Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5651 Papaver somniferum HOM05D004399 ORTHO05D005303 3.4e-132 474.9 226 100.0
PSO478G0010 Papaver somniferum HOM05D004399 ORTHO05D005303 5.0e-128 461.1 226 98.2
PSO832G2862 Papaver somniferum HOM05D004399 ORTHO05D005303 1.0e-125 453.4 226 94.7
COL.COLO4_27864 Corchorus olitorius HOM05D004399 ORTHO05D005303 1.7e-115 419.5 226 85.4
Aqoxy3G03260 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 1.8e-114 416.0 222 86.0
TAR622G1336 Trochodendron aralioides HOM05D004399 ORTHO05D005303 1.8e-114 416.0 225 86.2
Nn3g17119 Nelumbo nucifera HOM05D004399 ORTHO05D005303 2.4e-114 415.6 224 85.3
Manes.05G109300 Manihot esculenta HOM05D004399 ORTHO05D005303 7.0e-114 414.1 225 84.0
RcHm_v2.0_Chr4g0438081 Rosa chinensis HOM05D004399 ORTHO05D005303 1.2e-113 413.3 225 83.6
Duzib251G0565 Durio zibethinus HOM05D004399 ORTHO05D005303 1.6e-113 412.9 226 84.5
Lj3C1029T7 Lonicera japonica HOM05D004399 ORTHO05D005303 2.7e-113 412.1 223 84.3
Ah.02g126810 Amaranthus hybridus HOM05D004399 ORTHO05D005303 4.6e-113 411.4 223 84.3
Ca_08608_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 4.6e-113 411.4 223 85.2
HanXRQChr12g0363151 Helianthus annuus HOM05D004399 ORTHO05D005303 4.6e-113 411.4 222 84.2
PGR083G0959 Punica granatum HOM05D004399 ORTHO05D005303 4.6e-113 411.4 226 84.1
FvH4_4g29830 Fragaria vesca HOM05D004399 ORTHO05D005303 5.9e-113 411.0 225 84.0
FAN22G0874 Fragaria x ananassa HOM05D004399 ORTHO05D005303 5.9e-113 411.0 225 83.1
Nn4g24779 Nelumbo nucifera HOM05D004399 ORTHO05D005303 5.9e-113 411.0 225 84.0
QL03p073920 Quercus lobata HOM05D004399 ORTHO05D005303 5.9e-113 411.0 224 84.4
Psat3g063920 Pisum sativum HOM05D004399 ORTHO05D005303 7.8e-113 410.6 224 84.8
Thecc.02G328800 Theobroma cacao HOM05D004399 ORTHO05D005303 1.3e-112 409.8 226 84.5
Ca_25695_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 1.7e-112 409.5 224 84.4
Dinv34060 Davidia involucrata HOM05D004399 ORTHO05D005303 1.7e-112 409.5 223 83.9
FAN17G2847 Fragaria x ananassa HOM05D004399 ORTHO05D005303 1.7e-112 409.5 225 83.1
AUR62003087 Chenopodium quinoa HOM05D004399 ORTHO05D005303 2.3e-112 409.1 221 84.6
CiPaw.05G124200 Carya illinoinensis HOM05D004399 ORTHO05D005303 2.9e-112 408.7 225 83.6
MD13G1060600 Malus domestica HOM05D004399 ORTHO05D005303 2.9e-112 408.7 225 83.1
Ah.03g138840 Amaranthus hybridus HOM05D004399 ORTHO05D005303 5.0e-112 407.9 224 83.9
Prupe.1G288800 Prunus persica HOM05D004399 ORTHO05D005303 5.0e-112 407.9 225 83.6
PGSC0003DMG402028313 Solanum tuberosum HOM05D004399 ORTHO05D005303 5.0e-112 407.9 225 82.2
FAN12G0059 Fragaria x ananassa HOM05D004399 ORTHO05D005303 6.6e-112 407.5 225 83.6
Potri.010G157500 Populus trichocarpa HOM05D004399 ORTHO05D005303 6.6e-112 407.5 224 84.4
