Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6070 Papaver somniferum HOM05D005950 ORTHO05D008673 1.4e-162 576.2 301 100.0
PSO478G4484 Papaver somniferum HOM05D005950 ORTHO05D008673 1.9e-143 512.7 292 92.1
Aqoxy5G03108 Aquilegia oxysepala HOM05D005950 ORTHO05D008673 4.4e-103 378.6 288 70.8
Dinv03756 Davidia involucrata HOM05D005950 ORTHO05D008673 1.8e-101 373.2 245 73.1
TAR629G3081 Trochodendron aralioides HOM05D005950 ORTHO05D008673 1.5e-100 370.2 287 68.3
TAR371G0811 Trochodendron aralioides HOM05D005950 ORTHO05D008673 7.7e-100 367.9 272 70.6
MD13G1130900 Malus domestica HOM05D005950 ORTHO05D008673 1.0e-99 367.5 299 64.9
CSS0009236 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 3.8e-99 365.5 270 69.3
CSS0041196 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 3.8e-99 365.5 270 69.3
MBI10_g32324_MAGBIO Magnolia biondii HOM05D005950 ORTHO05D008673 5.0e-99 365.2 225 78.7
Prupe.1G214800 Prunus persica HOM05D005950 ORTHO05D008673 1.1e-98 364.0 285 66.7
QL03p049137 Quercus lobata HOM05D005950 ORTHO05D008673 1.4e-98 363.6 302 62.6
HanXRQChr06g0175111 Helianthus annuus HOM05D005950 ORTHO05D008673 5.5e-98 361.7 277 69.0
CiPaw.05G101200 Carya illinoinensis HOM05D005950 ORTHO05D008673 7.2e-98 361.3 302 65.2
Manes.08G101200 Manihot esculenta HOM05D005950 ORTHO05D008673 9.4e-98 360.9 273 68.5
GSVIVG01001090001 Vitis vinifera HOM05D005950 ORTHO05D008673 2.1e-97 359.8 259 70.7
MELO3C022359.2 Cucumis melo HOM05D005950 ORTHO05D008673 2.7e-97 359.4 277 69.7
Eucgr.B03560 Eucalyptus grandis HOM05D005950 ORTHO05D008673 3.6e-97 359.0 249 70.3
Atru.chr12.1419 Acer truncatum HOM05D005950 ORTHO05D008673 1.4e-96 357.1 249 71.1
FvH4_4g22640 Fragaria vesca HOM05D005950 ORTHO05D008673 1.4e-96 357.1 282 67.0
Lsat_1_v5_gn_3_32320 Lactuca sativa HOM05D005950 ORTHO05D008673 1.4e-96 357.1 224 76.8
Hund27394 Selenicereus undatus HOM05D005950 ORTHO05D008673 1.8e-96 356.7 255 68.6
CsaV3_6G007730 Cucumis sativus L. HOM05D005950 ORTHO05D008673 2.3e-96 356.3 288 67.0
RcHm_v2.0_Chr4g0428871 Rosa chinensis HOM05D005950 ORTHO05D008673 2.3e-96 356.3 262 70.2
Haze_12503 Corylus avellana HOM05D005950 ORTHO05D008673 3.0e-96 355.9 261 69.0
Thecc.02G192100 Theobroma cacao HOM05D005950 ORTHO05D008673 3.0e-96 355.9 282 63.8
Ciclev10005525m.g Citrus clementina HOM05D005950 ORTHO05D008673 3.9e-96 355.5 243 72.8
DCAR_024633 Daucus carota HOM05D000512 ORTHO05D008673 3.9e-96 355.5 238 72.3
Potri.001G100300 Populus trichocarpa HOM05D005950 ORTHO05D008673 5.2e-96 355.1 259 68.0
FAN12G2095 Fragaria x ananassa HOM05D005950 ORTHO05D008673 6.7e-96 354.8 282 66.3
Hma1.2p1_0660F.1_g197630 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 1.1e-95 354.0 234 72.6
Sed0005763 Sechium edule HOM05D005950 ORTHO05D008673 2.6e-95 352.8 284 65.1
Gorai.002G021400 Gossypium raimondii HOM05D005950 ORTHO05D008673 4.4e-95 352.1 250 66.8
