.0e+00 1562.0 772 100.0
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 9.6e-147 525.0 873 42.8
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 2.1e-141 507.3 961 40.0
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 3.8e-135 486.5 955 39.4
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 4.7e-117 426.4 759 41.0
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 4.0e-116 423.3 803 41.8
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 4.8e-114 416.4 845 39.5
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 3.1e-113 413.7 792 40.9
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.0e-112 411.0 837 39.8
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 2.7e-112 410.6 792 40.5
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 3.5e-112 410.2 914 38.2
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 5.9e-112 409.5 741 41.3
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 1.3e-111 408.3 973 35.7
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 9.4e-110 402.1 857 37.6
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 6.1e-109 399.4 819 39.4
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 5.7e-107 392.9 777 39.1
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 2.8e-106 390.6 844 36.8
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 4.1e-105 386.7 745 39.6
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 5.4e-105 386.3 739 39.0
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 2.0e-104 384.4 302 66.6
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 2.7e-104 384.0 463 50.3
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 1.7e-103 381.3 320 63.8
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 8.5e-103 379.0 785 39.4
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 8.5e-103 379.0 785 38.2
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 3.2e-102 377.1 362 58.3
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 4.2e-102 376.7 836 36.6
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 1.2e-101 375.2 327 61.2
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 1.2e-101 375.2 850 38.5
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 1.6e-101 374.8 828 37.6
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 6.1e-101 372.9 743 38.4
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 1.8e-100 371.3 368 57.6
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 2.3e-100 370.9 410 52.9
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 2.3e-100 370.9 293 64.2
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 4.0e-100 370.2 395 53.7
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 5.2e-100 369.8 395 54.9
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 8.8e-100 369.0 358 57.8
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 1.5e-99 368.2 812 36.6
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 2.0e-99 367.9 758 39.1
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 3.4e-99 367.1 293 63.8
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 5.7e-99 366.3 383 55.9
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 9.8e-99 365.5 651 41.6
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 1.3e-98 365.2 789 38.7
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 1.7e-98 364.8 294 65.3
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 2.2e-98 364.4 378 56.3
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 6.3e-98 362.8 286 64.3
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 1.8e-97 361.3 417 52.8
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 1.8e-97 361.3 293 64.5
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.8e-97 361.3 734 36.5
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 5.4e-97 359.8 741 36.6
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 5.4e-97 359.8 878 36.4
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 1.6e-96 358.2 517 46.4
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 1.6e-96 358.2 370 54.3
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 1.6e-96 358.2 291 63.6
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 2.0e-96 357.8 792 39.4
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 4.5e-96 356.7 383 53.5
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 1.0e-95 355.5 395 54.7
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 2.3e-95 354.4 517 45.8
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 2.9e-95 354.0 740 37.7
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 5.0e-95 353.2 347 56.5
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 5.0e-95 353.2 257 70.0
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 1.5e-94 351.7 783 36.3
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 1.9e-94 351.3 359 53.5
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 3.3e-94 350.5 771 36.3
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 1.2e-93 348.6 237 71.3
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 1.6e-93 348.2 347 56.2
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 2.1e-93 347.8 284 65.1
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 1.0e-92 345.5 279 62.0
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 1.4e-92 345.1 347 56.2
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 1.8e-92 344.7 748 35.8
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 1.8e-92 344.7 315 57.1
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 2.3e-92 344.4 805 36.6
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 3.0e-92 344.0 780 37.7
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 4.0e-92 343.6 897 35.3
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 4.0e-92 343.6 349 54.2
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 5.2e-92 343.2 322 58.1
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 5.2e-92 343.2 774 36.6
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 5.2e-92 343.2 323 57.3
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 2.0e-91 341.3 328 55.8
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 9.8e-91 339.0 281 61.9
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 1.3e-90 338.6 348 57.2
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 2.9e-90 337.4 307 57.3
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 2.9e-90 337.4 749 39.0
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 6.4e-90 336.3 308 57.5
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 8.3e-90 335.9 296 61.5
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 7.0e-89 332.8 809 34.0
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 9.2e-89 332.4 775 35.5
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 1.2e-88 332.0 313 57.5
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 1.2e-88 332.0 287 60.3
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 2.0e-88 331.3 397 49.9
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 5.0e-87 326.6 845 36.3
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 4.3e-86 323.6 288 58.7
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 2.8e-85 320.9 381 49.1
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 1.8e-84 318.2 335 52.5
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 6.8e-84 316.2 507 42.4
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 9.8e-83 312.4 786 34.4
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 2.2e-82 311.2 793 36.1
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.6e-80 305.1 737 34.6
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 4.6e-80 303.5 282 59.2
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 3.3e-78 297.4 241 64.3
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 9.5e-78 295.8 344 50.3
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 4.0e-76 290.4 542 40.6
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 2.7e-72 277.7 699 35.6
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 4.7e-69 266.9 258 54.3
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 9.9e-51 206.1 252 49.6
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 8.4e-42 176.4 793 26.7
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 9.3e-41 172.9 201 43.3
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 6.0e-40 170.2 612 32.8
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.3e-34 152.5 168 50.6
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 6.5e-26 123.6 115 55.7


User provided reference genes

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