Gohir.A03G104700 Gossypium hirsutum HOM05D004399 ORTHO05D005303 8.6e-112 407.1 226 82.7
Eucgr.B03145 Eucalyptus grandis HOM05D004399 ORTHO05D005303 1.1e-111 406.8 226 84.1
Potri.008G097100 Populus trichocarpa HOM05D004399 ORTHO05D005303 1.5e-111 406.4 224 83.9
CSS0044473 Camellia sinensis var. sinensis HOM05D004399 ORTHO05D005303 1.9e-111 406.0 222 83.8
TWI75G0511 Tripterygium wilfordii HOM05D004399 ORTHO05D005303 1.9e-111 406.0 225 81.8
CANSAT11G0637 Cannabis sativa HOM05D004399 ORTHO05D005303 2.5e-111 405.6 221 84.6
EL10Ac6g15013 Beta vulgaris HOM05D004399 ORTHO05D005303 3.3e-111 405.2 224 83.0
MD16G1059800 Malus domestica HOM05D004399 ORTHO05D005303 3.3e-111 405.2 225 82.7
Sc11g0002530 Simmondsia chinensis HOM05D004399 ORTHO05D005303 3.3e-111 405.2 223 83.0
Solyc05g012150.4 Solanum lycopersicum HOM05D004399 ORTHO05D005303 3.3e-111 405.2 225 81.8
Rhsim09G0126300 Rhododendron simsii HOM05D004399 ORTHO05D005303 4.3e-111 404.8 239 80.8
Hund05832 Selenicereus undatus HOM05D004399 ORTHO05D005303 4.3e-111 404.8 224 83.5
CANSAT64G2641 Cannabis sativa HOM05D004399 ORTHO05D005303 5.6e-111 404.4 221 84.6
ECA233G2368 Erigeron canadensis HOM05D004399 ORTHO05D005303 5.6e-111 404.4 222 82.4
CAN.G707.11 Capsicum annuum HOM05D004399 ORTHO05D005303 7.3e-111 404.1 225 81.3
MBI14_g37191_MAGBIO Magnolia biondii HOM05D004399 ORTHO05D005303 7.3e-111 404.1 223 83.0
Peaxi162Scf00175g00428 Petunia axillaris HOM05D004399 ORTHO05D005303 7.3e-111 404.1 225 81.3
Cpa.g.sc1.139 Carica papaya HOM05D004399 ORTHO05D005303 9.5e-111 403.7 226 82.7
THA.LOC104805201 Tarenaya hassleriana HOM05D004399 ORTHO05D005303 9.5e-111 403.7 225 83.1
Sopen05g006940 Solanum pennellii HOM05D004399 ORTHO05D005303 1.2e-110 403.3 225 81.3
arahy.Tifrunner.gnm1.ann1.MJW4NY Arachis hypogaea HOM05D004399 ORTHO05D005303 2.8e-110 402.1 224 83.5
Lj6A777T47 Lonicera japonica HOM05D004399 ORTHO05D005303 3.6e-110 401.7 221 84.2
Lj1g0019699 Lotus japonicus HOM05D004399 ORTHO05D005303 3.6e-110 401.7 221 84.2
vmacro10433 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 4.7e-110 401.4 226 82.3
Ciclev10032681m.g Citrus clementina HOM05D004399 ORTHO05D005303 1.0e-109 400.2 224 82.1
Cfa008867 Carpinus fangiana HOM05D004399 ORTHO05D005303 1.4e-109 399.8 225 82.7
Sabra08G0073300 Salix brachista HOM05D004399 ORTHO05D005303 1.4e-109 399.8 221 84.6
AUR62007904 Chenopodium quinoa HOM05D004399 ORTHO05D005303 1.8e-109 399.4 221 82.4
Haze_11894 Corylus avellana HOM05D004399 ORTHO05D005303 1.8e-109 399.4 225 82.2
HanXRQChr08g0211681 Helianthus annuus HOM05D004399 ORTHO05D005303 1.8e-109 399.4 222 81.5
Phvul.010G102900 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 1.8e-109 399.4 224 81.2
Aqoxy4G03091 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 2.3e-109 399.1 215 85.6
Aa31LG2G6990 Aethionema arabicum HOM05D004399 ORTHO05D005303 4.0e-109 398.3 225 80.0
