Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5564 Papaver somniferum HOM05D003703 ORTHO05D004278 3.2e-86 321.6 154 100.0
PSO339G4803 Papaver somniferum HOM05D003703 ORTHO05D004278 1.0e-79 300.1 154 95.5
PSO063G6729 Papaver somniferum HOM05D003703 ORTHO05D004278 5.2e-76 287.7 154 90.3
PSO675G1999 Papaver somniferum HOM05D003703 ORTHO05D004278 2.5e-70 268.9 141 90.1
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 7.8e-32 141.0 136 58.1
Aqoxy2G00073 Aquilegia oxysepala HOM05D003703 ORTHO05D004278 8.1e-29 131.0 136 51.5
Manes.09G033600 Manihot esculenta HOM05D003703 ORTHO05D004278 4.4e-27 125.2 137 52.6
CiPaw.10G027200 Carya illinoinensis HOM05D003703 ORTHO05D004278 5.8e-27 124.8 134 47.8
HanXRQChr10g0300741 Helianthus annuus HOM05D003703 ORTHO05D004278 2.2e-26 122.9 141 49.6
CSS0005195 Camellia sinensis var. sinensis HOM05D003703 ORTHO05D004278 4.9e-26 121.7 139 50.4
Potri.016G047800 Populus trichocarpa HOM05D003703 ORTHO05D004278 8.4e-26 120.9 137 50.4
Sabra16G0051300 Salix brachista HOM05D003703 ORTHO05D004278 8.4e-26 120.9 137 50.4
Atru.chr8.1077 Acer truncatum HOM05D003703 ORTHO05D004278 1.1e-25 120.6 137 48.9
Potri.006G191100 Populus trichocarpa HOM05D003703 ORTHO05D004278 1.1e-25 120.6 137 49.6
Cpa.g.c33371 Carica papaya HOM05D003703 ORTHO05D004278 1.4e-25 120.2 138 50.7
CiPaw.09G031500 Carya illinoinensis HOM05D003703 ORTHO05D004278 1.4e-25 120.2 137 49.6
Duzib093G1286 Durio zibethinus HOM05D003703 ORTHO05D004278 1.4e-25 120.2 137 49.6
Sabra06G0146400 Salix brachista HOM05D003703 ORTHO05D004278 1.4e-25 120.2 137 48.9
Lsat_1_v5_gn_9_26721 Lactuca sativa HOM05D003703 ORTHO05D004278 1.9e-25 119.8 135 47.4
Duzib106G1084 Durio zibethinus HOM05D003703 ORTHO05D004278 3.2e-25 119.0 137 47.4
Thecc.05G169900 Theobroma cacao HOM05D003703 ORTHO05D004278 7.1e-25 117.9 138 48.6
Nitab4.5_0000016g0390 Nicotiana tabacum HOM05D003703 ORTHO05D004278 1.2e-24 117.1 135 48.1
Gohir.A09G127300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 1.6e-24 116.7 136 49.3
Gohir.D09G123500 Gossypium hirsutum HOM05D003703 ORTHO05D004278 1.6e-24 116.7 136 49.3
Manes.08G045500 Manihot esculenta HOM05D003703 ORTHO05D004278 1.6e-24 116.7 139 47.5
QL07p023397 Quercus lobata HOM05D003703 ORTHO05D004278 1.6e-24 116.7 135 49.6
ECA247G0725 Erigeron canadensis HOM05D003703 ORTHO05D004278 2.1e-24 116.3 135 48.9
Gorai.006G142100 Gossypium raimondii HOM05D003703 ORTHO05D004278 2.1e-24 116.3 136 49.3
Gohir.D04G098100 Gossypium hirsutum HOM05D003703 ORTHO05D004278 3.5e-24 115.5 137 48.2
Gorai.006G067100 Gossypium raimondii HOM05D003703 ORTHO05D004278 3.5e-24 115.5 137 48.2
MBI01_g36100_MAGBIO Magnolia biondii HOM05D003703 ORTHO05D004278 3.5e-24 115.5 139 49.6
Nitab4.5_0002035g0010 Nicotiana tabacum HOM05D003703 ORTHO05D004278 4.6e-24 115.2 135 47.4
Ciclev10012846m.g Citrus clementina HOM05D003703 ORTHO05D004278 1.3e-23 113.6 138 48.6
RcHm_v2.0_Chr3g0479981 Rosa chinensis HOM05D003703 ORTHO05D004278 1.3e-23 113.6 141 48.9
DCAR_013556 Daucus carota HOM05D003703 ORTHO05D004278 1.7e-23 113.2 137 48.9
