Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6711 Papaver somniferum HOM05D002428 ORTHO05D005085 7.6e-62 240.4 124 100.0
PSO170G6100 Papaver somniferum HOM05D002428 ORTHO05D005085 2.8e-48 195.3 112 92.0
PSO674G0088 Papaver somniferum HOM05D002428 ORTHO05D005085 7.2e-44 180.6 137 74.5
Nn1g07810 Nelumbo nucifera HOM05D002428 ORTHO05D005085 4.8e-24 114.8 118 51.7
Nn3g19943 Nelumbo nucifera HOM05D002428 ORTHO05D005085 2.2e-21 105.9 119 51.3
Aqoxy5G00065 Aquilegia oxysepala HOM05D002428 ORTHO05D005085 1.6e-19 99.8 120 48.3
TAR362G0527 Trochodendron aralioides HOM05D002428 ORTHO05D005085 8.0e-19 97.4 121 49.6
Actinidia35873 Actinidia chinensis HOM05D002428 ORTHO05D005085 5.2e-18 94.7 123 43.9
MBI10_g05704_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D005085 5.2e-18 94.7 115 45.2
Actinidia25627 Actinidia chinensis HOM05D002428 ORTHO05D005085 8.8e-18 94.0 123 43.9
Cc03_g07640 Coffea canephora HOM05D002428 ORTHO05D005085 7.5e-17 90.9 115 42.6
Gorai.011G160000 Gossypium raimondii HOM05D002428 ORTHO05D005085 9.8e-17 90.5 98 51.0
vmacro00484 Vaccinium macrocarpon HOM05D002428 ORTHO05D005085 1.7e-16 89.7 120 42.5
Gohir.D10G143200 Gossypium hirsutum HOM05D002428 ORTHO05D005085 2.2e-16 89.4 98 51.0
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 2.8e-16 89.0 117 47.0
Rhsim09G0054900 Rhododendron simsii HOM05D002428 ORTHO05D005085 3.7e-16 88.6 117 44.4
CSS0050051 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D005085 4.8e-16 88.2 119 43.7
CDE09G0695 Ceratophyllum demersum HOM05D002428 ORTHO05D005085 6.3e-16 87.8 115 42.6
Gohir.A10G122900 Gossypium hirsutum HOM05D002428 ORTHO05D005085 6.3e-16 87.8 98 51.0
Duzib212G0991 Durio zibethinus HOM05D002428 ORTHO05D005085 1.8e-15 86.3 98 51.0
Lj6g0025937 Lotus japonicus HOM05D002428 ORTHO05D005085 1.8e-15 86.3 103 48.5
COL.COLO4_20262 Corchorus olitorius HOM05D002428 ORTHO05D005085 3.1e-15 85.5 98 49.0
CSS0020338 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D005085 5.4e-15 84.7 119 43.7
Dinv38249 Davidia involucrata HOM05D002428 ORTHO05D005085 5.4e-15 84.7 117 45.3
Duzib151G0814 Durio zibethinus HOM05D002428 ORTHO05D005085 9.1e-15 84.0 115 45.2
Manes.15G052100 Manihot esculenta HOM05D002428 ORTHO05D005085 9.1e-15 84.0 99 49.5
MD04G1005300 Malus domestica HOM05D002428 ORTHO05D005085 1.2e-14 83.6 98 49.0
BcaB04g20405 Brassica carinata HOM05D002428 ORTHO05D005085 3.5e-14 82.0 99 48.5
A01p31110 Brassica napus HOM05D002428 ORTHO05D005085 4.5e-14 81.6 99 46.5
BraA01t03235Z Brassica rapa HOM05D002428 ORTHO05D005085 4.5e-14 81.6 99 46.5
MD04G1005200 Malus domestica HOM05D002428 ORTHO05D005085 5.9e-14 81.3 98 48.0
MD07G1287300 Malus domestica HOM05D002428 ORTHO05D005085 5.9e-14 81.3 98 48.0
