Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 9.1e-70 266.9 149 100.0
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 5.9e-69 264.2 149 99.3
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 1.0e-52 210.3 150 78.7
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 1.0e-52 210.3 149 78.5
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.7e-52 209.5 144 81.2
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 2.3e-52 209.1 146 79.5
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.3e-52 209.1 146 79.5
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 5.0e-52 208.0 150 77.3
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 5.0e-52 208.0 145 79.3
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 1.1e-51 206.8 144 79.2
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 1.1e-51 206.8 144 79.2
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.5e-51 206.5 143 79.7
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 1.9e-51 206.1 144 79.9
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 2.5e-51 205.7 146 80.8
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.5e-51 205.7 146 80.8
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.5e-51 205.7 143 79.7
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 3.3e-51 205.3 142 78.9
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 4.3e-51 204.9 150 77.3
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 5.6e-51 204.5 147 75.5
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.6e-51 204.5 146 80.1
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 5.6e-51 204.5 147 79.6
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 7.3e-51 204.1 143 77.6
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 9.5e-51 203.8 144 79.9
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 9.5e-51 203.8 142 78.9
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 1.2e-50 203.4 147 75.5
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.2e-50 203.4 142 79.6
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.6e-50 203.0 146 79.5
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.6e-50 203.0 146 79.5
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 2.1e-50 202.6 144 75.0
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 2.1e-50 202.6 143 77.6
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 2.8e-50 202.2 145 76.6
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.6e-50 201.8 146 79.5
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 3.6e-50 201.8 142 78.2
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 3.6e-50 201.8 143 77.6
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 6.2e-50 201.1 142 77.5
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 8.0e-50 200.7 142 76.8
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.1e-49 200.3 149 73.2
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 1.4e-49 199.9 144 75.7
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 2.3e-49 199.1 144 75.7
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 3.1e-49 198.7 146 74.0
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 5.2e-49 198.0 143 75.5
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 5.2e-49 198.0 141 76.6
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 8.9e-49 197.2 143 76.2
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 8.9e-49 197.2 160 71.9
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 8.9e-49 197.2 142 74.6
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 8.9e-49 197.2 143 75.5
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 8.9e-49 197.2 146 74.0
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 1.2e-48 196.8 151 76.2
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.2e-48 196.8 143 76.9
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 2.0e-48 196.1 148 70.9
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 2.0e-48 196.1 143 75.5
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 3.4e-48 195.3 144 73.6
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 3.4e-48 195.3 144 73.6
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 4.4e-48 194.9 144 75.0
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 9.8e-48 193.7 143 73.4
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 1.3e-47 193.4 144 73.6
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 2.9e-47 192.2 142 74.6
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 3.7e-47 191.8 144 72.2
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 3.7e-47 191.8 146 71.9
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 3.7e-47 191.8 147 71.4
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 6.4e-47 191.0 144 72.9
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 6.4e-47 191.0 146 71.9
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 1.4e-46 189.9 148 71.6
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 2.4e-46 189.1 141 71.6
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 2.4e-46 189.1 148 70.3
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 2.4e-46 189.1 148 70.3
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 3.2e-46 188.7 145 69.7
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 3.2e-46 188.7 127 81.9
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 7.0e-46 187.6 148 70.3
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 7.0e-46 187.6 148 69.6
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 7.0e-46 187.6 148 70.3
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 7.0e-46 187.6 146 70.5
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 9.2e-46 187.2 148 70.3
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 1.2e-45 186.8 148 70.3
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 1.2e-45 186.8 146 70.5
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 1.6e-45 186.4 148 69.6
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 1.6e-45 186.4 148 68.9
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.6e-45 186.4 148 69.6
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.6e-45 186.4 148 69.6
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 1.6e-45 186.4 148 69.6
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 4.6e-45 184.9 148 69.6
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.7e-44 183.0 140 70.0
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 3.9e-44 181.8 141 70.2
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 5.0e-44 181.4 144 71.5
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 3.3e-43 178.7 139 69.1
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 5.6e-43 177.9 148 67.6
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 1.4e-41 173.3 146 66.4
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.5e-40 169.9 148 67.6
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 4.4e-40 168.3 144 70.1
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 1.7e-39 166.4 147 66.0
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 1.4e-38 163.3 147 65.3
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 1.6e-37 159.8 146 65.1
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.6e-37 159.8 137 64.2
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 8.6e-36 154.1 139 61.2
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 1.9e-35 152.9 210 48.6
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 2.5e-35 152.5 148 63.5
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 4.3e-35 151.8 143 62.9
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 1.6e-34 149.8 107 77.6
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 8.1e-34 147.5 140 65.0
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 8.1e-34 147.5 137 60.6
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 1.4e-33 146.7 105 77.1
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 1.8e-33 146.4 106 76.4
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 5.8e-32 141.4 146 58.2
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 3.8e-31 138.7 137 52.6
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 3.8e-31 138.7 107 74.8
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 2.4e-30 136.0 138 52.9
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.4e-30 136.0 143 58.7
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 1.2e-29 133.7 145 56.6
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 2.7e-29 132.5 105 71.4
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 6.0e-29 131.3 108 66.7
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 6.0e-29 131.3 104 70.2
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.7e-28 129.8 143 56.6
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 3.0e-28 129.0 106 69.8
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 1.5e-27 126.7 137 48.9
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.3e-27 125.6 173 50.3
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.1e-26 122.9 91 74.7
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 6.2e-26 121.3 144 53.5
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.9e-23 112.5 81 79.0
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 4.9e-23 111.7 143 51.7
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.7e-21 105.9 143 49.0
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 2.7e-21 105.9 143 49.0
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 6.6e-20 101.3 130 51.5
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 1.2e-16 90.5 66 74.2
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 2.3e-12 76.3 141 37.6
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 2.4e-09 66.2 50 64.0
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.4e-08 62.4 127 38.6
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 9.9e-08 60.8 40 75.0
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 1.7e-07 60.1 138 30.4
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.7e-07 60.1 46 65.2
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 7.1e-06 54.7 42 61.9


User provided reference genes

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