Hma1.2p1_0183F.1_g080800 Hydrangea macrophylla HOM05D003703 ORTHO05D004278 1.7e-23 113.2 136 47.8
TAR369G1018 Trochodendron aralioides HOM05D003703 ORTHO05D004278 5.1e-23 111.7 134 48.5
Prupe.7G075500 Prunus persica HOM05D003703 ORTHO05D004278 8.7e-23 110.9 142 50.0
COL.COLO4_36150 Corchorus olitorius HOM05D003703 ORTHO05D004278 1.1e-22 110.5 144 46.5
Rhsim03G0008400 Rhododendron simsii HOM05D003703 ORTHO05D004278 1.1e-22 110.5 135 47.4
MD14G1059200 Malus domestica HOM05D003703 ORTHO05D004278 1.9e-22 109.8 141 47.5
CAN.G515.11 Capsicum annuum HOM05D003703 ORTHO05D004278 4.3e-22 108.6 136 46.3
Lsat_1_v5_gn_8_74300 Lactuca sativa HOM05D003703 ORTHO05D004278 5.6e-22 108.2 136 46.3
MSTRG.10837 Avicennia marina HOM05D003703 ORTHO05D004278 7.3e-22 107.8 139 48.9
Haze_19973 Corylus avellana HOM05D003703 ORTHO05D004278 7.3e-22 107.8 125 50.4
MD12G1058500 Malus domestica HOM05D003703 ORTHO05D004278 7.3e-22 107.8 140 49.3
Lalb_Chr15g0078951 Lupinus albus HOM05D003703 ORTHO05D004278 9.6e-22 107.5 139 46.0
FAN09G0581 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.3e-21 107.1 145 46.9
Peaxi162Scf00258g00023 Petunia axillaris HOM05D003703 ORTHO05D004278 1.3e-21 107.1 138 44.9
FvH4_6g22530 Fragaria vesca HOM05D003703 ORTHO05D004278 1.6e-21 106.7 145 46.9
FAN14G3432 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.6e-21 106.7 145 46.9
FAN14G3905 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.6e-21 106.7 145 46.9
Gorai.002G225600 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.6e-21 106.7 137 46.0
DCAR_019841 Daucus carota HOM05D003703 ORTHO05D004278 2.1e-21 106.3 120 50.0
Gohir.D01G177600 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.1e-21 106.3 138 46.4
FAN02G0416 Fragaria x ananassa HOM05D003703 ORTHO05D004278 2.8e-21 105.9 145 46.2
Gohir.A01G192300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 3.6e-21 105.5 138 46.4
Actinidia22024 Actinidia chinensis HOM05D003703 ORTHO05D004278 6.2e-21 104.8 135 47.4
EL10Ac3g06932 Beta vulgaris HOM05D003703 ORTHO05D004278 8.1e-21 104.4 159 41.5
FAN05G5107 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.4e-20 103.6 145 46.2
Migut.K00046 Erythranthe guttata HOM05D003703 ORTHO05D004278 3.1e-20 102.4 142 44.4
AUR62024314 Chenopodium quinoa HOM05D003703 ORTHO05D004278 5.3e-20 101.7 161 41.0
Actinidia40438 Actinidia chinensis HOM05D003703 ORTHO05D004278 9.0e-20 100.9 135 46.7
Cfa020181 Carpinus fangiana HOM05D003703 ORTHO05D004278 9.0e-20 100.9 138 46.4
Lju124C28G5 Lonicera japonica HOM05D003703 ORTHO05D004278 9.0e-20 100.9 132 46.2
Oeu035192.1 Olea europaea HOM05D003703 ORTHO05D004278 1.5e-19 100.1 135 45.9
AUR62012046 Chenopodium quinoa HOM05D003703 ORTHO05D004278 2.0e-19 99.8 155 41.3
Cc06_g16110 Coffea canephora HOM05D003703 ORTHO05D004278 3.4e-19 99.0 139 43.9
Solyc03g063550.1 Solanum lycopersicum HOM05D003703 ORTHO05D004278 4.4e-19 98.6 136 43.4
Sopen03g016210 Solanum pennellii HOM05D003703 ORTHO05D004278 4.4e-19 98.6 136 43.4
Actinidia38577 Actinidia chinensis HOM05D003703 ORTHO05D004278 5.8e-19 98.2 136 45.6