SalBow8G0494 Salvia bowleyana HOM05D002428 ORTHO05D005085 5.9e-14 81.3 112 42.0
CDE11G0336 Ceratophyllum demersum HOM05D002428 ORTHO05D005085 7.7e-14 80.9 115 39.1
Gorai.006G221300 Gossypium raimondii HOM05D002428 ORTHO05D005085 7.7e-14 80.9 98 49.0
THA.LOC104808717 Tarenaya hassleriana HOM05D002428 ORTHO05D005085 7.7e-14 80.9 95 44.2
Thecc.04G206400 Theobroma cacao HOM05D002428 ORTHO05D005085 7.7e-14 80.9 98 49.0
Gohir.A09G204000 Gossypium hirsutum HOM05D002428 ORTHO05D005085 1.0e-13 80.5 98 48.0
Gohir.D09G197800 Gossypium hirsutum HOM05D002428 ORTHO05D005085 1.0e-13 80.5 98 48.0
Lalb_Chr20g0120151 Lupinus albus HOM05D002428 ORTHO05D005085 1.3e-13 80.1 115 41.7
Nitab4.5_0003750g0010 Nicotiana tabacum HOM05D002428 ORTHO05D005085 1.3e-13 80.1 114 44.7
Prupe.1G005000 Prunus persica HOM05D002428 ORTHO05D005085 1.3e-13 80.1 98 45.9
FvH4_4g00480 Fragaria vesca HOM05D002428 ORTHO05D005085 1.7e-13 79.7 124 41.1
C01p39650 Brassica napus HOM05D002428 ORTHO05D005085 2.2e-13 79.3 99 45.5
FAN17G2111 Fragaria x ananassa HOM05D002428 ORTHO05D005085 2.2e-13 79.3 98 48.0
Peaxi162Scf00047g00728 Petunia axillaris HOM05D002428 ORTHO05D005085 2.2e-13 79.3 112 45.5
BcaC01g03347 Brassica carinata HOM05D002428 ORTHO05D005085 2.9e-13 79.0 96 46.9
FAN12G1312 Fragaria x ananassa HOM05D002428 ORTHO05D005085 2.9e-13 79.0 98 46.9
Ciclev10005183m.g Citrus clementina HOM05D002428 ORTHO05D005085 3.8e-13 78.6 104 47.1
Haze_11595 Corylus avellana HOM05D002428 ORTHO05D005085 3.8e-13 78.6 99 48.5
TPR.G26368 Trifolium pratense HOM05D002428 ORTHO05D005085 3.8e-13 78.6 98 46.9
VMungo0540G1973 Vigna mungo HOM05D002428 ORTHO05D005085 3.8e-13 78.6 94 45.7
BraA03t13484Z Brassica rapa HOM05D002428 ORTHO05D005085 5.0e-13 78.2 96 45.8
Nitab4.5_0004974g0030 Nicotiana tabacum HOM05D002428 ORTHO05D005085 5.0e-13 78.2 95 49.5
MSTRG.9822 Avicennia marina HOM05D002428 ORTHO05D005085 6.5e-13 77.8 112 43.8
A03p43460 Brassica napus HOM05D002428 ORTHO05D005085 6.5e-13 77.8 96 45.8
DCAR_026601 Daucus carota HOM05D002428 ORTHO05D005085 6.5e-13 77.8 114 39.5
Thhalv10002585m.g Eutrema salsugineum HOM05D002428 ORTHO05D005085 6.5e-13 77.8 98 44.9
Oeu018226.1 Olea europaea HOM05D002428 ORTHO05D005085 8.5e-13 77.4 116 42.2
AT3G24160 Arabidopsis thaliana HOM05D002428 ORTHO05D005085 1.1e-12 77.0 95 46.3
A07p08320 Brassica napus HOM05D002428 ORTHO05D005085 1.5e-12 76.6 100 45.0
BolC1t03917H Brassica oleracea HOM05D002428 ORTHO05D005085 1.5e-12 76.6 99 44.4
BraA07t28615Z Brassica rapa HOM05D002428 ORTHO05D005085 1.5e-12 76.6 100 45.0
CARHR100040 Cardamine hirsuta HOM05D002428 ORTHO05D005085 1.5e-12 76.6 93 45.2
