Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 1.0e-125 453.4 222 100.0
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 1.4e-114 416.4 209 99.0
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 1.3e-88 330.1 168 97.6
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 8.5e-88 327.4 168 95.8
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 1.4e-87 326.6 168 95.8
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 2.5e-87 325.9 168 95.8
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 5.5e-87 324.7 168 95.2
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 7.2e-87 324.3 168 95.2
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 9.4e-87 323.9 168 94.6
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 9.4e-87 323.9 168 94.6
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 1.2e-86 323.6 168 94.0
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 1.6e-86 323.2 168 94.0
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 2.1e-86 322.8 168 94.0
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 2.1e-86 322.8 168 94.6
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 2.1e-86 322.8 169 93.5
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 2.7e-86 322.4 168 94.6
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 2.7e-86 322.4 168 92.9
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 2.7e-86 322.4 169 93.5
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 2.7e-86 322.4 168 94.0
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 3.6e-86 322.0 168 93.5
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 4.7e-86 321.6 168 92.9
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 4.7e-86 321.6 168 92.9
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 6.1e-86 321.2 168 93.5
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 6.1e-86 321.2 168 94.0
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 6.1e-86 321.2 168 94.0
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 6.1e-86 321.2 168 94.0
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 6.1e-86 321.2 168 94.6
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 6.1e-86 321.2 168 93.5
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 6.1e-86 321.2 170 91.8
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 7.9e-86 320.9 168 93.5
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 7.9e-86 320.9 168 92.9
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 1.0e-85 320.5 168 94.0
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 1.0e-85 320.5 168 94.0
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 1.0e-85 320.5 168 94.0
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 1.8e-85 319.7 168 92.3
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 1.8e-85 319.7 168 92.9
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 1.8e-85 319.7 168 92.3
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 1.8e-85 319.7 168 91.7
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 1.8e-85 319.7 168 91.7
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 1.8e-85 319.7 170 92.9
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 2.3e-85 319.3 168 94.0
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 2.3e-85 319.3 168 92.9
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 2.3e-85 319.3 168 93.5
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 2.3e-85 319.3 168 94.0
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 3.0e-85 318.9 168 92.9
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 3.0e-85 318.9 168 93.5
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 3.0e-85 318.9 168 92.9
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 3.0e-85 318.9 168 92.3
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.0e-85 318.9 168 93.5
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 3.9e-85 318.5 168 93.5
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 3.9e-85 318.5 168 93.5
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 3.9e-85 318.5 168 93.5
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 5.1e-85 318.2 168 92.9
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 5.1e-85 318.2 168 92.9
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 6.7e-85 317.8 168 92.9
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 8.8e-85 317.4 169 91.7
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 8.8e-85 317.4 168 92.9
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 8.8e-85 317.4 168 92.3
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 8.8e-85 317.4 168 92.3
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 1.1e-84 317.0 168 93.5
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 1.1e-84 317.0 168 93.5
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 1.1e-84 317.0 170 91.8
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 1.1e-84 317.0 168 91.7
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 1.5e-84 316.6 168 94.0
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 2.0e-84 316.2 179 89.4
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 2.6e-84 315.8 168 89.9
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 2.6e-84 315.8 168 92.9
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 2.6e-84 315.8 168 92.3
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 2.6e-84 315.8 180 87.8
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 3.3e-84 315.5 168 91.7
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 3.3e-84 315.5 168 93.5
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 4.4e-84 315.1 170 91.8
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 4.4e-84 315.1 168 92.3
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 5.7e-84 314.7 168 90.5
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 5.7e-84 314.7 165 95.2
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 7.4e-84 314.3 168 91.7
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 7.4e-84 314.3 168 91.1
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 7.4e-84 314.3 168 91.1
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 7.4e-84 314.3 168 91.1
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 7.4e-84 314.3 168 91.1
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 7.4e-84 314.3 168 92.3
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 7.4e-84 314.3 168 91.1
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 1.3e-83 313.5 168 91.7
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 1.7e-83 313.2 168 91.1
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 1.7e-83 313.2 168 91.1
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 1.7e-83 313.2 168 91.1
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 2.8e-83 312.4 168 91.1
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 3.7e-83 312.0 168 90.5
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 3.7e-83 312.0 168 91.1
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 3.7e-83 312.0 168 89.9
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 3.7e-83 312.0 168 91.1
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 3.7e-83 312.0 168 91.1
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 4.8e-83 311.6 168 89.9
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 4.8e-83 311.6 170 91.8
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 4.8e-83 311.6 168 89.3
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 6.3e-83 311.2 168 90.5
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 1.1e-82 310.5 170 91.2
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 1.1e-82 310.5 168 89.9
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 3.1e-82 308.9 168 91.1
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 2.1e-78 296.2 168 86.3
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 2.3e-77 292.7 174 85.1
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 6.7e-77 291.2 170 81.8
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 1.1e-76 290.4 168 85.7
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 3.3e-76 288.9 168 84.5
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 3.3e-76 288.9 232 68.1
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 1.3e-75 287.0 162 86.4
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 5.9e-73 278.1 144 95.8
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 4.7e-70 268.5 143 93.0
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 8.3e-67 257.7 167 76.0
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 1.8e-66 256.5 142 88.7
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 5.9e-65 251.5 150 85.3
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.7e-64 250.0 144 87.5
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 6.5e-64 248.1 152 83.6
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.1e-63 247.3 144 86.8
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.5e-63 246.9 144 84.7
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 9.5e-63 244.2 153 79.7
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 1.0e-61 240.7 166 71.7
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 8.8e-61 237.7 138 88.4
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.4e-58 230.3 181 68.5
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 4.1e-58 228.8 142 79.6
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 2.0e-52 209.9 138 76.8
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 4.3e-47 192.2 144 70.8
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 7.8e-41 171.4 161 55.3
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 7.3e-39 164.9 164 56.7
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 3.4e-36 156.0 83 92.8
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 5.1e-32 142.1 76 92.1
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 2.8e-30 136.3 69 95.7
MSTRG.14769 Avicennia marina HOM05D005716 ORTHO05D007885 4.0e-29 132.5 73 86.3
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 8.9e-29 131.3 67 97.0
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 4.6e-25 119.0 109 60.6
CAN.G94.3 Capsicum annuum HOM05D005716 ORTHO05D115662 1.5e-23 114.0 93 63.4
VMungo1309G0118 Vigna mungo HOM05D005716 ORTHO05D437644 5.1e-16 89.0 52 84.6
A04p26400 Brassica napus HOM05D005716 ORTHO05D099386 1.4e-13 80.9 43 81.4


User provided reference genes

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