PGR102G2360 Punica granatum HOM05D005950 ORTHO05D008673 4.4e-95 352.1 300 62.7
Duzib248G1270 Durio zibethinus HOM05D005950 ORTHO05D008673 7.4e-95 351.3 247 68.8
FAN17G1731 Fragaria x ananassa HOM05D005950 ORTHO05D008673 7.4e-95 351.3 276 66.3
FAN07G2488 Fragaria x ananassa HOM05D005950 ORTHO05D008673 9.7e-95 350.9 287 64.8
Aa31sc45G70 Aethionema arabicum HOM05D005950 ORTHO05D008673 4.8e-94 348.6 271 65.7
TWI36G0089 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 4.8e-94 348.6 294 62.9
Gohir.A01G020600 Gossypium hirsutum HOM05D005950 ORTHO05D008673 8.2e-94 347.8 250 66.4
RhsimUnG0153300 Rhododendron simsii HOM05D005950 ORTHO05D008673 9.1e-93 344.4 283 62.9
Rhsim12G0072500 Rhododendron simsii HOM05D005950 ORTHO05D008673 1.2e-92 344.0 283 62.9
Lalb_Chr06g0164721 Lupinus albus HOM05D005950 ORTHO05D008673 1.6e-92 343.6 229 72.1
BcaC05g26819 Brassica carinata HOM05D005950 ORTHO05D008673 2.0e-92 343.2 271 66.1
Ah.03g135560 Amaranthus hybridus HOM05D005950 ORTHO05D008673 2.6e-92 342.8 242 69.0
BcaB07g32425 Brassica carinata HOM05D005950 ORTHO05D008673 2.6e-92 342.8 271 65.3
Cpa.g.sc182.2 Carica papaya HOM05D005950 ORTHO05D008673 4.5e-92 342.0 247 69.2
Carub.0001s2657 Capsella rubella HOM05D005950 ORTHO05D008673 5.9e-92 341.7 235 70.2
AUR62005715 Chenopodium quinoa HOM05D005950 ORTHO05D008673 7.7e-92 341.3 261 65.1
COL.COLO4_36001 Corchorus olitorius HOM05D005950 ORTHO05D008673 1.0e-91 340.9 293 61.4
Nitab4.5_0006153g0020 Nicotiana tabacum HOM05D005950 ORTHO05D008673 2.2e-91 339.7 250 66.0
Phvul.007G000300 Phaseolus vulgaris HOM05D005950 ORTHO05D008673 2.2e-91 339.7 253 68.0
EL10Ac6g13611 Beta vulgaris HOM05D005950 ORTHO05D008673 2.9e-91 339.3 259 65.6
BolC5t31407H Brassica oleracea HOM05D005950 ORTHO05D008673 2.9e-91 339.3 289 63.0
AL1G41670 Arabidopsis lyrata HOM05D005950 ORTHO05D008673 6.5e-91 338.2 235 69.8
AT1G28140 Arabidopsis thaliana HOM05D005950 ORTHO05D008673 6.5e-91 338.2 235 69.8
A09p37910 Brassica napus HOM05D005950 ORTHO05D008673 1.1e-90 337.4 272 65.4
Peaxi162Scf00023g00931 Petunia axillaris HOM05D005950 ORTHO05D008673 1.1e-90 337.4 277 59.9
Actinidia33998 Actinidia chinensis HOM05D005950 ORTHO05D008673 2.5e-90 336.3 241 69.3
BraA09t39303Z Brassica rapa HOM05D005950 ORTHO05D008673 2.5e-90 336.3 272 65.1
SalBow2G0445 Salvia bowleyana HOM05D005950 ORTHO05D008673 2.5e-90 336.3 284 62.3
ATR0582G132 Amborella trichopoda HOM05D005950 ORTHO05D008673 3.2e-90 335.9 244 65.6
CARHR027610 Cardamine hirsuta HOM05D005950 ORTHO05D008673 3.2e-90 335.9 274 63.9
PGSC0003DMG400028387 Solanum tuberosum HOM05D005950 ORTHO05D008673 4.2e-90 335.5 225 68.4
VMungo0720G2460 Vigna mungo HOM05D005950 ORTHO05D008673 4.2e-90 335.5 241 69.7
CDE02G3863 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 7.2e-90 334.7 215 74.4
Thhalv10008446m.g Eutrema salsugineum HOM05D005950 ORTHO05D008673 1.2e-89 334.0 267 63.3
