Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5477 Papaver somniferum HOM05D004228 ORTHO05D005137 5.0e-196 687.6 346 100.0
PSO170G5168 Papaver somniferum HOM05D004228 ORTHO05D005137 2.0e-189 665.6 378 90.7
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 1.5e-160 569.7 374 76.5
Nn8g40122 Nelumbo nucifera HOM05D004228 ORTHO05D005137 6.0e-157 557.8 374 74.3
Aqoxy7G02340 Aquilegia oxysepala HOM05D004228 ORTHO05D005137 2.5e-155 552.4 369 74.5
vmacro19079 Vaccinium macrocarpon HOM05D004228 ORTHO05D005137 5.6e-155 551.2 371 75.2
Rhsim08G0202500 Rhododendron simsii HOM05D004228 ORTHO05D005137 2.1e-154 549.3 370 74.6
Prupe.3G104700 Prunus persica HOM05D004228 ORTHO05D005137 2.8e-154 548.9 373 74.0
CSS0026873 Camellia sinensis var. sinensis HOM05D004228 ORTHO05D005137 1.8e-153 546.2 374 73.5
Haze_16698 Corylus avellana HOM05D004228 ORTHO05D005137 4.0e-153 545.0 371 73.6
Eucgr.J03134 Eucalyptus grandis HOM05D004228 ORTHO05D005137 5.3e-153 544.7 370 74.3
FAN14G1073 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.2e-152 543.5 374 73.3
RcHm_v2.0_Chr2g0132121 Rosa chinensis HOM05D004228 ORTHO05D005137 2.6e-152 542.3 374 73.5
Lj6g0018144 Lotus japonicus HOM05D004228 ORTHO05D005137 3.4e-152 542.0 371 73.6
ATR0789G048 Amborella trichopoda HOM05D004228 ORTHO05D005137 4.5e-152 541.6 374 73.0
Manes.11G069700 Manihot esculenta HOM05D004228 ORTHO05D005137 4.5e-152 541.6 371 74.9
Ca_13679_v3 Cicer arietinum L. HOM05D004228 ORTHO05D005137 5.8e-152 541.2 371 71.7
FvH4_6g28160 Fragaria vesca HOM05D004228 ORTHO05D005137 5.8e-152 541.2 374 73.0
Actinidia25487 Actinidia chinensis HOM05D004228 ORTHO05D005137 9.9e-152 540.4 374 73.0
GSVIVG01016092001 Vitis vinifera HOM05D004228 ORTHO05D005137 1.7e-151 539.7 373 73.2
Potri.003G185600 Populus trichocarpa HOM05D004228 ORTHO05D005137 4.9e-151 538.1 370 73.5
Potri.003G185951 Populus trichocarpa HOM05D004228 ORTHO05D005137 6.4e-151 537.7 370 73.5
Potri.003G185776 Populus trichocarpa HOM05D004228 ORTHO05D005137 8.4e-151 537.3 370 73.2
MSTRG.13911 Avicennia marina HOM05D004228 ORTHO05D005137 1.4e-150 536.6 371 73.6
Lalb_Chr18g0048351 Lupinus albus HOM05D004228 ORTHO05D005137 1.9e-150 536.2 371 71.4
FAN09G0969 Fragaria x ananassa HOM05D004228 ORTHO05D005137 3.2e-150 535.4 374 72.2
Lsat_1_v5_gn_6_17241 Lactuca sativa HOM05D004228 ORTHO05D005137 3.2e-150 535.4 376 72.1
Medtr3g437740 Medicago truncatula HOM05D004228 ORTHO05D005137 4.2e-150 535.0 371 70.9
HanXRQChr17g0558091 Helianthus annuus HOM05D004228 ORTHO05D005137 7.1e-150 534.3 373 72.7
Atru.chr1.2817 Acer truncatum HOM05D004228 ORTHO05D005137 1.6e-149 533.1 374 72.5
