Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 2.5e-56 221.9 110 100.0
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 6.1e-55 217.2 110 97.3
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 4.9e-36 154.5 108 67.6
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 6.4e-36 154.1 108 66.7
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.9e-35 152.5 108 64.8
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 1.9e-35 152.5 108 64.8
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.4e-35 152.1 108 64.8
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 3.2e-35 151.8 108 65.7
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 9.2e-35 150.2 109 63.3
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.2e-34 149.8 108 64.8
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.2e-34 149.8 109 64.2
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 7.8e-34 147.1 108 63.0
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 7.8e-34 147.1 108 63.0
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 1.3e-33 146.4 108 63.0
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.7e-33 146.0 108 65.7
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 1.7e-33 146.0 108 65.7
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 1.7e-33 146.0 108 65.7
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 2.3e-33 145.6 108 62.0
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 3.9e-33 144.8 107 65.4
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 3.9e-33 144.8 108 64.8
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 6.6e-33 144.1 108 65.7
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 8.6e-33 143.7 108 62.0
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 3.3e-32 141.7 108 63.9
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 4.3e-32 141.4 110 63.6
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 4.3e-32 141.4 108 63.0
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 5.6e-32 141.0 108 58.3
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 9.5e-32 140.2 110 62.7
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 9.5e-32 140.2 108 58.3
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 1.6e-31 139.4 108 62.0
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.6e-31 139.4 108 58.3
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 2.1e-31 139.0 107 63.6
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 2.1e-31 139.0 108 61.1
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 2.8e-31 138.7 108 62.0
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 3.6e-31 138.3 108 57.4
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 4.7e-31 137.9 108 57.4
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 4.7e-31 137.9 108 57.4
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 6.2e-31 137.5 109 57.8
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 1.1e-30 136.7 108 63.0
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 1.4e-30 136.3 108 55.6
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 4.0e-30 134.8 108 58.3
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 5.2e-30 134.4 108 55.6
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 6.8e-30 134.0 99 63.6
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 6.8e-30 134.0 107 61.7
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 8.9e-30 133.7 107 58.9
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 1.2e-29 133.3 106 62.3
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 2.0e-29 132.5 107 58.9
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.4e-29 131.3 108 59.3
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.4e-29 131.3 108 59.3
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 4.4e-29 131.3 108 54.6
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 9.9e-29 130.2 105 57.1
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 9.9e-29 130.2 108 55.6
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 9.9e-29 130.2 107 59.8
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 1.7e-28 129.4 108 60.2
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 2.2e-28 129.0 108 57.4
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 2.9e-28 128.6 108 61.1
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 3.7e-28 128.3 108 55.6
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 4.9e-28 127.9 109 56.0
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 1.4e-27 126.3 107 54.2
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 1.4e-27 126.3 107 54.2
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 4.1e-27 124.8 108 49.1
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 5.4e-27 124.4 108 54.6
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.2e-26 123.2 109 54.1
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 2.1e-26 122.5 107 55.1
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 2.1e-26 122.5 109 56.9
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 4.6e-26 121.3 107 57.9
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.3e-25 119.8 107 52.3
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 1.3e-25 119.8 108 54.6
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 1.3e-25 119.8 111 54.1
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.7e-25 119.4 107 56.1
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 2.3e-25 119.0 108 52.8
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 2.3e-25 119.0 107 56.1
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 2.3e-25 119.0 108 59.3
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 3.9e-25 118.2 87 65.5
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 6.6e-25 117.5 108 58.3
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 3.3e-24 115.2 108 53.7
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 3.3e-24 115.2 108 53.7
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 7.3e-24 114.0 99 58.6
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 9.5e-24 113.6 107 57.9
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 1.2e-23 113.2 69 78.3
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 2.4e-22 109.0 108 52.8
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 3.1e-22 108.6 108 50.9
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 4.0e-22 108.2 108 54.6
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 6.8e-22 107.5 118 47.5
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 1.2e-21 106.7 105 51.4
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 1.5e-21 106.3 100 54.0
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 2.6e-21 105.5 109 53.2
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 2.6e-21 105.5 107 49.5
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 1.7e-20 102.8 108 49.1
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 1.7e-20 102.8 108 49.1
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 1.7e-20 102.8 108 49.1
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 1.7e-20 102.8 108 49.1
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 3.8e-20 101.7 108 48.1
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 6.4e-20 100.9 108 49.1
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 8.4e-20 100.5 108 47.2
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 9.2e-19 97.1 67 68.7
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.6e-18 96.3 67 68.7
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 2.7e-18 95.5 96 49.0
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.7e-17 92.8 58 75.9
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 2.3e-17 92.4 69 62.3
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 3.0e-17 92.0 107 44.9
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 9.0e-14 80.5 108 43.5
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 3.2e-11 72.0 106 34.9
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 2.3e-09 65.9 40 80.0
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 1.1e-06 57.0 51 60.8


User provided reference genes

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