Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 1.9e-144 516.2 325 100.0
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 5.8e-77 292.0 429 56.6
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 8.4e-76 288.1 417 58.0
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 3.5e-66 256.1 286 64.7
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 3.4e-61 239.6 304 58.6
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-53 214.2 335 49.3
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 7.1e-51 205.3 344 49.4
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 4.3e-48 196.1 333 47.1
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 4.0e-46 189.5 288 51.7
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 7.6e-45 185.3 322 45.7
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 1.7e-44 184.1 340 45.9
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 4.9e-44 182.6 342 45.3
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 8.4e-44 181.8 342 45.3
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 2.1e-42 177.2 333 46.2
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 6.7e-41 172.2 297 47.5
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 6.7e-41 172.2 297 47.5
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-37 161.4 351 43.0
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-32 144.4 274 49.3
PSO017G7049 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-32 144.4 206 45.1
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 4.3e-32 142.9 327 45.0
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 1.6e-31 141.0 314 40.1
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 1.2e-26 124.8 270 43.7
PSO573G0016 Papaver somniferum HOM05D005998 ORTHO05D007664 1.6e-26 124.4 210 46.2
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 2.1e-26 124.0 266 43.6
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 1.0e-25 121.7 317 37.9
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.8e-25 120.9 273 41.8
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 1.8e-25 120.9 273 41.8
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 8.8e-25 118.6 169 39.6
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 1.5e-24 117.9 264 43.9
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-24 117.1 265 41.9
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 2.6e-24 117.1 266 41.7
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-24 116.7 315 41.0
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 9.7e-24 115.2 218 50.0
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 1.7e-23 114.4 268 42.5
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 6.3e-23 112.5 169 39.1
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 1.4e-22 111.3 268 42.5
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 2.4e-22 110.5 267 41.9
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 3.1e-22 110.2 266 40.6
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 3.1e-22 110.2 264 42.8
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 4.1e-22 109.8 273 40.3
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 9.1e-22 108.6 263 39.2
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 2.0e-21 107.5 268 39.9
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 2.6e-21 107.1 263 39.5
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 2.6e-21 107.1 263 39.5
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 2.6e-21 107.1 314 34.4
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 5.9e-21 105.9 253 31.2
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 2.2e-20 104.0 268 41.4
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 2.2e-20 104.0 293 38.9
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 5.0e-20 102.8 265 41.1
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 5.0e-20 102.8 274 29.9
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 8.5e-20 102.1 262 30.2
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 1.1e-19 101.7 268 40.7
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 1.9e-19 100.9 266 30.1
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-19 100.5 309 44.0
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 7.2e-19 99.0 268 40.3
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-18 98.2 263 47.5
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 1.6e-18 97.8 143 42.0
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 1.6e-18 97.8 263 38.0
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 2.1e-18 97.4 315 34.6
PSO017G0278 Papaver somniferum HOM05D000500 ORTHO05D007664 2.7e-18 97.1 62 77.4
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 1.0e-17 95.1 260 30.4
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 1.0e-17 95.1 289 35.6
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 1.0e-17 95.1 265 46.0
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 1.4e-17 94.7 265 38.9
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 1.8e-17 94.4 263 38.0
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 1.1e-16 91.7 265 38.5
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 1.5e-16 91.3 266 39.5
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 1.5e-16 91.3 268 38.1
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 2.0e-16 90.9 204 46.6
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 5.7e-16 89.4 166 34.9
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 5.7e-16 89.4 142 40.1
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 9.7e-16 88.6 311 32.5
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.8e-15 87.0 267 36.3
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 4.8e-15 86.3 165 33.3
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 8.2e-15 85.5 278 36.0
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 1.1e-14 85.1 262 36.6
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 1.1e-14 85.1 166 31.9
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 1.4e-14 84.7 167 35.3
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 2.4e-14 84.0 272 36.8
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 2.4e-14 84.0 166 31.9
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 3.1e-14 83.6 258 28.7
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 5.3e-14 82.8 272 36.4
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 5.3e-14 82.8 272 36.4
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 5.3e-14 82.8 261 44.8
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 5.3e-14 82.8 167 33.5
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 1.2e-13 81.6 186 31.7
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 1.6e-13 81.3 190 32.1
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 1.6e-13 81.3 166 32.5
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 2.0e-13 80.9 278 27.7
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 1.7e-12 77.8 265 37.7
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 2.5e-11 73.9 96 46.9
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 3.2e-11 73.6 265 35.5
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 7.2e-11 72.4 98 41.8
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 9.4e-11 72.0 96 41.7
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 9.4e-11 72.0 175 33.1
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 9.4e-11 72.0 103 40.8
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 1.2e-10 71.6 249 38.2
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 1.6e-10 71.2 96 41.7
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 3.6e-10 70.1 96 39.6
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 4.7e-10 69.7 260 35.4
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-09 67.0 73 50.7
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 4.0e-09 66.6 260 35.4
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-08 65.1 164 30.5
TPR.G18042 Trifolium pratense HOM05D002762 ORTHO05D004643 1.2e-08 65.1 301 25.2
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.5e-08 64.7 179 33.0
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 2.0e-08 64.3 143 28.7
Sed0026100 Sechium edule HOM05D001905 ORTHO05D001820 1.7e-07 61.2 203 28.6
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 3.7e-07 60.1 117 33.3
PSO017G5922 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-07 60.1 64 51.6
Medtr1g018790 Medicago truncatula HOM05D001905 ORTHO05D001820 6.3e-07 59.3 164 27.4
Lj5g0027346 Lotus japonicus HOM05D001905 ORTHO05D001820 1.1e-06 58.5 164 28.0
PSO573G0035 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-06 58.5 53 49.1
Lalb_Chr14g0368481 Lupinus albus HOM05D001905 ORTHO05D001820 3.1e-06 57.0 164 29.3
Medtr2g021030 Medicago truncatula HOM05D002762 ORTHO05D004643 3.1e-06 57.0 305 25.9
Ca_13256_v3 Cicer arietinum L. HOM05D001905 ORTHO05D001820 5.3e-06 56.2 164 28.0
Gohir.A06G021300 Gossypium hirsutum HOM05D001905 ORTHO05D001820 9.1e-06 55.5 164 28.0


User provided reference genes

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