Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6410 Papaver somniferum HOM05D007902 ORTHO05D009839 2.2e-122 442.2 211 100.0
PSO407G0011 Papaver somniferum HOM05D007902 ORTHO05D009839 9.6e-73 277.3 157 86.6
Aqoxy4G02352 Aquilegia oxysepala HOM05D007902 ORTHO05D009839 2.5e-36 156.4 196 47.4
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 3.6e-35 152.5 195 49.7
Nn2g10362 Nelumbo nucifera HOM05D007902 ORTHO05D009839 4.1e-31 139.0 200 42.0
Dinv21823 Davidia involucrata HOM05D007902 ORTHO05D009839 9.1e-31 137.9 203 43.3
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 4.5e-30 135.6 187 43.9
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 5.0e-29 132.1 197 42.6
Ciclev10032767m.g Citrus clementina HOM05D007902 ORTHO05D009839 1.6e-27 127.1 179 43.6
PGR142G4074 Punica granatum HOM05D007902 ORTHO05D009839 3.6e-27 125.9 235 34.9
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 2.3e-26 123.2 184 40.2
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 3.0e-26 122.9 177 41.2
Cc02_g05590 Coffea canephora HOM05D007902 ORTHO05D009839 8.8e-26 121.3 200 38.5
Lsat_1_v5_gn_9_59200 Lactuca sativa HOM05D007902 ORTHO05D009839 1.1e-25 120.9 205 38.0
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 1.5e-25 120.6 187 41.2
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 2.0e-25 120.2 172 40.7
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 3.3e-25 119.4 184 39.7
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 5.7e-25 118.6 165 43.6
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 9.7e-25 117.9 174 39.7
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 2.2e-24 116.7 178 41.0
vmacro09979 Vaccinium macrocarpon HOM05D007902 ORTHO05D009839 2.2e-24 116.7 156 45.5
CiPaw.01G304600 Carya illinoinensis HOM05D007902 ORTHO05D009839 1.1e-23 114.4 183 41.5
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 1.8e-23 113.6 191 38.2
Sopen06g015820 Solanum pennellii HOM05D007902 ORTHO05D009839 5.3e-23 112.1 175 43.4
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 1.2e-22 110.9 194 37.1
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 1.2e-22 110.9 192 38.5
Haze_17334 Corylus avellana HOM05D007902 ORTHO05D009839 2.0e-22 110.2 193 35.8
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 2.0e-22 110.2 192 39.6
Peaxi162Scf00464g00015 Petunia axillaris HOM05D007902 ORTHO05D009839 2.0e-22 110.2 191 38.7
arahy.Tifrunner.gnm1.ann1.C7E7HV Arachis hypogaea HOM05D007902 ORTHO05D009839 4.5e-22 109.0 170 40.6
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 7.7e-22 108.2 185 38.4
Hund13474 Selenicereus undatus HOM05D007902 ORTHO05D009839 7.7e-22 108.2 180 42.2
arahy.Tifrunner.gnm1.ann1.0H4UJT Arachis hypogaea HOM05D007902 ORTHO05D009839 1.0e-21 107.8 170 40.0
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 1.3e-21 107.5 193 35.8
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 1.7e-21 107.1 196 36.7
CAN.G591.5 Capsicum annuum HOM05D007902 ORTHO05D009839 1.7e-21 107.1 181 38.1
FvH4_7g25601 Fragaria vesca HOM05D007902 ORTHO05D009839 1.7e-21 107.1 178 38.2
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 2.9e-21 106.3 173 39.9
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 3.8e-21 105.9 191 39.8
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 3.8e-21 105.9 191 39.8
Prupe.2G261300 Prunus persica HOM05D007902 ORTHO05D009839 3.8e-21 105.9 171 41.5
FAN01G1070 Fragaria x ananassa HOM05D001122 ORTHO05D001877 5.0e-21 105.5 170 39.4
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 5.0e-21 105.5 213 34.3
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 6.5e-21 105.1 177 42.9
FAN03G2841 Fragaria x ananassa HOM05D001122 ORTHO05D001877 6.5e-21 105.1 168 39.3
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 8.5e-21 104.8 184 37.0
Sp6g37500 Schrenkiella parvula HOM05D007902 ORTHO05D009839 1.5e-20 104.0 174 37.9