PGSC0003DMG400009700 Solanum tuberosum HOM05D003703 ORTHO05D004278 7.6e-19 97.8 135 43.7
TWI53G0257 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 7.6e-19 97.8 136 47.8
Ah.13g075990 Amaranthus hybridus HOM05D003703 ORTHO05D004278 1.7e-18 96.7 150 40.7
MELO3C021570.2 Cucumis melo HOM05D003703 ORTHO05D004278 1.7e-18 96.7 141 40.4
Ah.04g152400 Amaranthus hybridus HOM05D003703 ORTHO05D004278 2.2e-18 96.3 155 43.2
MSTRG.19899 Avicennia marina HOM05D003703 ORTHO05D004278 4.9e-18 95.1 136 43.4
CANSAT64G0621 Cannabis sativa HOM05D003703 ORTHO05D004278 6.4e-18 94.7 154 42.9
CsaV3_5G027200 Cucumis sativus L. HOM05D003703 ORTHO05D004278 6.4e-18 94.7 141 41.1
MSTRG.6472 Avicennia marina HOM05D003703 ORTHO05D004278 8.4e-18 94.4 135 41.5
PGR004G2865 Punica granatum HOM05D003703 ORTHO05D004278 8.4e-18 94.4 142 43.7
ClCG09G019210 Citrullus lanatus HOM05D003703 ORTHO05D004278 3.2e-17 92.4 141 42.6
Lj2P370T14 Lonicera japonica HOM05D003703 ORTHO05D004278 3.2e-17 92.4 136 41.9
Dinv24085 Davidia involucrata HOM05D001227 ORTHO05D001082 7.1e-17 91.3 122 42.6
Oeu007772.1 Olea europaea HOM05D003703 ORTHO05D004278 9.3e-17 90.9 135 45.9
DCAR_017017 Daucus carota HOM05D003703 ORTHO05D004278 1.2e-16 90.5 138 42.0
Eucgr.K01832 Eucalyptus grandis HOM05D003703 ORTHO05D004278 1.2e-16 90.5 140 42.1
THA.LOC104802486 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 1.2e-16 90.5 140 40.0
TWI74G0378 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 3.5e-16 89.0 138 44.2
DCAR_017016 Daucus carota HOM05D003703 ORTHO05D004278 4.6e-16 88.6 136 41.9
SGA_v2.0_scaffold94G28431 Striga asiatica HOM05D003703 ORTHO05D004278 6.0e-16 88.2 150 41.3
Carub.0005s2479 Capsella rubella HOM05D003703 ORTHO05D004278 1.0e-15 87.4 141 36.9
Lalb_Chr18g0047801 Lupinus albus HOM05D003703 ORTHO05D004278 1.3e-15 87.0 140 41.4
SalBow1G5050 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.3e-15 87.0 136 39.0
Sed0017921 Sechium edule HOM05D003703 ORTHO05D004278 1.7e-15 86.7 141 39.7
BraA10t45001Z Brassica rapa HOM05D003703 ORTHO05D004278 2.3e-15 86.3 138 38.4
THA.LOC104826767 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 3.0e-15 85.9 138 40.6
Carub.0006s0568 Capsella rubella HOM05D003703 ORTHO05D004278 3.9e-15 85.5 152 37.5
AT3G57950 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 5.1e-15 85.1 141 39.7
Migut.J01826 Erythranthe guttata HOM05D003703 ORTHO05D004278 5.1e-15 85.1 134 39.6
Glyma.09G112700 Glycine max HOM05D003703 ORTHO05D004278 5.1e-15 85.1 145 38.6
A10p29590 Brassica napus HOM05D003703 ORTHO05D004278 6.6e-15 84.7 138 38.4
ECA248G0990 Erigeron canadensis HOM05D003703 ORTHO05D004278 6.6e-15 84.7 137 40.9
A09p50780 Brassica napus HOM05D003703 ORTHO05D004278 8.7e-15 84.3 140 37.9
C08p33500 Brassica napus HOM05D003703 ORTHO05D004278 8.7e-15 84.3 136 38.2
BolC8t50948H Brassica oleracea HOM05D003703 ORTHO05D004278 8.7e-15 84.3 136 38.2
BraA09t40525Z Brassica rapa HOM05D003703 ORTHO05D004278 8.7e-15 84.3 140 37.9
CARHR206390 Cardamine hirsuta HOM05D003703 ORTHO05D004278 1.1e-14 84.0 140 42.1