Cc08_g05800 Coffea canephora HOM05D004228 ORTHO05D005137 4.6e-149 531.6 371 73.0
CiPaw.02G164000 Carya illinoinensis HOM05D004228 ORTHO05D005137 1.8e-148 529.6 371 71.7
Dinv21435 Davidia involucrata HOM05D004228 ORTHO05D005137 1.8e-148 529.6 371 73.0
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 2.3e-148 529.3 373 71.8
HanXRQChr13g0411161 Helianthus annuus HOM05D004228 ORTHO05D005137 3.0e-148 528.9 374 71.9
Glyma.13G072500 Glycine max HOM05D004228 ORTHO05D005137 5.1e-148 528.1 371 70.9
Oeu057157.1 Olea europaea HOM05D004228 ORTHO05D005137 6.7e-148 527.7 376 69.9
Sabra03G0135800 Salix brachista HOM05D004228 ORTHO05D005137 6.7e-148 527.7 370 72.4
Migut.E01375 Erythranthe guttata HOM05D004228 ORTHO05D005137 8.7e-148 527.3 375 70.4
Sed0017026 Sechium edule HOM05D004228 ORTHO05D005137 1.5e-147 526.6 372 71.5
Sopen08g024020 Solanum pennellii HOM05D004228 ORTHO05D005137 2.5e-147 525.8 371 72.2
VMungo0540G0565 Vigna mungo HOM05D004228 ORTHO05D005137 2.5e-147 525.8 372 70.2
Phvul.006G018900 Phaseolus vulgaris HOM05D004228 ORTHO05D005137 3.3e-147 525.4 371 70.4
TWI12G1267 Tripterygium wilfordii HOM05D004228 ORTHO05D005137 3.3e-147 525.4 373 72.1
Lsat_1_v5_gn_3_53241 Lactuca sativa HOM05D004228 ORTHO05D005137 4.3e-147 525.0 371 71.4
Ciclev10024933m.g Citrus clementina HOM05D004228 ORTHO05D005137 5.6e-147 524.6 371 70.9
Solyc08g075390.4 Solanum lycopersicum HOM05D004228 ORTHO05D005137 7.4e-147 524.2 371 72.2
CANSAT64G2586 Cannabis sativa HOM05D004228 ORTHO05D005137 9.6e-147 523.9 364 70.9
Psat4g022640 Pisum sativum HOM05D004228 ORTHO05D005137 1.3e-146 523.5 371 69.3
Os02g0793300 Oryza sativa ssp. japonica HOM05D004228 ORTHO05D005137 2.8e-146 522.3 374 68.7
THA.LOC104813593 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 3.7e-146 521.9 371 69.8
arahy.Tifrunner.gnm1.ann1.1BZV33 Arachis hypogaea HOM05D004228 ORTHO05D005137 6.2e-146 521.2 356 73.3
HPP92_017167 Vanilla planifolia HOM05D004228 ORTHO05D005137 1.1e-145 520.4 373 68.9
CAN.G930.1 Capsicum annuum HOM05D004228 ORTHO05D005137 4.0e-145 518.5 371 70.6
EL10Ac8g19421 Beta vulgaris HOM05D004228 ORTHO05D005137 5.3e-145 518.1 372 70.4
DCAR_002193 Daucus carota HOM05D004228 ORTHO05D005137 5.3e-145 518.1 371 70.6
Ah.09g231750 Amaranthus hybridus HOM05D004228 ORTHO05D005137 9.0e-145 517.3 372 70.7
Nitab4.5_0000030g0500 Nicotiana tabacum HOM05D004228 ORTHO05D005137 1.2e-144 516.9 371 70.4
Zm00001eb192570 Zea mays HOM05D004228 ORTHO05D005137 3.4e-144 515.4 372 69.1
CARHR073460 Cardamine hirsuta HOM05D004228 ORTHO05D005137 5.8e-144 514.6 372 68.5
arahy.Tifrunner.gnm1.ann1.GHRN5T Arachis hypogaea HOM05D004228 ORTHO05D005137 1.7e-143 513.1 370 68.9