arahy.Tifrunner.gnm1.ann1.E76E6E Arachis hypogaea HOM05D004399 ORTHO05D005303 6.8e-109 397.5 224 83.0
Lsat_1_v5_gn_8_46460 Lactuca sativa HOM05D004399 ORTHO05D005303 6.8e-109 397.5 217 83.4
VMungo0331G0538 Vigna mungo HOM05D004399 ORTHO05D005303 6.8e-109 397.5 224 81.2
Medtr4g094990 Medicago truncatula HOM05D004399 ORTHO05D005303 8.9e-109 397.1 224 80.8
Migut.L01179 Erythranthe guttata HOM05D004399 ORTHO05D005303 1.5e-108 396.4 224 81.7
Cc06_g15640 Coffea canephora HOM05D004399 ORTHO05D005303 2.0e-108 396.0 225 78.7
Medtr7g095060 Medicago truncatula HOM05D004399 ORTHO05D005303 2.0e-108 396.0 224 81.2
Nitab4.5_0007061g0010 Nicotiana tabacum HOM05D004399 ORTHO05D005303 2.0e-108 396.0 225 80.4
SalBow4G1206 Salvia bowleyana HOM05D004399 ORTHO05D005303 2.0e-108 396.0 224 81.2
Lalb_Chr17g0341271 Lupinus albus HOM05D004399 ORTHO05D005303 2.6e-108 395.6 224 82.6
Atru.chr11.1611 Acer truncatum HOM05D004399 ORTHO05D005303 7.5e-108 394.0 225 81.8
MSTRG.7738 Avicennia marina HOM05D004399 ORTHO05D005303 7.5e-108 394.0 224 81.2
SGA_v2.0_scaffold16G07803 Striga asiatica HOM05D004399 ORTHO05D005303 7.5e-108 394.0 224 80.4
Zm00001eb433530 Zea mays HOM05D004399 ORTHO05D005303 9.8e-108 393.7 222 79.3
Thhalv10004874m.g Eutrema salsugineum HOM05D004399 ORTHO05D005303 1.3e-107 393.3 225 80.9
MELO3C011412.2 Cucumis melo HOM05D004399 ORTHO05D005303 1.7e-107 392.9 221 81.9
CsaV3_6G033760 Cucumis sativus L. HOM05D004399 ORTHO05D005303 1.7e-107 392.9 221 81.9
Glyma.16G032800 Glycine max HOM05D004399 ORTHO05D005303 1.7e-107 392.9 221 82.8
A06p42990 Brassica napus HOM05D004399 ORTHO05D005303 2.9e-107 392.1 225 80.0
Glyma.07G066700 Glycine max HOM05D004399 ORTHO05D005303 2.9e-107 392.1 224 81.7
Os04g0674200 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 3.7e-107 391.7 224 78.1
AL5G13460 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 4.9e-107 391.3 226 79.6
AT2G03690 Arabidopsis thaliana HOM05D004399 ORTHO05D005303 4.9e-107 391.3 226 79.6
Carub.0005s0281 Capsella rubella HOM05D004399 ORTHO05D005303 4.9e-107 391.3 226 79.2
ClCG08G010510 Citrullus lanatus HOM05D004399 ORTHO05D005303 4.9e-107 391.3 225 80.9
AL5G13480 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 6.4e-107 391.0 226 79.6
BcaC06g31172 Brassica carinata HOM05D004399 ORTHO05D005303 2.4e-106 389.0 225 79.1
Gorai.005G145900 Gossypium raimondii HOM05D004399 ORTHO05D005303 2.4e-106 389.0 212 84.0
Sp2g14510 Schrenkiella parvula HOM05D004399 ORTHO05D005303 2.4e-106 389.0 225 79.1
BcaC06g31162 Brassica carinata HOM05D004399 ORTHO05D005303 3.2e-106 388.7 223 79.4
C07p34040 Brassica napus HOM05D004399 ORTHO05D005303 3.2e-106 388.7 223 79.4
BolC7t43918H Brassica oleracea HOM05D004399 ORTHO05D005303 3.2e-106 388.7 223 79.4