Lalb_Chr07g0188981 Lupinus albus HOM05D003703 ORTHO05D004278 1.1e-14 84.0 153 35.3
Sp5g04770 Schrenkiella parvula HOM05D003703 ORTHO05D004278 1.5e-14 83.6 141 39.7
VMungo0720G2172 Vigna mungo HOM05D003703 ORTHO05D004278 1.5e-14 83.6 139 37.4
AL5G39600 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 1.9e-14 83.2 141 39.7
Medtr7g093040 Medicago truncatula HOM05D003703 ORTHO05D004278 1.9e-14 83.2 139 41.7
Thhalv10006259m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 2.5e-14 82.8 136 39.0
Psat3g069120 Pisum sativum HOM05D003703 ORTHO05D004278 2.5e-14 82.8 139 37.4
Sp6g36065 Schrenkiella parvula HOM05D003703 ORTHO05D004278 2.5e-14 82.8 137 40.1
BcaC07g40166 Brassica carinata HOM05D003703 ORTHO05D004278 3.3e-14 82.4 140 38.6
Sc25g0005120 Simmondsia chinensis HOM05D003703 ORTHO05D004278 4.3e-14 82.0 128 44.5
A04p02830 Brassica napus HOM05D003703 ORTHO05D004278 7.3e-14 81.3 138 37.7
BraA04t16007Z Brassica rapa HOM05D003703 ORTHO05D004278 7.3e-14 81.3 138 37.7
Aa31LG10G12650 Aethionema arabicum HOM05D003703 ORTHO05D004278 9.6e-14 80.9 139 38.8
BcaB02g08287 Brassica carinata HOM05D003703 ORTHO05D004278 9.6e-14 80.9 136 37.5
Glyma.02G178400 Glycine max HOM05D003703 ORTHO05D004278 9.6e-14 80.9 143 39.2
SGA_v2.0_scaffold4546G54500 Striga asiatica HOM05D003703 ORTHO05D004278 9.6e-14 80.9 146 39.7
BcaC06g32542 Brassica carinata HOM05D003703 ORTHO05D004278 1.3e-13 80.5 146 39.7
Ca_08513_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 1.6e-13 80.1 139 38.1
Glyma.03G143800 Glycine max HOM05D003703 ORTHO05D004278 1.6e-13 80.1 143 39.2
SalBow1G5631 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.6e-13 80.1 136 36.8
THA.LOC104824607 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 2.1e-13 79.7 138 39.1
AL6G16900 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 3.6e-13 79.0 139 41.7
CDE05G1581 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 3.6e-13 79.0 121 39.7
CDE02G1004 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 6.2e-13 78.2 121 38.8
Phvul.007G258900 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 6.2e-13 78.2 139 36.7
TPR.G18214 Trifolium pratense HOM05D003703 ORTHO05D004278 6.2e-13 78.2 142 37.3
BolC4t25006H Brassica oleracea HOM05D003703 ORTHO05D004278 1.1e-12 77.4 135 36.3
ECA236G4442 Erigeron canadensis HOM05D003703 ORTHO05D004278 1.8e-12 76.6 137 39.4
AT5G06790 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 2.4e-12 76.3 135 38.5
BcaB02g08285 Brassica carinata HOM05D003703 ORTHO05D004278 2.4e-12 76.3 135 37.0
Thhalv10014619m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 2.4e-12 76.3 151 35.1
PGR142G3046 Punica granatum HOM05D003703 ORTHO05D004278 2.4e-12 76.3 144 38.2
BcaC06g32394 Brassica carinata HOM05D003703 ORTHO05D004278 3.1e-12 75.9 152 35.5
BolC9t59739H Brassica oleracea HOM05D003703 ORTHO05D004278 3.1e-12 75.9 152 35.5
Sed0013585 Sechium edule HOM05D003703 ORTHO05D004278 3.1e-12 75.9 138 40.6
C09p69970 Brassica napus HOM05D003703 ORTHO05D004278 4.0e-12 75.5 153 35.3
HanXRQChr13g0389341 Helianthus annuus HOM05D003703 ORTHO05D004278 6.9e-12 74.7 136 38.2
