Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 8.7e-293 1009.6 522 100.0
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.2e-228 796.6 430 96.0
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 5.9e-132 475.3 375 65.1
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 3.7e-126 456.1 482 52.5
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 8.3e-126 454.9 445 57.3
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 2.7e-124 449.9 577 47.8
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.3e-123 447.6 372 62.1
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.9e-122 443.7 485 50.7
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 5.6e-122 442.2 530 47.9
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 2.0e-119 433.7 374 60.7
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 2.6e-119 433.3 445 54.8
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 9.8e-119 431.4 442 54.3
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.6e-116 424.1 435 53.8
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.6e-116 424.1 496 48.2
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 5.0e-115 419.1 361 59.0
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 6.6e-115 418.7 505 47.9
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 8.6e-115 418.3 376 57.7
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 2.5e-114 416.8 375 58.1
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 4.3e-114 416.0 349 59.6
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 4.3e-114 416.0 489 49.3
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 2.8e-113 413.3 391 56.3
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.8e-113 413.3 394 56.3
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 4.7e-113 412.5 464 50.4
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 4.7e-113 412.5 394 56.6
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 6.2e-113 412.1 464 49.8
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 1.1e-112 411.4 377 58.9
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 2.3e-112 410.2 375 58.9
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 2.3e-112 410.2 456 50.4
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 4.0e-112 409.5 407 54.5
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 4.0e-112 409.5 235 86.4
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 6.8e-112 408.7 509 47.7
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 4.4e-111 406.0 326 62.9
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 9.8e-111 404.8 407 55.3
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 8.3e-110 401.7 461 50.1
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 1.9e-109 400.6 376 55.9
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 5.4e-109 399.1 376 57.2
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 1.6e-108 397.5 376 55.6
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 3.5e-108 396.4 376 56.6
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 1.7e-107 394.0 504 46.0
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.7e-107 394.0 376 56.4
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 2.3e-107 393.7 352 58.0
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 5.1e-107 392.5 359 57.7
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 1.9e-106 390.6 384 54.9
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 3.3e-106 389.8 330 58.8
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 9.5e-106 388.3 377 55.4
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 2.8e-105 386.7 336 58.0
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.1e-104 384.8 330 58.2
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 1.4e-104 384.4 435 49.4
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 1.4e-104 384.4 466 47.0
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 1.8e-104 384.0 424 50.7
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 3.1e-104 383.3 336 57.4
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 8.9e-104 381.7 352 55.7
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 1.2e-103 381.3 376 53.7
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 4.4e-103 379.4 422 51.9
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 9.9e-103 378.3 490 46.7
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 9.9e-103 378.3 352 57.4
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 4.9e-102 375.9 440 49.8
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 1.1e-101 374.8 348 57.2
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 1.1e-101 374.8 384 52.3
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 4.1e-101 372.9 332 57.8
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 6.0e-100 369.0 427 50.4
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 1.7e-99 367.5 412 50.5
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 1.6e-97 360.9 345 55.9
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 2.8e-97 360.1 319 59.6
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 5.2e-96 355.9 335 56.4
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 8.4e-94 348.6 559 40.1
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 3.2e-93 346.7 499 43.9
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 9.2e-93 345.1 359 50.1
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.6e-92 344.4 453 44.4
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 1.0e-91 341.7 408 47.5
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 1.3e-91 341.3 333 54.7
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 1.1e-90 338.2 334 54.5
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 7.3e-90 335.5 359 49.3
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 3.6e-89 333.2 470 44.0
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 6.2e-89 332.4 326 54.6
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 1.4e-88 331.3 292 58.2
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 5.8e-87 325.9 325 53.5
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 3.8e-86 323.2 314 54.5
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 6.4e-86 322.4 431 46.2
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 7.8e-84 315.5 403 45.4
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 1.5e-82 311.2 263 60.5
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 2.5e-82 310.5 287 57.5
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 3.3e-82 310.1 263 59.7
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 3.3e-82 310.1 263 59.7
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 1.6e-81 307.8 288 55.2
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.1e-80 305.1 317 50.8
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 7.6e-79 298.9 207 67.6
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 1.1e-77 295.0 212 67.0
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 9.3e-77 292.0 286 55.9
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 1.6e-76 291.2 357 47.3
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 1.6e-73 281.2 327 51.7
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.3e-70 271.6 293 50.9
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 2.1e-68 264.2 334 46.7
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.9e-66 257.7 350 46.6
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.9e-66 257.7 402 39.1
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.1e-58 231.9 382 42.4
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.3e-54 218.4 419 37.7
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 2.2e-54 217.6 328 38.1
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 7.9e-52 209.1 190 52.6
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 5.7e-50 203.0 271 43.9
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.3e-46 191.8 118 72.9
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 5.0e-46 189.9 124 68.5
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 3.8e-38 163.7 238 43.7
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 1.7e-33 148.3 514 28.2
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 8.5e-30 136.0 189 44.4
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 8.5e-30 136.0 189 44.4
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 1.0e-27 129.0 177 46.9
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 7.7e-23 112.8 138 48.6


User provided reference genes

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