BcaB07g30287 Brassica carinata HOM05D004399 ORTHO05D005303 4.1e-106 388.3 225 79.1
Medtr4g094998 Medicago truncatula HOM05D004399 ORTHO05D005303 4.1e-106 388.3 224 78.6
DCAR_024127 Daucus carota HOM05D004399 ORTHO05D005303 9.2e-106 387.1 218 82.6
Gohir.D02G129900 Gossypium hirsutum HOM05D004399 ORTHO05D005303 1.2e-105 386.7 212 83.5
Oeu031535.3 Olea europaea HOM05D004399 ORTHO05D005303 1.2e-105 386.7 251 72.9
Os05g0188800 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 1.6e-105 386.3 224 76.8
CARHR146010 Cardamine hirsuta HOM05D004399 ORTHO05D005303 2.0e-105 386.0 226 79.6
Hma1.2p1_0566F.1_g179870 Hydrangea macrophylla HOM05D004399 ORTHO05D005303 2.0e-105 386.0 221 79.2
CDE02G0376 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 3.5e-105 385.2 216 81.9
Nitab4.5_0000231g0090 Nicotiana tabacum HOM05D004399 ORTHO05D005303 3.5e-105 385.2 247 73.3
BcaC03g17230 Brassica carinata HOM05D004399 ORTHO05D005303 7.8e-105 384.0 225 78.7
BolC2t11249H Brassica oleracea HOM05D004399 ORTHO05D005303 7.8e-105 384.0 225 78.7
A02p33520 Brassica napus HOM05D004399 ORTHO05D005303 1.0e-104 383.6 225 78.2
Sed0000590 Sechium edule HOM05D004399 ORTHO05D005303 2.3e-104 382.5 222 79.7
SalBow2G2941 Salvia bowleyana HOM05D004399 ORTHO05D005303 3.9e-104 381.7 279 67.0
CDE04G3031 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 2.5e-103 379.0 216 80.6
DCAR_026680 Daucus carota HOM05D004399 ORTHO05D005303 4.3e-103 378.3 226 79.2
TPR.G29232 Trifolium pratense HOM05D004399 ORTHO05D005303 5.6e-103 377.9 224 79.5
Sed0002833 Sechium edule HOM05D004399 ORTHO05D005303 1.1e-101 373.6 222 78.4
SEGI_29941 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 4.1e-98 361.7 218 73.4
C02p51640 Brassica napus HOM05D004399 ORTHO05D005303 4.6e-97 358.2 208 79.8
AUR62019674 Chenopodium quinoa HOM05D004399 ORTHO05D005303 1.1e-95 353.6 228 73.2
Mapoly0124s0026 Marchantia polymorpha HOM05D004399 ORTHO05D005303 1.4e-90 336.7 223 68.6
AagrBONN_evm.TU.Sc2ySwM_368.1886 Anthoceros agrestis HOM05D004399 ORTHO05D005303 1.6e-89 333.2 221 68.8
Pp3c2_220 Physcomitrium patens HOM05D004399 ORTHO05D005303 3.9e-88 328.6 217 68.7
SMO196G0238 Selaginella moellendorffii HOM05D004399 ORTHO05D005303 8.4e-83 310.8 220 64.1
MD13G1061300 Malus domestica HOM05D004399 ORTHO05D005303 4.8e-78 295.0 164 86.0
GSVIVG01000552001 Vitis vinifera HOM05D004399 ORTHO05D005303 1.1e-77 293.9 161 85.7
Sed0017877 Sechium edule HOM05D004399 ORTHO05D005303 7.6e-76 287.7 169 77.5
SalBow4G2688 Salvia bowleyana HOM05D004399 ORTHO05D005303 6.0e-73 278.1 153 82.4
ATR1120G108 Amborella trichopoda HOM05D004399 ORTHO05D005303 1.5e-71 273.5 162 75.3
CBR_g38753 Chara braunii HOM05D004399 ORTHO05D001303 1.1e-69 267.3 215 57.7
SalBow4G1336 Salvia bowleyana HOM05D004399 ORTHO05D005303 1.3e-64 250.4 163 72.4