Psat6g128520 Pisum sativum HOM05D003703 ORTHO05D004278 6.9e-12 74.7 140 35.7
TPR.G27747 Trifolium pratense HOM05D003703 ORTHO05D004278 6.9e-12 74.7 147 35.4
Glyma.19G146900 Glycine max HOM05D003703 ORTHO05D004278 9.0e-12 74.3 146 35.6
arahy.Tifrunner.gnm1.ann1.6W7ZDH Arachis hypogaea HOM05D003703 ORTHO05D004278 1.2e-11 73.9 140 37.1
SHI16104 Sapria himalayana HOM05D003703 ORTHO05D004278 1.5e-11 73.6 139 38.1
Lj1g0027593 Lotus japonicus HOM05D003703 ORTHO05D004278 2.0e-11 73.2 135 36.3
BcaC02g09974 Brassica carinata HOM05D003703 ORTHO05D004278 2.6e-11 72.8 135 36.3
CsaV3_3G038930 Cucumis sativus L. HOM05D003703 ORTHO05D004278 4.5e-11 72.0 140 34.3
CARHR168260 Cardamine hirsuta HOM05D003703 ORTHO05D004278 5.8e-11 71.6 156 34.0
C04p34420 Brassica napus HOM05D003703 ORTHO05D004278 7.6e-11 71.2 135 35.6
ClCG10G017430 Citrullus lanatus HOM05D003703 ORTHO05D004278 7.6e-11 71.2 144 38.2
Phvul.001G141500 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 7.6e-11 71.2 144 36.8
SalBow6G1024 Salvia bowleyana HOM05D003703 ORTHO05D004278 9.9e-11 70.9 135 38.5
SalBow6G3273 Salvia bowleyana HOM05D003703 ORTHO05D004278 9.9e-11 70.9 135 38.5
VMungo1383G3663 Vigna mungo HOM05D003703 ORTHO05D004278 9.9e-11 70.9 142 35.9
BcaC02g09973 Brassica carinata HOM05D003703 ORTHO05D004278 2.2e-10 69.7 138 35.5
Lj5g0003065 Lotus japonicus HOM05D003703 ORTHO05D004278 3.8e-10 68.9 136 36.8
Eucgr.A02445 Eucalyptus grandis HOM05D003703 ORTHO05D004278 8.4e-10 67.8 139 36.0
Sc13g0002220 Simmondsia chinensis HOM05D003703 ORTHO05D004278 1.4e-09 67.0 146 38.4
Medtr1g053900 Medicago truncatula HOM05D003703 ORTHO05D004278 4.2e-09 65.5 148 33.1
Sp4g24360 Schrenkiella parvula HOM05D003703 ORTHO05D004278 5.5e-09 65.1 70 54.3
Sc19g0006980 Simmondsia chinensis HOM05D003703 ORTHO05D004278 2.7e-08 62.8 91 44.0
C04p34430 Brassica napus HOM05D003703 ORTHO05D004278 3.5e-08 62.4 136 32.4
BcaC02g12466 Brassica carinata HOM05D003703 ORTHO05D004278 4.6e-08 62.0 90 46.7
BolC4t21971H Brassica oleracea HOM05D003703 ORTHO05D004278 4.6e-08 62.0 90 46.7
AT2G42180 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 6.0e-08 61.6 76 46.1
Os09g0279200 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 6.0e-08 61.6 105 37.1
C04p03340 Brassica napus HOM05D003703 ORTHO05D004278 1.0e-07 60.8 90 45.6
BraA05t19267Z Brassica rapa HOM05D003703 ORTHO05D004278 1.0e-07 60.8 70 48.6
Ca_25700_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 1.0e-07 60.8 134 32.1
ATR0605G366 Amborella trichopoda HOM05D003703 ORTHO05D004278 1.8e-07 60.1 36 75.0
AL4G40540 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 3.0e-07 59.3 70 51.4
BcaNung04405 Brassica carinata HOM05D003703 ORTHO05D004278 3.0e-07 59.3 62 53.2
A05p02750 Brassica napus HOM05D003703 ORTHO05D004278 8.7e-07 57.8 70 47.1
Carub.0004s2452 Capsella rubella HOM05D003703 ORTHO05D004278 1.1e-06 57.4 80 43.8
Os04g0665666 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 4.3e-06 55.5 149 32.2


User provided reference genes

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