Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 0.0e+00 2154.4 1079 100.0
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 0.0e+00 2084.3 1079 97.6
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 2.3e-295 1019.2 1143 52.9
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 3.8e-274 948.7 1200 49.2
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 1.0e-271 940.6 1127 50.3
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 3.7e-253 879.0 1198 45.8
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 3.7e-253 879.0 1068 48.7
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 7.2e-249 864.8 1182 46.0
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 2.7e-248 862.8 1212 45.5
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 8.8e-247 857.8 1180 45.8
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 4.5e-243 845.5 1172 45.6
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.7e-242 843.6 1152 45.3
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 1.9e-241 840.1 1174 45.1
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 7.2e-241 838.2 1173 45.2
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 4.7e-240 835.5 1165 44.7
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.0e-239 834.3 1180 45.0
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.8e-239 833.6 1114 47.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 3.3e-238 829.3 1185 44.0
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 7.4e-238 828.2 1171 45.8
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 7.7e-235 818.1 1177 44.5
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.7e-234 817.0 1187 44.1
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 2.5e-233 813.1 1125 45.3
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.6e-232 810.4 1163 45.0
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.5e-230 803.9 1183 42.7
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.8e-229 799.7 1226 42.8
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 6.3e-229 798.5 1166 45.4
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.4e-228 797.3 1163 44.4
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 1.8e-228 797.0 1204 43.7
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.9e-226 789.6 1230 42.4
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 1.5e-225 787.3 1142 44.6
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 2.1e-224 783.5 883 50.1
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.0e-223 781.2 950 48.0
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 3.1e-220 769.6 1165 43.3
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 1.2e-219 767.7 1171 44.2
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 4.5e-219 765.8 1132 44.4
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 3.8e-218 762.7 1131 44.5
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 2.5e-217 760.0 878 50.3
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 3.3e-217 759.6 1145 44.3
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 3.0e-215 753.1 1175 42.5
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 4.5e-211 739.2 1088 42.9
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 4.5e-211 739.2 1103 42.2
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 5.6e-209 732.3 1077 42.8
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 1.2e-206 724.5 1159 41.1
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.1e-204 718.0 1056 43.2
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 2.4e-204 716.8 1170 42.1
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 5.4e-204 715.7 1125 42.8
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 4.6e-203 712.6 1156 41.4
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.3e-202 711.1 1124 42.8
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 2.3e-202 710.3 560 63.2
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 3.9e-202 709.5 892 47.1
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.1e-199 701.4 1112 41.8
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 8.9e-199 698.4 1057 42.3
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 1.5e-198 697.6 1132 40.8
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 3.7e-197 693.0 1140 40.6
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 8.3e-197 691.8 1116 41.2
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.4e-196 691.0 1094 41.8
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 2.4e-196 690.3 1061 41.8
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 4.1e-196 689.5 1113 41.7
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 5.4e-196 689.1 1127 41.9
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 7.0e-196 688.7 1113 42.0
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 7.0e-196 688.7 836 47.2
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 9.2e-196 688.3 1092 42.2
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 9.2e-196 688.3 1083 41.4
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 9.2e-196 688.3 944 44.3
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 2.1e-195 687.2 1083 43.1
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 1.0e-194 684.9 1108 41.9
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.0e-194 684.9 1087 41.6
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 3.9e-194 682.9 1069 41.8
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 3.3e-193 679.9 1152 40.2
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 5.6e-193 679.1 1071 41.8
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 1.4e-191 674.5 1092 42.2
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.2e-190 671.4 864 46.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.2e-190 671.4 1163 40.4
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 2.0e-190 670.6 1120 41.2
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 2.6e-190 670.2 1026 42.8
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 1.4e-188 664.5 1075 41.6
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 3.2e-188 663.3 1169 39.9
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 5.4e-188 662.5 565 58.8
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 6.6e-186 655.6 1064 41.9
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 1.9e-185 654.1 1180 38.0
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.2e-184 651.4 1017 40.2
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 6.8e-183 645.6 1160 39.7
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.5e-182 644.4 1033 40.8
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.2e-181 640.6 1025 40.4
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 2.9e-181 640.2 1061 41.5
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 2.9e-181 640.2 576 55.4
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.9e-180 637.5 915 43.6
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 3.2e-180 636.7 1094 40.5
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 3.2e-180 636.7 963 41.4
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 9.2e-180 635.2 997 40.8
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 9.2e-180 635.2 889 43.3
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 1.2e-179 634.8 1088 38.7
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 2.7e-179 633.6 1090 40.5
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 3.3e-177 626.7 930 44.2
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 4.3e-177 626.3 1037 41.9
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.6e-176 624.4 812 48.8
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 3.8e-173 613.2 1110 37.9
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.1e-168 597.4 1157 37.9
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 5.3e-159 566.2 887 39.9
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 7.9e-155 552.4 959 40.1
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 4.6e-139 500.0 459 56.2
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.2e-128 464.5 520 51.2
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 4.8e-128 463.4 924 36.7
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 7.4e-121 439.5 314 66.9
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.8e-120 437.6 901 37.0
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 4.8e-120 436.8 498 44.6
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 1.8e-119 434.9 513 45.8
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 6.5e-117 426.4 1101 33.2
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 2.5e-116 424.5 732 36.5
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 5.5e-116 423.3 538 44.4
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.0e-114 419.1 1151 32.1
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 1.3e-112 412.1 555 41.1
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 6.3e-104 383.3 881 34.7
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 4.7e-83 313.9 753 35.6
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 5.2e-74 283.9 232 61.6
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.4e-71 275.8 693 35.6
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.8e-66 258.8 224 57.1
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.9e-55 222.2 725 31.4
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.9e-31 142.5 289 33.9
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.5e-25 122.9 587 29.3
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.3e-19 103.2 85 56.5
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 2.2e-19 102.4 187 36.9
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 2.2e-16 92.4 158 41.1
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 2.5e-15 89.0 428 28.5
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 2.3e-13 82.4 61 57.4
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 3.0e-13 82.0 100 45.0
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 6.7e-13 80.9 68 55.9
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 8.8e-13 80.5 51 66.7
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 8.8e-13 80.5 51 66.7
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.6e-12 79.0 171 35.7
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 9.7e-12 77.0 79 46.8
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.6e-06 59.7 34 73.5


User provided reference genes

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