DCAR_030908 Daucus carota HOM05D004228 ORTHO05D005137 2.2e-143 512.7 371 69.0
Nitab4.5_0002244g0120 Nicotiana tabacum HOM05D004228 ORTHO05D005137 2.2e-143 512.7 371 70.4
Thhalv10018131m.g Eutrema salsugineum HOM05D004228 ORTHO05D005137 4.9e-143 511.5 372 68.5
ECA240G4106 Erigeron canadensis HOM05D004228 ORTHO05D005137 6.5e-143 511.1 368 71.2
CsaV3_7G031760 Cucumis sativus L. HOM05D004228 ORTHO05D003934 1.1e-142 510.4 373 68.9
MELO3C023478.2 Cucumis melo HOM05D004228 ORTHO05D005137 1.4e-142 510.0 375 69.3
Gohir.A10G000600 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.4e-142 510.0 371 69.5
AT1G79690 Arabidopsis thaliana HOM05D004228 ORTHO05D005137 1.9e-142 509.6 372 67.7
Duzib160G0712 Durio zibethinus HOM05D004228 ORTHO05D005137 1.9e-142 509.6 366 71.0
Carub.0002s2655 Capsella rubella HOM05D004228 ORTHO05D005137 2.5e-142 509.2 372 67.7
VMungo1080G1878 Vigna mungo HOM05D004228 ORTHO05D005137 2.5e-142 509.2 371 68.7
THA.LOC104808168 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 3.2e-142 508.8 372 67.7
BcaNung04171 Brassica carinata HOM05D004228 ORTHO05D005137 5.5e-142 508.1 372 68.3
C06p29710 Brassica napus HOM05D004228 ORTHO05D005137 5.5e-142 508.1 372 68.3
BolC6t38132H Brassica oleracea HOM05D004228 ORTHO05D005137 5.5e-142 508.1 372 68.3
Sp5g34750 Schrenkiella parvula HOM05D004228 ORTHO05D005137 5.5e-142 508.1 372 67.5
AL2G40390 Arabidopsis lyrata HOM05D004228 ORTHO05D005137 7.1e-142 507.7 372 67.7
CsaV3_7G031770 Cucumis sativus L. HOM05D004228 ORTHO05D005137 7.1e-142 507.7 356 72.5
Gohir.D10G000700 Gossypium hirsutum HOM05D004228 ORTHO05D005137 7.1e-142 507.7 371 69.3
ECA240G2553 Erigeron canadensis HOM05D004228 ORTHO05D005137 9.3e-142 507.3 371 69.5
Peaxi162Scf00193g00726 Petunia axillaris HOM05D004228 ORTHO05D005137 9.3e-142 507.3 371 69.8
Thecc.06G048200 Theobroma cacao HOM05D004228 ORTHO05D005137 9.3e-142 507.3 371 69.5
MELO3C023481.2 Cucumis melo HOM05D004228 ORTHO05D005137 1.2e-141 506.9 373 68.1
BraA07t30343Z Brassica rapa HOM05D004228 ORTHO05D005137 3.5e-141 505.4 372 67.7
MELO3C023479.2 Cucumis melo HOM05D004228 ORTHO05D005137 3.5e-141 505.4 358 71.8
CsaV3_7G031780 Cucumis sativus L. HOM05D004228 ORTHO05D005137 3.5e-141 505.4 375 68.5
Gorai.011G001100 Gossypium raimondii HOM05D004228 ORTHO05D005137 7.9e-141 504.2 372 69.4
SGA_v2.0_scaffold121G33058 Striga asiatica HOM05D004228 ORTHO05D005137 7.9e-141 504.2 388 66.5
A07p26990 Brassica napus HOM05D004228 ORTHO05D005137 1.0e-140 503.8 372 67.5
BcaB02g07234 Brassica carinata HOM05D004228 ORTHO05D005137 1.8e-140 503.1 372 67.5