Solyc05g012700.3 Solanum lycopersicum HOM05D005950 ORTHO05D008673 1.2e-89 334.0 229 66.4
Oeu027106.1 Olea europaea HOM05D005950 ORTHO05D008673 1.6e-89 333.6 250 65.6
Sp1g24330 Schrenkiella parvula HOM05D005950 ORTHO05D008673 2.1e-89 333.2 271 64.2
CAN.G624.24 Capsicum annuum HOM05D005950 ORTHO05D008673 2.7e-89 332.8 292 59.9
Sopen05g007530 Solanum pennellii HOM05D005950 ORTHO05D008673 2.7e-89 332.8 229 65.9
LjContig00470g0001843 Lotus japonicus HOM05D005950 ORTHO05D008673 3.6e-89 332.4 269 65.1
C05p26890 Brassica napus HOM05D005950 ORTHO05D008673 4.7e-89 332.0 287 61.7
THA.LOC104820536 Tarenaya hassleriana HOM05D005950 ORTHO05D008673 4.7e-89 332.0 230 70.4
vmacro16072 Vaccinium macrocarpon HOM05D005950 ORTHO05D008673 4.7e-89 332.0 326 56.7
Sabra01G0075200 Salix brachista HOM05D005950 ORTHO05D008673 1.4e-88 330.5 293 59.0
arahy.Tifrunner.gnm1.ann1.MTDN4F Arachis hypogaea HOM05D005950 ORTHO05D008673 1.8e-88 330.1 260 65.4
Nitab4.5_0000208g0380 Nicotiana tabacum HOM05D005950 ORTHO05D008673 1.8e-88 330.1 247 65.2
Migut.K01055 Erythranthe guttata HOM05D005950 ORTHO05D008673 2.3e-88 329.7 289 62.3
TPR.G7754 Trifolium pratense HOM05D005950 ORTHO05D008673 2.3e-88 329.7 243 69.5
Cc11_g15000 Coffea canephora HOM05D005950 ORTHO05D008673 3.0e-88 329.3 299 58.9
Medtr1g099520 Medicago truncatula HOM05D005950 ORTHO05D008673 4.0e-88 328.9 246 67.1
Sc19g0003090 Simmondsia chinensis HOM05D005950 ORTHO05D008673 5.2e-88 328.6 306 56.5
MSTRG.8054 Avicennia marina HOM05D005950 ORTHO05D008673 6.7e-88 328.2 275 61.5
CANSAT01G2759 Cannabis sativa HOM05D005950 ORTHO05D008673 4.4e-87 325.5 238 68.1
HPP92_007045 Vanilla planifolia HOM05D005950 ORTHO05D008673 2.4e-85 319.7 298 56.4
Os03g0850600 Oryza sativa ssp. japonica HOM05D005950 ORTHO05D008673 3.1e-85 319.3 225 68.4
SGA_v2.0_scaffold157G37356 Striga asiatica HOM05D005950 ORTHO05D008673 1.3e-83 313.9 280 61.1
Mapoly0027s0093 Marchantia polymorpha HOM05D005950 ORTHO05D008673 1.1e-82 310.8 237 64.6
Zm00001eb064540 Zea mays HOM05D005950 ORTHO05D008673 2.1e-81 306.6 224 67.0
Ca_10708_v3 Cicer arietinum L. HOM05D005950 ORTHO05D008673 1.4e-80 303.9 204 74.5
ClCG06G001700 Citrullus lanatus HOM05D005950 ORTHO05D008673 1.4e-80 303.9 272 63.2
Pp3c8_12800 Physcomitrium patens HOM05D005950 ORTHO05D008673 5.2e-80 302.0 297 54.9
SMO367G1143 Selaginella moellendorffii HOM05D005950 ORTHO05D008673 1.3e-78 297.4 286 53.8
Psat6g195320 Pisum sativum HOM05D005950 ORTHO05D008673 4.8e-78 295.4 224 68.3
unitig_747.g21110 Utricularia gibba HOM05D005950 ORTHO05D008673 7.0e-77 291.6 265 57.4
Lj3A1077T57 Lonicera japonica HOM05D005950 ORTHO05D008673 1.6e-76 290.4 200 72.5
SEGI_01129 Sequoiadendron giganteum HOM05D005950 ORTHO05D008673 1.6e-76 290.4 204 67.6
Glyma.20G249800 Glycine max HOM05D005950 ORTHO05D008673 5.9e-76 288.5 224 66.5
