Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-194 681.8 418 100.0
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-179 632.9 410 95.9
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 2.6e-77 293.5 400 51.0
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 7.0e-75 285.4 404 46.8
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.3e-70 270.4 402 40.8
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-67 260.0 398 45.2
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 1.7e-65 254.2 404 46.3
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 5.5e-64 249.2 322 57.8
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 4.7e-63 246.1 398 48.7
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 5.2e-62 242.7 408 45.3
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 1.3e-60 238.0 391 46.3
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 4.1e-59 233.0 395 37.5
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-56 223.4 405 43.7
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 2.8e-55 220.3 400 47.0
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 8.9e-54 215.3 401 45.9
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 8.9e-54 215.3 403 46.2
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 4.4e-53 213.0 313 53.4
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 4.4e-53 213.0 319 49.5
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 1.3e-52 211.5 400 43.2
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 4.9e-52 209.5 320 49.7
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 8.3e-52 208.8 319 47.3
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 8.3e-52 208.8 322 48.1
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 1.1e-51 208.4 363 47.4
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 4.1e-51 206.5 313 48.9
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 7.0e-51 205.7 312 54.2
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 3.5e-50 203.4 313 55.0
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 1.3e-49 201.4 411 41.6
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 1.3e-49 201.4 409 40.8
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 3.8e-49 199.9 313 47.9
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.1e-48 198.4 313 47.6
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 1.1e-48 198.4 313 47.6
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 4.3e-48 196.4 312 48.1
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 2.1e-47 194.1 316 46.5
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 4.7e-47 193.0 328 48.8
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 6.1e-47 192.6 323 53.9
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 2.3e-46 190.7 372 43.8
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 4.0e-46 189.9 315 46.3
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 4.0e-46 189.9 400 40.0
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 4.4e-45 186.4 322 44.7
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 1.3e-44 184.9 404 39.9
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 2.9e-44 183.7 313 44.7
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 4.9e-44 183.0 316 44.9
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 4.9e-44 183.0 403 39.2
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 1.1e-43 181.8 315 52.1
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 1.8e-43 181.0 316 49.4
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 1.8e-43 181.0 403 39.0
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 5.4e-43 179.5 348 37.4
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 1.2e-42 178.3 403 39.0
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 1.6e-42 177.9 316 48.7
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 2.0e-42 177.6 314 45.9
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 2.0e-42 177.6 410 38.8
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 3.5e-42 176.8 314 43.9
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 1.0e-41 175.3 312 44.6
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 1.0e-41 175.3 411 32.8
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 3.9e-41 173.3 313 36.4
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 3.9e-41 173.3 398 42.7
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 3.9e-41 173.3 313 44.4
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 1.1e-40 171.8 272 58.8
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 4.3e-40 169.9 318 48.7
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 3.6e-39 166.8 313 43.1
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 1.8e-38 164.5 311 48.6
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 2.3e-38 164.1 323 35.3
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 5.2e-38 162.9 302 52.0
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 1.3e-36 158.3 327 39.8
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 1.3e-36 158.3 347 52.2
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 1.7e-36 157.9 357 40.1
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 2.2e-36 157.5 337 40.4
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.9e-36 157.1 395 31.9
Duzib211G0440 Durio zibethinus HOM05D005998 ORTHO05D007664 1.1e-35 155.2 241 55.6
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 4.1e-35 153.3 389 36.2
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 6.0e-34 149.4 335 38.8
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 6.0e-34 149.4 332 38.9
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 7.3e-32 142.5 314 43.3
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 1.6e-31 141.4 301 44.2
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 2.1e-31 141.0 312 40.1
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 2.1e-31 141.0 312 40.1
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 3.4e-29 133.7 317 53.6
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 5.8e-29 132.9 263 43.3
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-28 131.7 334 38.0
Zm00001eb182340 Zea mays HOM05D005998 ORTHO05D015715 2.2e-28 131.0 181 42.0
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 3.7e-28 130.2 314 55.7
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 6.4e-28 129.4 317 53.0