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 2.5e-20 103.2 182 37.9
Ca_06023_v3 Cicer arietinum L. HOM05D007902 ORTHO05D009839 7.2e-20 101.7 178 38.2
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 1.6e-19 100.5 182 36.8
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 2.1e-19 100.1 176 39.8
CANSAT56G3130 Cannabis sativa HOM05D007902 ORTHO05D009839 4.7e-19 99.0 157 40.8
RcHm_v2.0_Chr1g0371741 Rosa chinensis HOM05D007902 ORTHO05D009839 8.0e-19 98.2 168 38.1
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 1.0e-18 97.8 176 37.5
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 1.0e-18 97.8 150 40.7
MD01G1163300 Malus domestica HOM05D007902 ORTHO05D009839 1.4e-18 97.4 171 36.8
Rhsim09G0183800 Rhododendron simsii HOM05D007902 ORTHO05D009839 1.8e-18 97.1 216 34.7
AL6G15200 Arabidopsis lyrata HOM05D007902 ORTHO05D009839 4.0e-18 95.9 173 37.6
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 1.5e-17 94.0 173 36.4
SalBow5G2004 Salvia bowleyana HOM05D007902 ORTHO05D009839 2.0e-17 93.6 176 36.9
LjContig00357g0001230 Lotus japonicus HOM05D007902 ORTHO05D009839 7.5e-17 91.7 165 37.6
Thhalv10014946m.g Eutrema salsugineum HOM05D007902 ORTHO05D009839 1.3e-16 90.9 153 37.3
FAN06G1561 Fragaria x ananassa HOM05D007902 ORTHO05D009839 3.7e-16 89.4 178 35.4
MD07G1231300 Malus domestica HOM05D007902 ORTHO05D009839 3.7e-16 89.4 170 37.6
BolC2t06195H Brassica oleracea HOM05D007902 ORTHO05D009839 1.1e-15 87.8 182 34.6
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 2.0e-14 83.6 192 35.4
CDE07G0481 Ceratophyllum demersum HOM05D007902 ORTHO05D009839 5.9e-14 82.0 176 34.1
TAR623G0840 Trochodendron aralioides HOM05D007902 ORTHO05D009839 1.3e-13 80.9 108 48.1
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 3.8e-13 79.3 162 32.7
PGSC0003DMG400029078 Solanum tuberosum HOM05D007902 ORTHO05D009839 1.5e-12 77.4 128 39.1
Nitab4.5_0002713g0030 Nicotiana tabacum HOM05D007902 ORTHO05D009839 9.4e-12 74.7 174 35.6
Oeu054429.1 Olea europaea HOM05D007902 ORTHO05D009839 3.6e-11 72.8 80 50.0
unitig_52.g16781 Utricularia gibba HOM05D007902 ORTHO05D009839 3.6e-11 72.8 140 39.3
Psat1g014880 Pisum sativum HOM05D007902 ORTHO05D009839 4.7e-11 72.4 149 34.2
MBI03_g40382_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 8.0e-11 71.6 73 46.6
Medtr0191s0020 Medicago truncatula HOM05D007902 ORTHO05D009839 5.2e-10 68.9 154 35.1
Nitab4.5_0000263g0270 Nicotiana tabacum HOM05D007902 ORTHO05D009839 2.0e-09 67.0 172 32.0
Sc10g0002880 Simmondsia chinensis HOM05D007902 ORTHO05D009839 3.4e-09 66.2 102 42.2
Lj1C1068T20 Lonicera japonica HOM05D007902 ORTHO05D009839 1.3e-08 64.3 70 45.7
Duzib248G1122 Durio zibethinus HOM05D000727 ORTHO05D000541 1.7e-08 63.9 148 33.1
Duzib132G0609 Durio zibethinus HOM05D000727 ORTHO05D000541 3.7e-08 62.8 148 32.4
Lj1A965T42 Lonicera japonica HOM05D007902 ORTHO05D009839 6.3e-08 62.0 70 44.3
ATR0124G023 Amborella trichopoda HOM05D000727 ORTHO05D000541 2.4e-07 60.1 173 30.1
CsaV3_5G021890 Cucumis sativus L. HOM05D000727 ORTHO05D000541 4.1e-07 59.3 151 29.8
AUR62012352 Chenopodium quinoa HOM05D038520 ORTHO05D009839 7.0e-07 58.5 88 35.2
COL.COLO4_08802 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.2e-06 57.8 49 59.2
Thecc.02G153200 Theobroma cacao HOM05D000727 ORTHO05D000541 1.6e-06 57.4 148 31.8
HanXRQChr17g0540661 Helianthus annuus HOM05D000727 ORTHO05D000541 2.0e-06 57.0 164 28.0
HPP92_014761 Vanilla planifolia HOM05D000727 ORTHO05D000541 3.5e-06 56.2 172 29.7
PSO206G0034 Papaver somniferum HOM05D000727 ORTHO05D000541 4.5e-06 55.8 179 32.4
BcaNung01853 Brassica carinata HOM05D003223 ORTHO05D014735 5.9e-06 55.5 61 47.5
Aa31LG11G2850 Aethionema arabicum HOM05D000727 ORTHO05D000541 7.7e-06 55.1 188 26.1


User provided reference genes

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