Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6556 Papaver somniferum HOM05D004679 ORTHO05D005524 9.3e-160 567.0 325 100.0
Nn3g17866 Nelumbo nucifera HOM05D004679 ORTHO05D005524 3.1e-30 136.7 353 39.7
TAR629G3220 Trochodendron aralioides HOM05D004679 ORTHO05D005524 9.1e-30 135.2 325 43.1
TAR371G1108 Trochodendron aralioides HOM05D004679 ORTHO05D005524 2.6e-29 133.7 353 34.6
Aqoxy3G00274 Aquilegia oxysepala HOM05D004679 ORTHO05D005524 5.9e-29 132.5 351 43.6
Nn4g23867 Nelumbo nucifera HOM05D004679 ORTHO05D005524 1.9e-27 127.5 335 40.0
Manes.06G066900 Manihot esculenta HOM05D004679 ORTHO05D005524 4.1e-22 109.8 276 42.4
CSS0006602 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 4.5e-21 106.3 252 41.3
CSS0017035 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 5.9e-21 105.9 252 40.9
Dinv31629 Davidia involucrata HOM05D004679 ORTHO05D005524 5.9e-21 105.9 270 38.1
CiPaw.16G065600 Carya illinoinensis HOM05D004679 ORTHO05D005524 6.5e-20 102.4 328 32.9
TWI31G1336 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 9.4e-19 98.6 278 34.5
Duzib268G0767 Durio zibethinus HOM05D004679 ORTHO05D005524 1.6e-18 97.8 276 30.1
TWI79G1695 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 6.1e-18 95.9 279 38.0
Gohir.A03G147600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 1.4e-17 94.7 302 28.8
Gorai.005G192000 Gossypium raimondii HOM05D004679 ORTHO05D005524 1.8e-17 94.4 302 28.8
Thecc.02G227400 Theobroma cacao HOM05D004679 ORTHO05D005524 3.0e-17 93.6 301 33.9
FAN12G3270 Fragaria x ananassa HOM05D004679 ORTHO05D005524 3.9e-17 93.2 350 37.7
FAN22G1304 Fragaria x ananassa HOM05D004679 ORTHO05D005524 3.9e-17 93.2 350 38.3
FvH4_4g27210 Fragaria vesca HOM05D004679 ORTHO05D005524 5.2e-17 92.8 350 37.4
QL01p041129 Quercus lobata HOM05D004679 ORTHO05D005524 5.2e-17 92.8 302 38.7
FAN07G0705 Fragaria x ananassa HOM05D004679 ORTHO05D005524 6.7e-17 92.4 356 34.3
MBI09_g16518_MAGBIO Magnolia biondii HOM05D004679 ORTHO05D005524 1.5e-16 91.3 348 28.2
Sabra10G0093600 Salix brachista HOM05D004679 ORTHO05D005524 2.6e-16 90.5 325 38.2
Potri.008G121700 Populus trichocarpa HOM05D004679 ORTHO05D005524 4.4e-16 89.7 284 39.4
Cfa018585 Carpinus fangiana HOM05D004679 ORTHO05D005524 5.7e-16 89.4 266 39.5
FAN12G2517 Fragaria x ananassa HOM05D004679 ORTHO05D005524 1.7e-15 87.8 350 36.6
Hma1.2p1_0061F.1_g033750 Hydrangea macrophylla HOM05D004679 ORTHO05D005524 2.8e-15 87.0 257 40.5
Duzib248G1266 Durio zibethinus HOM05D004679 ORTHO05D005524 8.2e-15 85.5 295 33.6
Eucgr.B03012 Eucalyptus grandis HOM05D004679 ORTHO05D005524 8.2e-15 85.5 262 31.7
Haze_17496 Corylus avellana HOM05D004679 ORTHO05D005524 1.1e-14 85.1 266 39.5
Solyc05g009420.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 1.1e-14 85.1 313 35.1
Ciclev10015600m.g Citrus clementina HOM05D004679 ORTHO05D005524 1.4e-14 84.7 361 33.8
Nitab4.5_0003715g0040 Nicotiana tabacum HOM05D004679 ORTHO05D005524 1.4e-14 84.7 315 28.6
Sopen05g005230 Solanum pennellii HOM05D004679 ORTHO05D005524 1.4e-14 84.7 313 35.1
Dinv21072 Davidia involucrata HOM05D004679 ORTHO05D005524 1.8e-14 84.3 162 38.9
Potri.010G123600 Populus trichocarpa HOM05D004679 ORTHO05D005524 1.8e-14 84.3 286 33.2
CiPaw.15G086800 Carya illinoinensis HOM05D004679 ORTHO05D005524 5.3e-14 82.8 275 30.2
Duzib251G0437 Durio zibethinus HOM05D004679 ORTHO05D005524 5.3e-14 82.8 356 25.8
COL.COLO4_05113 Corchorus olitorius HOM05D004679 ORTHO05D005524 7.0e-14 82.4 322 26.4
Lj6P756T16 Lonicera japonica HOM05D004679 ORTHO05D005524 7.0e-14 82.4 280 31.8
CSS0014673 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 9.1e-14 82.0 288 36.8
CSS0010437 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 1.2e-13 81.6 313 35.8
