Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6303 Papaver somniferum HOM05D007619 ORTHO05D009522 7.4e-181 637.1 330 100.0
PSO675G7165 Papaver somniferum HOM05D007619 ORTHO05D009522 1.4e-142 510.0 284 95.1
TAR633G2353 Trochodendron aralioides HOM05D007619 ORTHO05D009522 2.0e-93 346.7 332 59.6
Aqoxy2G03954 Aquilegia oxysepala HOM05D007619 ORTHO05D009522 6.9e-86 321.6 325 55.1
Nn7g37654 Nelumbo nucifera HOM05D007619 ORTHO05D009522 9.0e-86 321.2 334 57.2
MBI11_g04278_MAGBIO Magnolia biondii HOM05D007619 ORTHO05D009522 4.5e-85 318.9 320 56.9
Thecc.05G206200 Theobroma cacao HOM05D007619 ORTHO05D009522 9.1e-78 294.7 327 52.3
GSVIVG01019143001 Vitis vinifera HOM05D007619 ORTHO05D009522 2.6e-77 293.1 312 53.8
RcHm_v2.0_Chr3g0448201 Rosa chinensis HOM05D007619 ORTHO05D009522 7.7e-77 291.6 321 52.3
Psat4g220960 Pisum sativum HOM05D007619 ORTHO05D009522 6.5e-76 288.5 314 53.2
Ciclev10012185m.g Citrus clementina HOM05D007619 ORTHO05D009522 1.2e-74 284.3 306 54.2
TPR.G14653 Trifolium pratense HOM05D007619 ORTHO05D009522 3.6e-74 282.7 319 51.7
Ca_09970_v3 Cicer arietinum L. HOM05D007619 ORTHO05D009522 6.1e-74 282.0 318 51.6
Glyma.10G170300 Glycine max HOM05D007619 ORTHO05D009522 1.0e-73 281.2 316 51.9
Gorai.004G260400 Gossypium raimondii HOM05D007619 ORTHO05D009522 3.9e-73 279.3 327 49.8
Phvul.010G077712 Phaseolus vulgaris HOM05D007619 ORTHO05D009522 6.7e-73 278.5 314 51.9
Atru.chr12.2107 Acer truncatum HOM05D007619 ORTHO05D009522 8.8e-73 278.1 319 50.8
Glyma.20G219700 Glycine max HOM05D007619 ORTHO05D009522 1.1e-72 277.7 334 50.9
Eucgr.C02023 Eucalyptus grandis HOM05D007619 ORTHO05D009522 2.0e-72 276.9 313 51.4
MD04G1241800 Malus domestica HOM05D007619 ORTHO05D009522 2.0e-72 276.9 328 52.4
Gohir.1Z049672 Gossypium hirsutum HOM05D007619 ORTHO05D009522 2.6e-72 276.6 312 51.6
Gohir.D08G244101 Gossypium hirsutum HOM05D007619 ORTHO05D009522 2.6e-72 276.6 312 51.6
Hma1.2p1_0220F.1_g093010 Hydrangea macrophylla HOM05D007619 ORTHO05D009522 2.6e-72 276.6 313 51.8
Manes.09G184300 Manihot esculenta HOM05D007619 ORTHO05D009522 4.4e-72 275.8 323 50.8
Lalb_Chr21g0311391 Lupinus albus HOM05D007619 ORTHO05D009522 5.7e-72 275.4 304 52.0
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 9.7e-72 274.6 299 52.5
Lalb_Chr02g0149381 Lupinus albus HOM05D007619 ORTHO05D009522 1.1e-70 271.2 304 52.6
arahy.Tifrunner.gnm1.ann1.P2W93U Arachis hypogaea HOM05D007619 ORTHO05D009522 5.3e-70 268.9 308 53.9
Lsat_1_v5_gn_2_17180 Lactuca sativa HOM05D007619 ORTHO05D009522 7.0e-70 268.5 308 51.3
Medtr1g078380 Medicago truncatula HOM05D007619 ORTHO05D009522 4.5e-69 265.8 311 51.4
VMungo0720G2770 Vigna mungo HOM05D007619 ORTHO05D009522 1.0e-68 264.6 333 48.6
arahy.Tifrunner.gnm1.ann1.YK6SIT Arachis hypogaea HOM05D007619 ORTHO05D009522 1.3e-68 264.2 308 52.6
TPR.G14659 Trifolium pratense HOM05D007619 ORTHO05D009522 2.2e-68 263.5 314 49.7