AagrBONN_evm.TU.Sc2ySwM_344.2741 Anthoceros agrestis HOM05D005950 ORTHO05D008673 1.1e-74 284.3 286 53.8
Duzib052G0358 Durio zibethinus HOM05D005950 ORTHO05D008673 1.9e-74 283.5 233 62.7
CBR_g3659 Chara braunii HOM05D005950 ORTHO05D008673 2.5e-74 283.1 240 59.2
arahy.Tifrunner.gnm1.ann1.PXY63F Arachis hypogaea HOM05D005950 ORTHO05D008673 1.4e-69 267.3 260 56.2
AUR62028840 Chenopodium quinoa HOM05D005950 ORTHO05D008673 3.5e-68 262.7 206 64.6
Hma1.2p1_0660F.1_g197620 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 1.9e-66 256.9 184 68.5
Nn3g16271 Nelumbo nucifera HOM05D005950 ORTHO05D008673 1.7e-59 233.8 295 47.8
CDE06G2125 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 8.9e-56 221.5 137 75.9
MCO02G210 Micromonas commoda HOM05D005950 ORTHO05D008673 1.4e-48 197.6 216 50.0
Cre04.g228450 Chlamydomonas reinhardtii HOM05D005950 ORTHO05D008673 1.1e-45 188.0 269 40.9
PRCOL_00003015 Prasinoderma coloniale HOM05D005950 ORTHO05D008673 2.1e-41 173.7 217 42.4
TWI18G1378 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 3.1e-40 169.9 147 60.5
Gohir.D01G019100 Gossypium hirsutum HOM05D005950 ORTHO05D008673 2.1e-33 147.1 120 57.5
TPR.G36353 Trifolium pratense HOM05D005950 ORTHO05D008673 9.3e-29 131.7 84 76.2
Peaxi162Scf00040g00101 Petunia axillaris HOM05D005950 ORTHO05D008673 7.8e-28 128.6 137 50.4
Zm00001eb422050 Zea mays HOM05D005950 ORTHO05D008673 2.1e-20 104.0 82 63.4
MD16G1141000 Malus domestica HOM05D005950 ORTHO05D020170 1.5e-18 97.8 69 69.6
Zm00001eb141620 Zea mays HOM05D005950 ORTHO05D444810 1.9e-18 97.4 68 67.6
Hma1.2p1_0660F.1_g197640 Hydrangea macrophylla HOM05D005950 ORTHO05D020170 7.4e-18 95.5 56 78.6
FAN25G3256 Fragaria x ananassa HOM05D005950 ORTHO05D203075 3.7e-17 93.2 109 52.3
Peaxi162Scf00003g00713 Petunia axillaris HOM05D005950 ORTHO05D305722 9.9e-15 85.1 136 39.0
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 9.9e-15 85.1 63 65.1
FAN20G0916 Fragaria x ananassa HOM05D005950 ORTHO05D020170 1.3e-14 84.7 64 65.6
Peaxi162Scf00059g01815 Petunia axillaris HOM05D005950 ORTHO05D306406 6.4e-14 82.4 170 36.5
CDE06G1299 Ceratophyllum demersum HOM05D005950 ORTHO05D130736 4.2e-13 79.7 74 56.8
C05p26860 Brassica napus HOM05D005950 ORTHO05D020170 1.3e-11 74.7 51 70.6
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 1.1e-10 71.6 64 57.8
BolC5t31405H Brassica oleracea HOM05D005950 ORTHO05D020170 1.5e-10 71.2 65 60.0
Glyma.10G298600 Glycine max HOM05D005950 ORTHO05D020170 1.5e-10 71.2 45 75.6
A09p37930 Brassica napus HOM05D005950 ORTHO05D020170 2.1e-09 67.4 53 62.3
Peaxi162Scf00968g00313 Petunia axillaris HOM05D005950 ORTHO05D305879 1.1e-08 65.1 103 36.9
AL4G33820 Arabidopsis lyrata HOM05D005950 ORTHO05D080589 5.3e-08 62.8 84 41.7
Peaxi162Scf00141g00098 Petunia axillaris HOM05D005950 ORTHO05D306108 1.5e-07 61.2 43 60.5


User provided reference genes

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