TPR.G35678 Trifolium pratense HOM05D004399 ORTHO05D005303 1.8e-64 250.0 131 83.2
Cre03.g154850 Chlamydomonas reinhardtii HOM05D004399 ORTHO05D005303 2.4e-61 239.6 214 54.2
PRCOL_00001738 Prasinoderma coloniale HOM05D004399 ORTHO05D005303 3.8e-59 232.3 211 54.0
HanXRQChr10g0298331 Helianthus annuus HOM05D004399 ORTHO05D005303 1.9e-58 229.9 129 80.6
MCO10G350 Micromonas commoda HOM05D004399 ORTHO05D005303 2.1e-54 216.5 213 48.4
vmacro20929 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 2.1e-54 216.5 148 75.0
unitig_8.g3180 Utricularia gibba HOM05D004399 ORTHO05D005303 2.9e-51 206.1 111 87.4
Phvul.007G165400 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 6.1e-49 198.4 115 74.8
Glyma.02G119500 Glycine max HOM05D004399 ORTHO05D005303 6.7e-48 194.9 113 74.3
SMO187G0002 Selaginella moellendorffii HOM05D004399 ORTHO05D005303 5.0e-43 178.7 136 58.1
MBI14_g45258_MAGBIO Magnolia biondii HOM05D004399 ORTHO05D005303 1.3e-38 164.1 88 80.7
Carub.0005s2415 Capsella rubella HOM05D004399 ORTHO05D005303 1.2e-36 157.5 102 72.5
Cfa024149 Carpinus fangiana HOM05D004399 ORTHO05D005303 3.2e-34 149.4 220 37.3
HanXRQChr13g0414251 Helianthus annuus HOM05D004399 ORTHO05D005303 4.7e-33 145.6 97 75.3
BcaB07g30659 Brassica carinata HOM05D004399 ORTHO05D005303 1.8e-29 133.7 134 50.0
FAN04G2106 Fragaria x ananassa HOM05D004399 ORTHO05D005303 7.0e-29 131.7 75 84.0
SalBow4G1060 Salvia bowleyana HOM05D004399 ORTHO05D005303 1.0e-27 127.9 66 87.9
TPR.G30910 Trifolium pratense HOM05D004399 ORTHO05D005303 8.5e-27 124.8 61 91.8
Phvul.007G165450 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 2.5e-26 123.2 78 76.9
Actinidia12918 Actinidia chinensis HOM05D004399 ORTHO05D005303 8.0e-25 118.2 83 63.9
SalBow4G1426 Salvia bowleyana HOM05D000195 ORTHO05D000377 6.3e-22 108.6 61 85.2
HanXRQChr01g0013031 Helianthus annuus HOM05D004399 ORTHO05D005303 3.1e-21 106.3 54 87.0
ATR1120G192 Amborella trichopoda HOM05D004399 ORTHO05D005303 2.9e-19 99.8 61 77.0
TPR.G35682 Trifolium pratense HOM05D004399 ORTHO05D005303 8.5e-19 98.2 64 75.0
SalBow4G1755 Salvia bowleyana HOM05D004399 ORTHO05D005303 1.5e-18 97.4 59 64.4
Nn4g23036 Nelumbo nucifera HOM05D004399 ORTHO05D005303 4.2e-18 95.9 64 73.4
RcHm_v2.0_Chr7g0182561 Rosa chinensis HOM05D004399 ORTHO05D005303 4.2e-18 95.9 61 73.8
Glyma.07G066400 Glycine max HOM05D004399 ORTHO05D005303 2.0e-15 87.0 54 79.6
HPP92_015023 Vanilla planifolia HOM05D000240 ORTHO05D001153 2.8e-14 83.2 100 46.0
FAN08G1770 Fragaria x ananassa HOM05D004399 ORTHO05D005303 4.8e-14 82.4 128 41.4
SEGI_28424 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 4.5e-12 75.9 51 70.6
A09p24540 Brassica napus HOM05D004399 ORTHO05D005303 8.5e-11 71.6 39 79.5
SalBow4G0663 Salvia bowleyana HOM05D000195 ORTHO05D000377 5.7e-07 58.9 35 77.1


User provided reference genes

Program Settings