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 8.3e-28 129.0 319 37.6
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 9.2e-27 125.6 171 40.4
ECA247G3549 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.7e-26 124.0 390 45.4
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.0e-25 120.6 407 34.2
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-25 120.6 332 35.5
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-25 120.6 332 35.5
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 5.1e-25 119.8 323 35.6
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 5.1e-25 119.8 323 35.6
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 1.1e-24 118.6 170 40.6
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 1.1e-24 118.6 167 41.3
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 1.5e-24 118.2 314 53.5
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 4.3e-24 116.7 314 53.5
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 4.3e-24 116.7 149 44.3
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 5.6e-24 116.3 344 29.7
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 7.3e-24 115.9 315 46.3
ECA247G1593 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.1e-23 114.4 179 38.0
PSO017G0278 Papaver somniferum HOM05D000500 ORTHO05D007664 2.8e-23 114.0 163 43.6
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 3.6e-23 113.6 337 28.2
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 6.2e-23 112.8 164 42.7
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 3.1e-22 110.5 102 53.9
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 8.9e-22 109.0 331 36.6
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 1.5e-21 108.2 295 43.4
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 2.0e-21 107.8 323 35.9
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 7.6e-21 105.9 265 39.2
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 2.9e-20 104.0 102 51.0
Duzib138G0171 Durio zibethinus HOM05D005998 ORTHO05D007664 3.8e-20 103.6 99 49.5
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 3.8e-20 103.6 438 41.1
Mapoly0166s0007 Marchantia polymorpha HOM05D005998 ORTHO05D007664 8.4e-20 102.4 307 41.4
Zm00001eb112540 Zea mays HOM05D005998 ORTHO05D007664 1.9e-19 101.3 312 48.4
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-18 98.6 263 47.5
ECA247G2923 Erigeron canadensis HOM05D005998 ORTHO05D003386 6.0e-18 96.3 292 49.3
Zm00001eb048880 Zea mays HOM05D005998 ORTHO05D015715 6.0e-18 96.3 109 46.8
ECA247G1907 Erigeron canadensis HOM05D005998 ORTHO05D007664 7.8e-18 95.9 116 43.1
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-14 85.5 148 39.9
Hma1.2p1_2354F.1_g320530 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 1.4e-14 85.1 84 50.0
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-14 84.7 140 37.9
MD10G1146000 Malus domestica HOM05D005998 ORTHO05D007664 2.4e-14 84.3 300 44.0
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-14 84.0 475 37.3
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 5.8e-13 79.7 165 35.2
PSO017G5922 Papaver somniferum HOM05D005998 ORTHO05D007664 4.9e-12 76.6 104 40.4
Potri.007G048101 Populus trichocarpa HOM05D001905 ORTHO05D001820 8.4e-12 75.9 155 35.5
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 1.9e-11 74.7 111 44.1
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 2.4e-11 74.3 144 38.9
PSO573G0035 Papaver somniferum HOM05D005998 ORTHO05D007664 2.4e-11 74.3 363 23.7
Eucgr.H00682 Eucalyptus grandis HOM05D005998 ORTHO05D007664 3.2e-11 73.9 103 37.9
Oeu064702.2 Olea europaea HOM05D005998 ORTHO05D007664 5.4e-11 73.2 113 36.3
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 9.3e-11 72.4 111 37.8
Dinv35926 Davidia involucrata HOM05D001905 ORTHO05D001820 6.0e-10 69.7 141 33.3
Actinidia08271 Actinidia chinensis HOM05D001905 ORTHO05D001820 7.8e-10 69.3 141 34.0
Medtr1g018790 Medicago truncatula HOM05D001905 ORTHO05D001820 2.3e-09 67.8 140 33.6
Oeu054785.1 Olea europaea HOM05D001905 ORTHO05D001820 5.1e-09 66.6 137 32.8
Oeu020232.1 Olea europaea HOM05D001905 ORTHO05D001820 1.5e-08 65.1 136 34.6
Actinidia38080 Actinidia chinensis HOM05D001905 ORTHO05D001820 3.3e-08 63.9 141 33.3
Duzib264G1203 Durio zibethinus HOM05D001905 ORTHO05D001820 3.3e-08 63.9 135 34.1
PSO837G0002 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-08 63.9 107 38.3
SalBow5G3486 Salvia bowleyana HOM05D001905 ORTHO05D001820 3.3e-08 63.9 135 32.6
Psat6g015040 Pisum sativum HOM05D001905 ORTHO05D001820 5.6e-08 63.2 143 30.8
Lj5g0027346 Lotus japonicus HOM05D001905 ORTHO05D001820 1.3e-07 62.0 137 31.4
Duzib147G0099 Durio zibethinus HOM05D001905 ORTHO05D001820 2.1e-07 61.2 135 33.3
EL10As7g23787 Beta vulgaris HOM05D001905 ORTHO05D001820 2.8e-07 60.8 125 32.8
Thecc.01G062700 Theobroma cacao HOM05D001905 ORTHO05D001820 2.8e-07 60.8 135 33.3
CSS0024135 Camellia sinensis var. sinensis HOM05D001905 ORTHO05D001820 6.2e-07 59.7 141 30.5
Duzib187G0856 Durio zibethinus HOM05D001905 ORTHO05D001820 6.2e-07 59.7 135 33.3
MD15G1288000 Malus domestica HOM05D001905 ORTHO05D001820 8.1e-07 59.3 135 32.6
PSO573G0016 Papaver somniferum HOM05D005998 ORTHO05D007664 8.1e-07 59.3 84 41.7
SalBow5G5277 Salvia bowleyana HOM05D001905 ORTHO05D001820 8.1e-07 59.3 135 31.9
CARHR036670 Cardamine hirsuta HOM05D001905 ORTHO05D001820 1.1e-06 58.9 153 28.1
ECA247G3818 Erigeron canadensis HOM05D001656 ORTHO05D005043 1.1e-06 58.9 120 30.0
Lalb_Chr14g0368481 Lupinus albus HOM05D001905 ORTHO05D001820 1.1e-06 58.9 138 30.4
Manes.05G177200 Manihot esculenta HOM05D001905 ORTHO05D001820 1.1e-06 58.9 137 30.7
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 1.4e-06 58.5 93 33.3
Ca_13256_v3 Cicer arietinum L. HOM05D001905 ORTHO05D001820 1.4e-06 58.5 140 30.7
Glyma.14G086000 Glycine max HOM05D001905 ORTHO05D001820 1.4e-06 58.5 137 29.9
SalBow7G4561 Salvia bowleyana HOM05D001905 ORTHO05D001820 1.4e-06 58.5 132 30.3
Phvul.001G024700 Phaseolus vulgaris HOM05D001905 ORTHO05D001820 2.4e-06 57.8 137 29.9
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 4.0e-06 57.0 94 34.0
Gorai.011G106600 Gossypium raimondii HOM05D001905 ORTHO05D001820 4.0e-06 57.0 162 28.4
Peaxi162Scf00769g00116 Petunia axillaris HOM05D002762 ORTHO05D004643 4.0e-06 57.0 110 34.5
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 6.9e-06 56.2 94 33.0


User provided reference genes

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