Potri.003G178400 Populus trichocarpa HOM05D002428 ORTHO05D005085 1.5e-12 76.6 97 48.5
RcHm_v2.0_Chr4g0385911 Rosa chinensis HOM05D002428 ORTHO05D005085 1.5e-12 76.6 98 44.9
THA.LOC104804814 Tarenaya hassleriana HOM05D002428 ORTHO05D005085 1.5e-12 76.6 94 45.7
HPP92_020844 Vanilla planifolia HOM05D002428 ORTHO05D005085 2.5e-12 75.9 117 41.0
GSVIVG01021082001 Vitis vinifera HOM05D002428 ORTHO05D005085 2.5e-12 75.9 116 41.4
Manes.03G149000 Manihot esculenta HOM05D002428 ORTHO05D005085 3.2e-12 75.5 93 46.2
Atru.chr4.1736 Acer truncatum HOM05D002428 ORTHO05D005085 4.2e-12 75.1 116 41.4
AL3G39100 Arabidopsis lyrata HOM05D002428 ORTHO05D005085 4.2e-12 75.1 96 45.8
Ca_00857_v3 Cicer arietinum L. HOM05D002428 ORTHO05D005085 4.2e-12 75.1 98 43.9
Medtr2g030560 Medicago truncatula HOM05D002428 ORTHO05D005085 4.2e-12 75.1 113 39.8
C03p53420 Brassica napus HOM05D002428 ORTHO05D005085 5.5e-12 74.7 96 44.8
BolC3t17603H Brassica oleracea HOM05D002428 ORTHO05D005085 5.5e-12 74.7 96 44.8
CAN.G500.14 Capsicum annuum HOM05D002428 ORTHO05D005085 5.5e-12 74.7 110 42.7
RcHm_v2.0_Chr4g0385791 Rosa chinensis HOM05D002428 ORTHO05D005085 5.5e-12 74.7 98 44.9
PGSC0003DMG400029636 Solanum tuberosum HOM05D002428 ORTHO05D005085 5.5e-12 74.7 93 48.4
arahy.Tifrunner.gnm1.ann1.2WG9BE Arachis hypogaea HOM05D002428 ORTHO05D005085 7.2e-12 74.3 107 43.0
arahy.Tifrunner.gnm1.ann1.CV7WQS Arachis hypogaea HOM05D002428 ORTHO05D005085 7.2e-12 74.3 107 43.0
Lsat_1_v5_gn_6_59860 Lactuca sativa HOM05D002428 ORTHO05D005085 7.2e-12 74.3 99 43.4
Sopen09g034710 Solanum pennellii HOM05D002428 ORTHO05D005085 7.2e-12 74.3 93 48.4
ATR0736G031 Amborella trichopoda HOM05D002428 ORTHO05D005085 9.4e-12 73.9 117 40.2
BcaC06g35609 Brassica carinata HOM05D002428 ORTHO05D005085 9.4e-12 73.9 102 42.2
C07p12990 Brassica napus HOM05D002428 ORTHO05D005085 9.4e-12 73.9 102 42.2
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 9.4e-12 73.9 98 44.9
Sabra01G0034700 Salix brachista HOM05D002428 ORTHO05D005085 9.4e-12 73.9 100 49.0
Potri.001G049800 Populus trichocarpa HOM05D002428 ORTHO05D005085 1.2e-11 73.6 97 47.4
BolC7t41792H Brassica oleracea HOM05D002428 ORTHO05D005085 1.6e-11 73.2 102 42.2
CANSAT78G0072 Cannabis sativa HOM05D002428 ORTHO05D005085 1.6e-11 73.2 98 43.9
Sp3g21770 Schrenkiella parvula HOM05D002428 ORTHO05D005085 1.6e-11 73.2 97 44.3
Sed0022855 Sechium edule HOM05D002428 ORTHO05D005085 2.1e-11 72.8 98 44.9
Gohir.A02G023600 Gossypium hirsutum HOM05D002428 ORTHO05D005085 2.7e-11 72.4 104 42.3
Sed0008750 Sechium edule HOM05D002428 ORTHO05D005085 2.7e-11 72.4 98 44.9
BcaB03g14602 Brassica carinata HOM05D002428 ORTHO05D005085 3.6e-11 72.0 99 42.4
Gorai.005G034400 Gossypium raimondii HOM05D002428 ORTHO05D005085 4.7e-11 71.6 104 40.4
