Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 1.6e-80 302.8 162 100.0
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 1.9e-73 279.3 162 93.2
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 1.5e-17 93.6 156 36.5
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.6e-17 92.8 162 35.2
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 2.2e-16 89.7 162 37.0
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 2.8e-16 89.4 134 39.6
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 3.7e-16 89.0 163 35.6
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 6.3e-16 88.2 163 35.6
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 6.3e-16 88.2 163 34.4
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 1.1e-15 87.4 163 33.7
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 1.4e-15 87.0 163 37.4
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 5.4e-15 85.1 131 42.0
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 7.0e-15 84.7 130 40.8
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 7.0e-15 84.7 163 34.4
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.6e-14 83.6 161 34.2
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 1.6e-14 83.6 127 42.5
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 1.6e-14 83.6 164 36.6
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.0e-14 83.2 132 40.9
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 3.5e-14 82.4 129 38.8
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 4.5e-14 82.0 133 39.1
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 2.2e-13 79.7 157 38.9
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 2.9e-13 79.3 136 37.5
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 2.9e-13 79.3 124 44.4
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 2.9e-13 79.3 162 37.7
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 3.8e-13 79.0 130 38.5
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 5.0e-13 78.6 128 40.6
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 5.0e-13 78.6 166 34.3
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 8.5e-13 77.8 94 44.7
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 1.1e-12 77.4 132 37.1
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.1e-12 77.4 130 41.5
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.5e-12 77.0 163 38.0
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.9e-12 76.6 130 42.3
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 3.2e-12 75.9 128 37.5
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 3.2e-12 75.9 127 40.2
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 3.2e-12 75.9 163 33.1
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 4.2e-12 75.5 131 37.4
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 4.2e-12 75.5 129 38.8
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 7.2e-12 74.7 120 45.8
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 7.2e-12 74.7 132 39.4
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 9.5e-12 74.3 128 38.3
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.6e-11 73.6 132 41.7
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 2.1e-11 73.2 131 39.7
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 2.1e-11 73.2 130 38.5
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 2.7e-11 72.8 131 38.9
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 2.7e-11 72.8 152 32.9
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 3.6e-11 72.4 131 40.5
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 6.1e-11 71.6 130 36.9
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 1.0e-10 70.9 131 37.4
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.4e-10 70.5 141 36.2
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 1.8e-10 70.1 134 37.3
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 1.8e-10 70.1 122 37.7
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 2.3e-10 69.7 79 45.6
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 3.0e-10 69.3 134 34.3
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 4.0e-10 68.9 75 50.7
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 8.8e-10 67.8 98 39.8
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.2e-09 67.4 143 35.0
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 1.2e-09 67.4 167 31.7
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 1.5e-09 67.0 69 50.7
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 1.5e-09 67.0 69 50.7
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 2.6e-09 66.2 63 55.6
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 3.4e-09 65.9 69 49.3
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 4.4e-09 65.5 63 55.6
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 4.4e-09 65.5 73 49.3
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 5.7e-09 65.1 80 45.0
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 5.7e-09 65.1 112 39.3
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 9.8e-09 64.3 93 38.7
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 1.3e-08 63.9 63 55.6
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 1.7e-08 63.5 69 49.3
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 1.7e-08 63.5 69 49.3
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 1.7e-08 63.5 69 49.3
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 2.8e-08 62.8 63 54.0
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 4.9e-08 62.0 122 33.6
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 6.3e-08 61.6 113 37.2
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 8.3e-08 61.2 101 37.6
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 8.3e-08 61.2 139 33.1
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 8.3e-08 61.2 128 35.2
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.1e-07 60.8 104 34.6
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 1.4e-07 60.5 37 70.3
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 1.4e-07 60.5 164 34.1
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 2.4e-07 59.7 44 63.6
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 4.1e-07 58.9 105 35.2
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 5.4e-07 58.5 41 65.9
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 7.0e-07 58.2 122 33.6
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 1.2e-06 57.4 161 29.2
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 1.2e-06 57.4 122 31.1
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 1.6e-06 57.0 123 32.5
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.0e-06 56.6 136 30.9
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.0e-06 56.6 133 30.8
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 2.0e-06 56.6 37 64.9
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 2.7e-06 56.2 117 34.2
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 3.5e-06 55.8 107 36.4
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 7.7e-06 54.7 145 30.3
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 7.7e-06 54.7 64 45.3
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 7.7e-06 54.7 45 55.6


User provided reference genes

Program Settings