EL10Ac4g09950 Beta vulgaris HOM05D007619 ORTHO05D009522 4.2e-67 259.2 322 46.6
Solyc05g055830.3 Solanum lycopersicum HOM05D007619 ORTHO05D009522 4.2e-67 259.2 308 47.1
Cfa006282 Carpinus fangiana HOM05D007619 ORTHO05D009522 5.5e-67 258.8 334 47.3
FAN09G3963 Fragaria x ananassa HOM05D007619 ORTHO05D009522 5.5e-67 258.8 388 42.8
Sopen05g034230 Solanum pennellii HOM05D007619 ORTHO05D009522 9.4e-67 258.1 308 46.8
PGSC0003DMG400023471 Solanum tuberosum HOM05D007619 ORTHO05D009522 1.2e-66 257.7 308 47.4
ClCG11G010990 Citrullus lanatus HOM05D007619 ORTHO05D009522 4.7e-66 255.8 305 48.9
Peaxi162Scf00156g00417 Petunia axillaris HOM05D007619 ORTHO05D009522 1.8e-65 253.8 308 48.1
Sc09g0001560 Simmondsia chinensis HOM05D007619 ORTHO05D009522 1.8e-65 253.8 317 48.6
FAN14G0392 Fragaria x ananassa HOM05D007619 ORTHO05D009522 5.2e-65 252.3 370 44.3
Haze_04528 Corylus avellana HOM05D007619 ORTHO05D009522 6.7e-65 251.9 324 48.1
CDE04G2379 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 1.5e-64 250.8 332 48.8
FAN05G3312 Fragaria x ananassa HOM05D007619 ORTHO05D009522 2.6e-64 250.0 399 41.6
HanXRQChr07g0190091 Helianthus annuus HOM05D007619 ORTHO05D009522 2.8e-63 246.5 321 47.4
Hund27507 Selenicereus undatus HOM05D007619 ORTHO05D009522 1.1e-62 244.6 324 46.3
Ah.06g195590 Amaranthus hybridus HOM05D000031 ORTHO05D000030 1.4e-62 244.2 311 46.3
MELO3C008758.2 Cucumis melo HOM05D007619 ORTHO05D009522 2.4e-62 243.4 307 46.9
Cc09_g03420 Coffea canephora HOM05D007619 ORTHO05D009522 9.1e-62 241.5 331 45.0
Potri.013G087300 Populus trichocarpa HOM05D007619 ORTHO05D009522 2.0e-61 240.4 306 48.0
CAN.G694.14 Capsicum annuum HOM05D007619 ORTHO05D009522 3.5e-61 239.6 305 45.2
vmacro10399 Vaccinium macrocarpon HOM05D007619 ORTHO05D009522 4.5e-61 239.2 326 44.8
CsaV3_2G009500 Cucumis sativus L. HOM05D007619 ORTHO05D009522 5.9e-61 238.8 305 48.2
AUR62000347 Chenopodium quinoa HOM05D000031 ORTHO05D009522 7.7e-61 238.4 329 43.8
CDE07G1839 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 1.3e-60 237.7 187 64.2
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.7e-60 237.3 300 45.3
MSTRG.27407 Avicennia marina HOM05D007619 ORTHO05D009522 5.5e-59 232.3 327 43.7
SGA_v2.0_scaffold340G49291 Striga asiatica HOM05D007619 ORTHO05D009522 2.7e-58 229.9 305 46.2
Duzib128G0301 Durio zibethinus HOM05D007619 ORTHO05D009522 1.0e-57 228.0 292 46.2
Migut.F01883 Erythranthe guttata HOM05D007619 ORTHO05D009522 4.0e-57 226.1 308 45.1
Hund21888 Selenicereus undatus HOM05D007619 ORTHO05D009522 3.4e-56 223.0 282 47.9
FAN02G4130 Fragaria x ananassa HOM05D007619 ORTHO05D009522 4.4e-56 222.6 325 42.2
Gohir.A08G223800 Gossypium hirsutum HOM05D007619 ORTHO05D009522 7.5e-56 221.9 237 53.2
Lj5g0000048 Lotus japonicus HOM05D007619 ORTHO05D009522 2.4e-54 216.9 272 48.5