Cpa.g.sc1744.1 Carica papaya HOM05D002428 ORTHO05D005085 6.1e-11 71.2 116 40.5
Sabra03G0130800 Salix brachista HOM05D002428 ORTHO05D005085 6.1e-11 71.2 99 47.5
BcaB06g26571 Brassica carinata HOM05D002428 ORTHO05D005085 8.0e-11 70.9 99 43.4
CsaV3_3G011070 Cucumis sativus L. HOM05D002428 ORTHO05D005085 8.0e-11 70.9 100 44.0
QL06p024041 Quercus lobata HOM05D002428 ORTHO05D005085 8.0e-11 70.9 99 44.4
SEGI_17850 Sequoiadendron giganteum HOM05D002428 ORTHO05D005085 8.0e-11 70.9 121 39.7
Glyma.09G025700 Glycine max HOM05D002428 ORTHO05D005085 1.0e-10 70.5 98 42.9
MELO3C006320.2 Cucumis melo HOM05D002428 ORTHO05D005085 1.4e-10 70.1 98 43.9
Lalb_Chr18g0058061 Lupinus albus HOM05D002428 ORTHO05D005085 1.4e-10 70.1 116 44.0
Aa31LG8G10690 Aethionema arabicum HOM05D002428 ORTHO05D005085 1.8e-10 69.7 95 41.1
Glyma.15G131900 Glycine max HOM05D002428 ORTHO05D005085 1.8e-10 69.7 98 43.9
HanXRQChr15g0484251 Helianthus annuus HOM05D002428 ORTHO05D005085 1.8e-10 69.7 105 41.0
ClCG05G003400 Citrullus lanatus HOM05D002428 ORTHO05D005085 3.0e-10 68.9 98 41.8
Phvul.006G126700 Phaseolus vulgaris HOM05D002428 ORTHO05D005085 3.0e-10 68.9 93 43.0
AUR62032922 Chenopodium quinoa HOM05D002428 ORTHO05D005085 4.0e-10 68.6 116 42.2
Eucgr.G01177 Eucalyptus grandis HOM05D002428 ORTHO05D005085 2.0e-09 66.2 99 40.4
Eucgr.H02858 Eucalyptus grandis HOM05D002428 ORTHO05D005085 2.0e-09 66.2 99 40.4
CiPaw.01G122700 Carya illinoinensis HOM05D002428 ORTHO05D005085 2.6e-09 65.9 99 42.4
AUR62020812 Chenopodium quinoa HOM05D002428 ORTHO05D005085 3.4e-09 65.5 116 39.7
Psat1g166480 Pisum sativum HOM05D002428 ORTHO05D005085 3.4e-09 65.5 98 40.8
unitig_26.g9776 Utricularia gibba HOM05D002428 ORTHO05D005085 3.4e-09 65.5 93 41.9
Carub.0003s2434 Capsella rubella HOM05D002428 ORTHO05D005085 4.4e-09 65.1 95 41.1
PGR031G3462 Punica granatum HOM05D002428 ORTHO05D005085 7.5e-09 64.3 113 38.9
Zm00001eb038510 Zea mays HOM05D002428 ORTHO05D005085 7.5e-09 64.3 98 41.8
ECA238G3133 Erigeron canadensis HOM05D002428 ORTHO05D005085 1.3e-08 63.5 98 39.8
SGA_v2.0_scaffold72G24051 Striga asiatica HOM05D002428 ORTHO05D005085 2.2e-08 62.8 103 37.9
Os08g0567000 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D005085 2.8e-08 62.4 113 33.6
Psat7g008880 Pisum sativum HOM05D002428 ORTHO05D005085 8.3e-08 60.8 98 39.8
Gohir.D02G031000 Gossypium hirsutum HOM05D002428 ORTHO05D005085 1.4e-07 60.1 104 37.5
TAR633G2286 Trochodendron aralioides HOM05D002428 ORTHO05D005085 1.8e-07 59.7 113 38.9
Sc13g0000100 Simmondsia chinensis HOM05D002428 ORTHO05D005085 3.5e-06 55.5 98 43.9


User provided reference genes

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