Nitab4.5_0005669g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 1.6e-13 81.3 311 27.3
Manes.14G103500 Manihot esculenta HOM05D004679 ORTHO05D005524 2.0e-13 80.9 282 39.7
Sabra08G0092400 Salix brachista HOM05D004679 ORTHO05D005524 2.6e-13 80.5 273 42.9
Gohir.D02G170800 Gossypium hirsutum HOM05D004679 ORTHO05D005524 5.9e-13 79.3 164 33.5
RcHm_v2.0_Chr4g0435001 Rosa chinensis HOM05D004679 ORTHO05D005524 7.7e-13 79.0 352 36.6
Actinidia16661 Actinidia chinensis HOM05D004679 ORTHO05D005524 1.3e-12 78.2 171 36.8
PGSC0003DMG400014542 Solanum tuberosum HOM05D004679 ORTHO05D005524 1.7e-12 77.8 264 35.6
TPR.G27958 Trifolium pratense HOM05D004679 ORTHO05D005524 1.7e-12 77.8 270 29.6
Cc11_g10010 Coffea canephora HOM05D004679 ORTHO05D005524 3.8e-12 76.6 257 35.4
Rhsim09G0106900 Rhododendron simsii HOM05D004679 ORTHO05D005524 1.9e-11 74.3 237 31.6
CsaV3_5G034410 Cucumis sativus L. HOM05D004679 ORTHO05D005524 5.5e-11 72.8 293 26.6
CANSAT01G1145 Cannabis sativa HOM05D004679 ORTHO05D005524 7.2e-11 72.4 260 37.3
ClCG05G022630 Citrullus lanatus HOM05D004679 ORTHO05D005524 1.6e-10 71.2 316 25.3
Prupe.1G312600 Prunus persica HOM05D004679 ORTHO05D005524 2.1e-10 70.9 281 31.3
MELO3C012256.2 Cucumis melo HOM05D004679 ORTHO05D005524 2.7e-10 70.5 302 26.2
Ca_11162_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 3.6e-10 70.1 182 36.3
Medtr5g056480 Medicago truncatula HOM05D004679 ORTHO05D005524 3.6e-10 70.1 264 36.7
Ca_07534_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 6.1e-10 69.3 275 38.9
MD16G1041500 Malus domestica HOM05D004679 ORTHO05D005524 1.0e-09 68.6 356 32.6
CDE06G1731 Ceratophyllum demersum HOM05D004679 ORTHO05D005524 1.4e-09 68.2 254 27.2
Eucgr.G02311 Eucalyptus grandis HOM05D004679 ORTHO05D005524 4.0e-09 66.6 167 35.3
Psat2g095800 Pisum sativum HOM05D004679 ORTHO05D005524 4.0e-09 66.6 268 32.1
Atru.chr11.115 Acer truncatum HOM05D004679 ORTHO05D005524 5.2e-09 66.2 332 34.6
Phvul.003G030600 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 5.2e-09 66.2 319 26.0
Glyma.10G273200 Glycine max HOM05D004679 ORTHO05D005524 8.8e-09 65.5 177 32.8
VMungo1215G2497 Vigna mungo HOM05D004679 ORTHO05D005524 8.8e-09 65.5 323 30.3
arahy.Tifrunner.gnm1.ann1.ZDDP39 Arachis hypogaea HOM05D004679 ORTHO05D005524 1.2e-08 65.1 278 28.1
DCAR_026738 Daucus carota HOM05D004679 ORTHO05D005524 1.2e-08 65.1 275 27.3
Glyma.20G116700 Glycine max HOM05D004679 ORTHO05D005524 1.2e-08 65.1 121 37.2
Glyma.08G261000 Glycine max HOM05D004679 ORTHO05D005524 2.6e-08 63.9 322 32.6
Lsat_1_v5_gn_4_15920 Lactuca sativa HOM05D004679 ORTHO05D005524 9.7e-08 62.0 251 29.1
Medtr1g110550 Medicago truncatula HOM05D004679 ORTHO05D005524 2.2e-07 60.8 104 44.2
VMungo0720G2998 Vigna mungo HOM05D004679 ORTHO05D005524 3.7e-07 60.1 126 38.1
MD13G1040500 Malus domestica HOM05D004679 ORTHO05D005524 8.2e-07 58.9 342 26.3
Sed0013939 Sechium edule HOM05D004679 ORTHO05D005524 8.2e-07 58.9 299 26.1
Sed0011079 Sechium edule HOM05D004679 ORTHO05D005524 1.1e-06 58.5 300 25.0
Glyma.01G080500 Glycine max HOM05D004679 ORTHO05D005524 1.8e-06 57.8 157 31.2
Psat6g226440 Pisum sativum HOM05D004679 ORTHO05D005524 3.1e-06 57.0 159 34.0
THA.LOC104821925 Tarenaya hassleriana HOM05D004679 ORTHO05D005524 3.1e-06 57.0 259 35.5
HanXRQChr16g0529431 Helianthus annuus HOM05D004679 ORTHO05D005524 4.1e-06 56.6 248 35.1
SalBow8G2470 Salvia bowleyana HOM05D004679 ORTHO05D005524 7.0e-06 55.8 278 26.6
Phvul.007G028300 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 9.1e-06 55.5 130 33.8
TPR.G18826 Trifolium pratense HOM05D004679 ORTHO05D005524 9.1e-06 55.5 127 33.9


User provided reference genes

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