Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 0.0e+00 1388.6 704 100.0
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 0.0e+00 1354.7 704 97.9
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 1.5e-279 966.1 707 69.7
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 4.8e-270 934.5 714 67.4
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 2.4e-253 879.0 691 65.3
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 8.3e-246 854.0 708 61.7
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 8.6e-243 844.0 709 60.6
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 1.1e-242 843.6 715 60.7
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 5.5e-242 841.3 711 60.5
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 8.0e-241 837.4 709 60.4
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 3.0e-240 835.5 715 60.7
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 8.9e-240 833.9 713 61.2
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 9.8e-239 830.5 713 60.3
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 2.5e-234 815.8 714 59.9
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 3.6e-233 812.0 714 58.0
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 3.6e-233 812.0 714 59.7
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 3.0e-232 808.9 716 57.1
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 6.8e-232 807.7 710 59.2
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 1.5e-231 806.6 710 60.6
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 5.8e-231 804.7 717 59.0
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 7.5e-231 804.3 740 56.8
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.7e-230 803.1 694 60.7
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 4.9e-230 801.6 688 60.8
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 4.1e-229 798.5 715 58.5
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 4.1e-229 798.5 717 57.9
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 4.1e-229 798.5 717 58.0
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 2.7e-228 795.8 715 59.2
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 3.5e-228 795.4 712 58.1
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 4.6e-228 795.0 695 60.3
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 6.0e-228 794.7 719 58.6
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 2.3e-227 792.7 721 57.4
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 3.0e-227 792.3 715 57.3
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 6.6e-227 791.2 738 57.7
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 3.3e-226 788.9 711 57.5
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 5.6e-226 788.1 718 57.7
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 4.7e-225 785.0 737 56.6
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 8.9e-224 780.8 713 56.5
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 1.2e-223 780.4 706 57.9
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 4.4e-223 778.5 746 55.4
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 5.8e-223 778.1 710 58.0
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 7.5e-223 777.7 717 57.6
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.3e-222 776.9 747 55.6
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 1.3e-222 776.9 717 56.3
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.7e-222 776.5 737 55.8
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 4.9e-222 775.0 708 57.3
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 3.2e-221 772.3 710 56.1
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 6.0e-220 768.1 694 58.5
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 6.0e-220 768.1 694 57.8
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 2.3e-219 766.1 717 55.5
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 3.0e-219 765.8 718 55.7
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 8.6e-219 764.2 653 60.9
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 1.9e-218 763.1 717 56.3
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 2.5e-218 762.7 705 56.0
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 5.6e-218 761.5 705 55.7
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 3.6e-217 758.8 717 56.9
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 1.1e-216 757.3 697 56.7
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 2.3e-216 756.1 716 56.0
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 2.3e-216 756.1 710 56.3
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 4.0e-216 755.4 714 55.2
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 3.4e-215 752.3 719 55.1
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.3e-214 750.4 714 55.3
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 1.3e-214 750.4 654 59.3
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.4e-213 746.9 705 54.9
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 1.9e-213 746.5 709 54.6
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 3.2e-213 745.7 709 54.3
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 7.1e-213 744.6 706 56.5
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 2.7e-212 742.7 695 56.1
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 8.6e-211 737.6 668 56.6
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 2.5e-210 736.1 707 57.0
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 4.7e-209 731.9 705 55.0
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 1.8e-208 729.9 700 57.3
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 2.4e-208 729.6 698 54.9
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 1.5e-207 726.9 700 56.7
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 9.9e-207 724.2 700 56.9
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.3e-206 723.8 679 56.4
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 4.9e-206 721.8 703 54.3
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 1.4e-205 720.3 623 59.7
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 3.2e-205 719.2 687 55.5
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 2.7e-204 716.1 700 56.9
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.0e-203 714.1 688 54.1
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 1.3e-203 713.8 701 56.5
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 3.0e-203 712.6 701 56.6
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 3.9e-203 712.2 700 55.7
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.1e-202 710.7 600 60.7
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 1.9e-202 709.9 698 57.0
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 1.9e-202 709.9 700 56.3
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 3.3e-202 709.1 701 55.6
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 3.3e-202 709.1 678 54.6
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 4.3e-202 708.8 673 56.0
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 2.1e-201 706.4 714 52.9
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 2.8e-201 706.1 700 55.3
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 8.1e-201 704.5 731 53.1
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 2.1e-196 689.9 770 49.6
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 3.9e-195 685.6 691 53.3
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 8.7e-195 684.5 686 53.4
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 3.6e-193 679.1 652 54.4
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.9e-190 669.5 606 57.1
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 8.4e-190 667.9 691 54.7
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 5.6e-186 655.2 607 57.0
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.8e-182 642.5 630 55.7
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 8.4e-182 641.3 612 55.9
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 2.3e-179 633.3 700 52.3
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.3e-178 629.4 600 57.7
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 1.3e-177 627.5 704 48.7
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 5.5e-165 585.5 520 59.0
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.3e-145 521.2 422 64.9
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 9.4e-141 505.0 533 54.2
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 2.0e-138 497.3 640 46.7
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 3.1e-136 490.0 491 54.4
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 2.3e-126 457.2 703 43.2
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 2.9e-126 456.8 424 58.0
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 1.9e-117 427.6 743 36.5
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 2.2e-113 414.1 771 35.3
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 6.6e-110 402.5 718 35.2
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 3.6e-92 343.6 337 53.1
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 1.6e-87 328.2 524 38.7
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.8e-83 314.7 330 50.9
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 3.0e-70 270.8 306 53.3
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.5e-69 267.7 240 58.3
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 1.6e-55 221.9 253 49.0
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 1.8e-54 218.4 287 46.0
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 2.2e-49 201.4 263 45.6
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 7.4e-45 186.4 417 31.2
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 4.4e-37 160.6 160 51.2
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 5.5e-32 143.7 678 25.5
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 6.1e-31 140.2 155 47.7
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 1.4e-27 129.0 121 55.4
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 1.1e-19 102.8 75 62.7
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 7.7e-18 96.7 319 27.6
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 4.0e-14 84.3 63 71.4
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 5.7e-13 80.5 131 36.6
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 6.3e-12 77.0 97 45.4
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 4.3e-08 64.3 52 63.5
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 1.8e-06 58.9 65 50.8


User provided reference genes

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