Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 0.0e+00 1132.9 664 100.0
PSO063G4508 Papaver somniferum HOM05D006730 ORTHO05D008189 8.3e-139 498.4 344 81.1
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 3.5e-52 210.7 613 30.5
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 7.2e-50 203.0 613 31.0
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 6.1e-41 173.3 558 27.1
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 2.6e-39 167.9 389 33.7
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 2.6e-39 167.9 456 30.7
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 9.8e-39 166.0 427 30.9
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 2.4e-37 161.4 474 29.3
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 3.1e-37 161.0 425 30.8
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 1.6e-36 158.7 460 29.8
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 1.0e-35 156.0 615 27.2
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 1.3e-35 155.6 615 27.2
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 1.7e-35 155.2 417 30.2
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 2.3e-35 154.8 627 27.1
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 2.5e-34 151.4 396 29.8
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 3.3e-34 151.0 628 27.2
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 5.6e-34 150.2 604 26.8
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 7.3e-34 149.8 423 28.8
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 7.3e-34 149.8 422 30.1
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 7.3e-34 149.8 424 30.9
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 9.5e-34 149.4 429 29.8
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 1.2e-33 149.1 583 29.2
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 1.6e-33 148.7 482 27.6
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 2.1e-33 148.3 453 29.4
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 2.8e-33 147.9 637 26.5
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 6.1e-33 146.7 494 27.7
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 1.4e-32 145.6 408 30.1
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 1.4e-32 145.6 636 26.4
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 3.0e-32 144.4 440 28.4
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 3.0e-32 144.4 422 29.4
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 1.5e-31 142.1 410 27.6
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 1.5e-31 142.1 612 26.5
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 3.4e-31 141.0 471 28.7
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 4.4e-31 140.6 497 28.6
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 4.4e-31 140.6 437 29.5
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 4.4e-31 140.6 478 29.3
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 5.7e-31 140.2 478 29.3
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 1.3e-30 139.0 441 28.1
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.3e-30 139.0 399 31.3
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 1.7e-30 138.7 427 29.7
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 2.2e-30 138.3 650 25.5
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 2.9e-30 137.9 415 28.4
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 2.9e-30 137.9 418 27.8
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 6.4e-30 136.7 400 29.5
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 6.4e-30 136.7 440 29.1
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 1.1e-29 136.0 640 25.6
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 3.2e-29 134.4 561 24.6
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 3.2e-29 134.4 619 26.3
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 4.1e-29 134.0 434 28.1
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 4.1e-29 134.0 452 29.9
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 4.1e-29 134.0 455 27.7
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 5.4e-29 133.7 618 24.9
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 7.0e-29 133.3 410 28.0
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 1.2e-28 132.5 469 27.9
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 2.0e-28 131.7 463 27.4
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 2.7e-28 131.3 455 28.1
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 1.3e-27 129.0 654 25.5
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 2.3e-27 128.3 577 27.7
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 3.9e-27 127.5 463 28.9
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 5.0e-27 127.1 414 27.3
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 5.0e-27 127.1 612 24.7
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 5.0e-27 127.1 371 27.5
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 1.5e-26 125.6 479 27.3
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 1.9e-26 125.2 469 26.7
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 4.3e-26 124.0 403 27.8
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 5.6e-26 123.6 448 26.3
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 7.3e-26 123.2 379 29.3
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 1.2e-25 122.5 496 26.6
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 4.7e-25 120.6 452 27.2
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 8.0e-25 119.8 408 28.2
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 8.0e-25 119.8 457 26.3
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 8.0e-25 119.8 457 26.0
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 8.0e-25 119.8 468 24.8
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 1.1e-24 119.4 408 28.2
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 1.4e-24 119.0 631 24.1
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 1.4e-24 119.0 428 26.9
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 2.3e-24 118.2 430 25.3
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 2.3e-24 118.2 456 26.8
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 4.0e-24 117.5 625 28.2
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 5.2e-24 117.1 482 27.4
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 6.8e-24 116.7 633 23.9
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 1.2e-23 115.9 309 31.1
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 2.0e-23 115.2 625 28.2
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 4.4e-23 114.0 375 28.0
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 5.8e-23 113.6 433 28.9
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 7.5e-23 113.2 556 24.5
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 1.3e-22 112.5 416 27.9
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 1.9e-21 108.6 328 29.0
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 2.4e-21 108.2 412 26.5
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 2.4e-21 108.2 412 26.5
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 3.2e-21 107.8 451 26.2
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 9.2e-21 106.3 409 28.6
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 2.7e-20 104.8 275 31.3
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 6.6e-19 100.1 426 24.6
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 8.6e-19 99.8 416 25.5
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 1.2e-17 95.9 425 24.0
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 1.6e-17 95.5 466 26.8
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 2.1e-17 95.1 499 25.1
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 3.6e-17 94.4 296 27.4
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 6.2e-17 93.6 444 24.1
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 1.2e-15 89.4 378 24.9
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 1.0e-11 76.3 345 28.1
FAN28G2072 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.6e-09 68.9 270 26.3
PSO473G0001 Papaver somniferum HOM05D006730 ORTHO05D303790 1.8e-08 65.5 187 29.9
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 1.3e-06 59.3 236 24.2


User provided reference genes

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