Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 0.0e+00 1152.1 558 100.0
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 0.0e+00 1127.9 558 97.1
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 1.6e-228 796.2 572 68.4
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 1.7e-222 776.2 561 69.0
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 2.6e-218 762.3 556 68.0
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 4.7e-212 741.5 567 65.8
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 7.1e-208 727.6 573 64.2
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 1.2e-207 726.9 550 64.5
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 2.3e-206 722.6 537 67.6
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 2.3e-206 722.6 589 63.2
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 3.9e-206 721.8 550 64.7
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 3.9e-206 721.8 557 64.6
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 6.6e-206 721.1 557 64.3
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 1.9e-205 719.5 576 63.2
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 9.6e-205 717.2 546 65.2
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.6e-204 716.5 562 64.4
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 1.6e-204 716.5 565 63.5
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.1e-204 716.1 557 64.8
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 4.8e-204 714.9 559 63.9
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 4.0e-203 711.8 538 64.9
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 5.3e-203 711.4 557 64.5
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 6.9e-203 711.1 550 64.2
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 1.2e-202 710.3 551 62.8
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 2.0e-202 709.5 572 63.3
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 2.6e-202 709.1 547 63.4
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 2.6e-202 709.1 489 69.5
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 4.4e-202 708.4 549 65.2
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 7.6e-202 707.6 561 64.9
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 3.8e-201 705.3 546 64.8
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 8.4e-201 704.1 550 62.9
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 1.4e-200 703.4 552 62.9
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 5.4e-200 701.4 576 62.3
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 7.1e-200 701.0 556 62.1
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 6.0e-199 698.0 570 61.2
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 1.3e-198 696.8 507 68.2
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 2.3e-198 696.0 555 62.9
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 5.1e-198 694.9 553 63.1
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 5.1e-198 694.9 513 66.5
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 5.6e-197 691.4 555 62.5
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 7.3e-197 691.0 470 73.0
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.1e-196 689.5 555 62.9
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 2.8e-196 689.1 564 60.6
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 2.8e-196 689.1 596 59.6
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 3.6e-196 688.7 540 61.9
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 3.6e-196 688.7 553 62.6
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 4.8e-196 688.3 590 58.5
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 1.4e-195 686.8 636 57.4
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.8e-195 686.4 583 59.3
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 1.8e-195 686.4 548 61.3
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 5.3e-195 684.9 547 63.1
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 9.0e-195 684.1 548 62.6
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 2.0e-194 682.9 482 67.6
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 4.5e-194 681.8 550 61.6
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 4.5e-194 681.8 556 59.7
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 1.7e-193 679.9 543 62.6
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 1.9e-192 676.4 567 59.3
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 2.7e-191 672.5 559 60.5
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 1.3e-190 670.2 556 60.4
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 5.1e-190 668.3 552 60.7
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 1.5e-189 666.8 550 60.0
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 1.5e-189 666.8 554 60.1
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 4.3e-189 665.2 572 59.3
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 9.6e-189 664.1 545 60.4
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 1.3e-188 663.7 553 60.0
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 2.1e-188 662.9 550 60.4
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 1.1e-187 660.6 547 59.8
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 2.4e-187 659.4 547 59.2
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 4.0e-187 658.7 584 58.9
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 6.9e-187 657.9 574 58.5
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 1.5e-186 656.8 549 59.7
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.6e-186 656.0 496 66.3
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 7.6e-186 654.4 566 59.0
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 6.5e-185 651.4 536 62.1
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 1.4e-184 650.2 573 57.8
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 1.4e-184 650.2 537 60.7
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 5.5e-184 648.3 539 59.7
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.2e-183 647.1 547 59.2
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 2.7e-183 646.0 616 55.0
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 3.0e-182 642.5 560 58.0
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 3.9e-182 642.1 492 63.2
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 1.1e-181 640.6 481 64.2
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 9.6e-181 637.5 550 59.3
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 1.6e-180 636.7 512 62.1
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 3.7e-180 635.6 550 59.3
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 8.2e-180 634.4 520 61.3
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 5.3e-179 631.7 539 58.8
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 6.9e-179 631.3 310 96.5
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 1.2e-178 630.6 549 58.3
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 1.5e-173 613.6 562 56.0
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 1.8e-171 606.7 549 55.9
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 1.2e-170 604.0 572 54.0
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 2.5e-160 569.7 389 68.1
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.3e-157 559.3 451 63.0
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 6.3e-156 555.1 439 62.9
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 2.6e-154 549.7 394 67.8
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 1.2e-151 540.8 369 71.0
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 6.1e-151 538.5 556 52.0
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 2.8e-148 529.6 545 53.4
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 1.3e-145 520.8 574 48.8
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 1.3e-145 520.8 435 60.5
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 8.5e-145 518.1 387 62.5
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 9.1e-139 498.0 346 67.9
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 2.2e-137 493.4 602 47.5
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 3.6e-135 486.1 332 68.4
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 6.1e-135 485.3 350 65.7
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 2.3e-134 483.4 333 68.2
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 2.0e-130 470.3 347 66.6
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 1.6e-127 460.7 546 49.3
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 2.8e-127 459.9 458 53.9
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.5e-125 454.1 347 62.5
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 4.1e-123 446.0 439 48.7
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 5.9e-122 442.2 531 47.5
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 1.3e-121 441.0 501 44.1
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 3.1e-118 429.9 376 58.5
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 3.4e-117 426.4 323 63.8
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 5.8e-117 425.6 498 45.4
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 3.1e-110 403.3 300 63.0
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 6.8e-110 402.1 300 62.7
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 8.1e-103 378.6 255 72.2
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.8e-102 377.5 267 68.9
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 3.3e-96 356.7 255 65.1
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 8.1e-79 298.9 211 66.4
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 3.4e-77 293.5 503 34.0
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 7.6e-77 292.4 207 67.6
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 3.1e-70 270.4 254 56.7
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.5e-61 241.5 162 68.5
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 2.9e-60 237.3 146 75.3
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 5.5e-59 233.0 222 53.2
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.6e-55 221.5 156 67.9
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.5e-53 214.9 136 74.3
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 5.3e-38 163.3 205 46.3
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 9.1e-38 162.5 165 46.1
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 3.2e-35 154.1 159 56.0
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 1.4e-33 148.7 157 55.4
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.4e-33 148.7 174 50.6
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 7.5e-32 142.9 122 55.7
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 2.2e-31 141.4 160 53.8
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 8.2e-31 139.4 140 54.3
Actinidia25550 Actinidia chinensis HOM05D005105 ORTHO05D006244 9.1e-30 136.0 150 45.3
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 5.0e-28 130.2 123 57.7
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 2.1e-26 124.8 89 67.4
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 1.2e-24 119.0 84 69.0
HPP92_009880 Vanilla planifolia HOM05D005105 ORTHO05D006244 7.5e-16 89.7 72 55.6
SEGI_15377 Sequoiadendron giganteum HOM05D005105 ORTHO05D006244 2.3e-09 68.2 72 45.8
CSS0040735 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 9.8e-08 62.8 107 43.9


User provided reference genes

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