CiPaw.08G116400 Carya illinoinensis HOM05D007619 ORTHO05D009522 2.0e-53 213.8 278 46.0
Prupe.6G359200 Prunus persica HOM05D007619 ORTHO05D009522 5.0e-52 209.1 259 51.0
HPP92_024640 Vanilla planifolia HOM05D001334 ORTHO05D001119 2.5e-51 206.8 298 41.3
Actinidia34778 Actinidia chinensis HOM05D007619 ORTHO05D009522 1.0e-49 201.4 185 57.3
Sed0001247 Sechium edule HOM05D007619 ORTHO05D009522 6.8e-49 198.7 264 46.6
Nitab4.5_0009285g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 1.2e-48 198.0 300 43.0
Nitab4.5_0005183g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 3.4e-48 196.4 297 41.8
AUR62006691 Chenopodium quinoa HOM05D007619 ORTHO05D009522 2.8e-47 193.4 333 39.6
Os01g0100600 Oryza sativa ssp. japonica HOM05D007619 ORTHO05D009522 1.1e-46 191.4 355 37.2
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 1.2e-45 188.0 374 36.9
Zm00001eb394570 Zea mays HOM05D007619 ORTHO05D009522 4.5e-45 186.0 364 38.2
Oeu010149.1 Olea europaea HOM05D007619 ORTHO05D009522 9.5e-43 178.3 278 42.8
Zm00001eb017060 Zea mays HOM05D007619 ORTHO05D009522 9.5e-43 178.3 357 35.9
Mapoly0093s0084 Marchantia polymorpha HOM05D007619 ORTHO05D009522 1.8e-41 174.1 188 53.2
SalBow6G3661 Salvia bowleyana HOM05D007619 ORTHO05D009522 3.4e-40 169.9 308 39.6
Dinv29118 Davidia involucrata HOM05D007619 ORTHO05D009522 6.3e-39 165.6 275 41.8
Pp3c8_1020 Physcomitrium patens HOM05D007619 ORTHO05D009522 1.4e-38 164.5 184 52.7
AagrBONN_evm.TU.Sc2ySwM_117.3969 Anthoceros agrestis HOM05D007619 ORTHO05D009522 1.8e-33 147.5 262 39.3
SEGI_00786 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 1.8e-33 147.5 121 61.2
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-31 141.0 95 69.5
Sabra18G0055400 Salix brachista HOM05D007619 ORTHO05D009522 2.2e-31 140.6 93 72.0
Oeu040489.1 Olea europaea HOM05D007619 ORTHO05D009522 3.0e-28 130.2 96 63.5
MD12G1258700 Malus domestica HOM05D007619 ORTHO05D009522 4.3e-27 126.3 83 69.9
SHI13735 Sapria himalayana HOM05D007619 ORTHO05D009522 3.7e-23 113.2 291 33.3
SMO230G0088 Selaginella moellendorffii HOM05D007619 ORTHO05D009522 8.3e-23 112.1 192 39.6
Actinidia38907 Actinidia chinensis HOM05D003215 ORTHO05D003735 3.5e-21 106.7 128 48.4
Cpa.g.sc1371.1 Carica papaya HOM05D007619 ORTHO05D009522 5.6e-19 99.4 196 38.3
MD12G1258600 Malus domestica HOM05D007619 ORTHO05D009522 1.4e-17 94.7 184 39.7
ATR0609G094 Amborella trichopoda HOM05D007619 ORTHO05D009522 5.8e-16 89.4 189 38.6
Cpa.g.c37388 Carica papaya HOM05D007619 ORTHO05D009522 1.7e-15 87.8 50 78.0
Sabra18G0055300 Salix brachista HOM05D007619 ORTHO05D009522 3.9e-12 76.6 177 35.0
FvH4_6g00730 Fragaria vesca HOM05D007619 ORTHO05D009522 1.1e-09 68.6 41 78.0
SEGI_37386 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 2.6e-08 63.9 212 28.3


User provided reference genes

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