Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 6.2e-274 946.8 469 100.0
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 6.5e-271 936.8 469 98.7
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 4.9e-202 708.0 467 74.7
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 6.4e-202 707.6 470 74.9
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 3.9e-199 698.4 471 73.0
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 3.1e-196 688.7 449 74.2
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 4.0e-196 688.3 472 72.2
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 8.9e-196 687.2 467 70.9
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 1.2e-195 686.8 469 71.9
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 2.0e-195 686.0 467 71.1
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 4.4e-195 684.9 471 72.4
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 1.9e-193 679.5 466 71.0
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 9.2e-193 677.2 466 71.0
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 2.1e-192 676.0 465 70.5
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 2.7e-192 675.6 466 71.0
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.3e-191 672.5 464 70.7
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 6.6e-191 671.0 445 73.5
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 8.6e-191 670.6 464 70.3
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 4.3e-190 668.3 471 70.7
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 5.6e-190 667.9 472 70.6
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 7.3e-190 667.5 465 71.4
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 9.5e-190 667.2 468 70.5
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 2.1e-189 666.0 469 69.5
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 1.1e-188 663.7 467 70.2
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 1.1e-188 663.7 469 69.7
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 3.1e-188 662.1 465 71.4
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 5.2e-188 661.4 455 71.6
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 2.0e-187 659.4 453 71.7
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 2.0e-187 659.4 471 69.2
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 3.4e-187 658.7 458 69.7
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 5.8e-187 657.9 471 70.5
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 5.8e-187 657.9 471 69.4
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 7.6e-187 657.5 460 70.4
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 1.7e-186 656.4 472 70.3
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 2.2e-186 656.0 449 70.8
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 6.4e-186 654.4 469 68.7
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 6.4e-186 654.4 472 70.3
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 1.4e-185 653.3 463 69.8
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 1.4e-185 653.3 471 70.1
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 1.4e-185 653.3 469 68.7
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 1.4e-185 653.3 464 69.4
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 3.2e-185 652.1 457 70.5
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 3.2e-185 652.1 453 70.6
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 4.2e-185 651.7 468 67.7
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 5.4e-185 651.4 468 70.5
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 9.2e-185 650.6 460 68.5
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 1.2e-184 650.2 469 68.7
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.6e-184 649.8 468 68.4
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 1.6e-184 649.8 468 69.4
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 3.5e-184 648.7 473 68.9
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 3.5e-184 648.7 468 68.2
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 4.6e-184 648.3 444 70.3
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 6.0e-184 647.9 441 71.4
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 2.3e-183 646.0 469 68.0
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.0e-183 645.6 469 67.8
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 3.0e-183 645.6 466 67.8
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 3.0e-183 645.6 460 70.0
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 3.9e-183 645.2 473 70.0
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 5.1e-183 644.8 423 71.6
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 5.1e-183 644.8 473 68.3
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 2.1e-181 639.4 472 67.8
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 2.8e-181 639.0 471 66.7
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 6.2e-181 637.9 458 67.5
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 1.1e-180 637.1 459 67.1
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 9.0e-180 634.0 459 67.3
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 1.2e-179 633.6 489 67.5
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 1.4e-177 626.7 461 67.2
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 2.4e-177 625.9 462 68.0
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 9.3e-177 624.0 461 67.2
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 1.6e-176 623.2 423 71.2
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 1.6e-176 623.2 397 76.1
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 3.5e-176 622.1 462 68.2
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 6.0e-176 621.3 462 67.3
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 6.0e-176 621.3 462 67.3
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.0e-175 620.5 464 66.6
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.3e-175 620.2 515 63.5
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 1.5e-174 616.7 462 67.1
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 1.5e-174 616.7 462 67.1
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 3.3e-174 615.5 456 67.1
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 3.6e-173 612.1 404 74.0
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 8.1e-173 610.9 461 66.4
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 6.9e-172 607.8 461 66.2
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 1.2e-171 607.1 486 64.2
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.6e-168 595.1 408 70.1
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 3.3e-166 589.0 468 63.7
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 1.4e-164 583.6 384 73.4
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 1.1e-158 563.9 420 63.3
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 1.9e-158 563.1 420 63.8
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 2.5e-153 546.2 420 63.1
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.8e-148 530.0 393 67.4
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 3.8e-138 495.7 468 57.9
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 1.2e-136 490.7 325 74.2
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 7.2e-129 464.9 463 55.3
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 7.7e-123 444.9 343 63.0
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.9e-121 440.3 408 54.4
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 1.0e-119 434.5 401 53.6
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 1.8e-119 433.7 403 55.1
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 2.2e-117 426.8 399 54.1
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 1.9e-105 387.1 413 48.2
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 5.0e-98 362.5 408 45.3
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 2.2e-69 267.3 200 64.5
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.9e-65 254.2 207 61.4
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.9e-65 254.2 207 61.4
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 6.2e-64 249.2 186 65.1
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 3.0e-50 203.8 199 51.3
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.7e-24 118.2 89 67.4
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 8.8e-18 95.9 62 66.1


User provided reference genes

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