Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 1.1e-162 576.6 300 100.0
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 7.1e-154 547.4 303 94.7
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 1.6e-110 403.3 297 70.7
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 3.7e-110 402.1 296 71.3
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 5.9e-108 394.8 297 70.0
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 1.3e-107 393.7 297 68.7
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 5.5e-106 388.3 296 67.9
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 2.1e-105 386.3 296 69.6
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 1.1e-103 380.6 296 68.2
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 2.5e-103 379.4 297 67.0
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 3.3e-103 379.0 297 66.7
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 3.3e-103 379.0 300 68.0
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 5.7e-103 378.3 296 67.9
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 7.4e-103 377.9 297 66.7
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 1.3e-102 377.1 244 77.5
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 2.8e-102 375.9 298 67.8
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 8.2e-102 374.4 296 68.2
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 1.2e-100 370.5 296 66.2
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 2.0e-100 369.8 298 64.4
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 2.0e-100 369.8 297 67.0
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 1.0e-99 367.5 286 68.5
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 1.0e-99 367.5 301 64.5
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 3.8e-99 365.5 242 76.0
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 3.8e-99 365.5 296 65.9
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 5.0e-99 365.2 302 66.2
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 1.1e-98 364.0 302 65.9
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 1.1e-98 364.0 244 75.4
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 9.4e-98 360.9 301 63.5
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 1.6e-97 360.1 289 65.7
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 2.1e-97 359.8 240 73.3
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 7.9e-97 357.8 304 63.8
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 7.9e-97 357.8 297 64.6
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 1.0e-96 357.5 298 64.4
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 1.0e-96 357.5 298 63.4
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 1.4e-96 357.1 287 63.4
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 1.4e-96 357.1 249 72.3
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 3.9e-96 355.5 287 63.4
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 5.1e-96 355.1 299 60.9
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 5.1e-96 355.1 287 64.1
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 2.0e-95 353.2 297 63.3
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 4.3e-95 352.1 281 65.5
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 4.3e-95 352.1 269 66.5
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 1.3e-94 350.5 240 70.4
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 4.8e-94 348.6 240 70.4
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 6.3e-94 348.2 239 71.1
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 1.4e-93 347.1 297 62.3
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 3.1e-93 345.9 287 64.1
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 9.1e-93 344.4 297 60.6
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 1.2e-92 344.0 246 70.3
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 1.5e-92 343.6 295 61.0
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 2.6e-92 342.8 296 60.5
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 3.4e-92 342.4 285 61.8
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 4.5e-92 342.0 281 63.7
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 4.5e-92 342.0 240 72.1
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 2.2e-91 339.7 275 65.8
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 1.4e-90 337.0 240 69.6
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 2.5e-90 336.3 243 70.4
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 3.2e-90 335.9 223 73.5
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 4.2e-90 335.5 285 63.9
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 5.5e-90 335.1 241 70.1
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 5.5e-90 335.1 256 65.6
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.2e-89 334.0 280 62.9
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 1.2e-89 334.0 284 60.9
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.7e-89 332.8 280 62.9
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 3.6e-89 332.4 240 70.4
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 4.7e-89 332.0 284 60.6
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 7.9e-89 331.3 297 59.3
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 7.9e-89 331.3 296 60.1
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 7.9e-89 331.3 291 59.5
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 1.0e-88 330.9 266 65.8
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 1.0e-88 330.9 219 75.8
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 1.4e-88 330.5 296 59.1
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 1.4e-88 330.5 254 65.7
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 1.8e-88 330.1 298 59.7
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 1.5e-87 327.0 298 58.4
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 3.3e-87 325.9 220 72.7
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 3.3e-87 325.9 267 65.2
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 4.4e-87 325.5 302 59.3
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 5.7e-87 325.1 299 58.2
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 5.7e-87 325.1 299 58.9
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 5.7e-87 325.1 299 58.2
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 5.7e-87 325.1 218 70.6
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 7.4e-87 324.7 296 57.1
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 9.1e-85 317.8 264 63.3
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 7.7e-84 314.7 296 58.8
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 5.0e-83 312.0 267 62.2
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 4.2e-82 308.9 260 62.3
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 5.5e-82 308.5 248 63.3
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 3.6e-81 305.8 275 58.9
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 4.0e-80 302.4 277 58.5
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 2.0e-79 300.1 295 57.6
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 3.3e-79 299.3 322 55.3
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 7.5e-79 298.1 304 57.9
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 9.1e-77 291.2 240 64.6
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 2.9e-75 286.2 244 57.0
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 1.6e-73 280.4 213 67.1
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 6.1e-73 278.5 183 73.2
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.4e-72 277.3 239 61.9
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 4.0e-72 275.8 242 61.2
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 1.5e-71 273.9 247 61.1
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 2.0e-71 273.5 224 57.1
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 2.2e-70 270.0 224 54.5
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 3.1e-69 266.2 175 74.3
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 9.1e-69 264.6 291 48.8
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 1.9e-66 256.9 326 48.2
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 9.4e-66 254.6 250 54.4
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 1.2e-63 247.7 163 74.8
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 2.2e-62 243.4 233 51.1
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 1.1e-58 231.1 276 44.9
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 3.0e-56 223.0 250 48.8
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 4.0e-56 222.6 179 56.4
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 1.4e-53 214.2 237 54.0
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 9.2e-53 211.5 149 68.5
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 3.0e-51 206.5 255 45.5
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 1.2e-49 201.1 229 52.4
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 1.4e-45 187.6 180 60.6
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 2.4e-45 186.8 112 80.4
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 1.4e-37 161.0 130 66.2
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 1.5e-31 141.0 223 35.9
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 1.1e-29 134.8 142 52.8
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 3.5e-28 129.8 109 58.7
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 4.6e-28 129.4 193 39.9
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 4.3e-26 122.9 79 72.2
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 1.6e-25 120.9 88 65.9
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 3.6e-25 119.8 79 70.9
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 6.2e-25 119.0 74 74.3
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 3.8e-22 109.8 80 68.8
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 2.1e-17 94.0 167 31.7
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 1.2e-15 88.2 80 58.8
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 9.9e-15 85.1 196 28.1
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 7.1e-13 79.0 52 76.9
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 2.7e-12 77.0 54 70.4
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 9.6e-10 68.6 60 58.3
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 1.6e-09 67.8 97 42.3
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.4e-08 64.7 97 43.3
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.4e-08 64.7 97 43.3
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 1.8e-08 64.3 97 43.3
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 1.8e-08 64.3 61 55.7
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.1e-08 63.5 97 42.3
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 4.0e-08 63.2 97 43.3


User provided reference genes

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