ClCG09G003440 Citrullus lanatus HOM05D004228 ORTHO05D005137 1.8e-140 503.1 356 71.1
arahy.Tifrunner.gnm1.ann1.XEX8KQ Arachis hypogaea HOM05D004228 ORTHO05D005137 2.3e-140 502.7 370 67.8
Aa31LG4G1300 Aethionema arabicum HOM05D004228 ORTHO05D005137 5.1e-140 501.5 368 67.9
A07p44700 Brassica napus HOM05D004228 ORTHO05D005137 5.7e-139 498.0 372 66.7
BraA07t31978Z Brassica rapa HOM05D004228 ORTHO05D005137 1.6e-138 496.5 372 66.4
BolC6t40368H Brassica oleracea HOM05D004228 ORTHO05D005137 2.2e-138 496.1 372 66.4
C06p53520 Brassica napus HOM05D004228 ORTHO05D005137 3.7e-138 495.4 372 66.1
BcaB02g08706 Brassica carinata HOM05D004228 ORTHO05D005137 6.3e-138 494.6 372 65.9
BcaC08g47528 Brassica carinata HOM05D004228 ORTHO05D005137 1.1e-137 493.8 372 66.1
ATR0580G052 Amborella trichopoda HOM05D004228 ORTHO05D005137 6.9e-137 491.1 373 66.0
AUR62002649 Chenopodium quinoa HOM05D004228 ORTHO05D005137 1.7e-135 486.5 382 65.7
Pp3c5_190 Physcomitrium patens HOM05D004228 ORTHO05D005137 9.3e-134 480.7 370 65.1
FAN02G0630 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.8e-132 476.5 374 65.8
SMO337G0028 Selaginella moellendorffii HOM05D004228 ORTHO05D005137 6.9e-129 464.5 369 61.8
unitig_37.g12907 Utricularia gibba HOM05D004228 ORTHO05D005137 8.5e-127 457.6 347 67.1
Mapoly0059s0059 Marchantia polymorpha HOM05D004228 ORTHO05D005137 2.5e-126 456.1 364 63.7
Lsat_1_v5_gn_0_21180 Lactuca sativa HOM05D004228 ORTHO05D005137 2.2e-122 443.0 307 71.3
MD17G1227300 Malus domestica HOM05D004228 ORTHO05D005137 8.8e-116 421.0 356 62.4
Actinidia18265 Actinidia chinensis HOM05D004228 ORTHO05D005137 1.4e-113 413.7 276 75.0
MBI14_g16439_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 4.1e-113 412.1 258 79.5
COL.COLO4_26790 Corchorus olitorius HOM05D004228 ORTHO05D005137 2.3e-100 369.8 247 74.9
AUR62034058 Chenopodium quinoa HOM05D004228 ORTHO05D005137 6.8e-100 368.2 359 57.9
AagrBONN_evm.TU.Sc2ySwM_117.2286 Anthoceros agrestis HOM05D004228 ORTHO05D005137 3.4e-99 365.9 302 61.9
Lsat_1_v5_gn_0_21260 Lactuca sativa HOM05D004228 ORTHO05D005137 2.0e-96 356.7 263 69.2
MD09G1228800 Malus domestica HOM05D004228 ORTHO05D005137 2.0e-75 287.0 234 62.8
RcHm_v2.0_Chr2g0132171 Rosa chinensis HOM05D004228 ORTHO05D005137 1.5e-70 270.8 278 56.5
MD00G1188200 Malus domestica HOM05D004228 ORTHO05D005137 1.9e-70 270.4 222 62.6
Lsat_1_v5_gn_6_87921 Lactuca sativa HOM05D004228 ORTHO05D005137 6.4e-58 228.8 214 59.3
Glyma.20G046501 Glycine max HOM05D004228 ORTHO05D005137 2.9e-50 203.4 118 78.8
CBR_g49132 Chara braunii HOM05D004228 ORTHO05D005137 2.0e-43 180.6 149 59.7
Cfa001845 Carpinus fangiana HOM05D004228 ORTHO05D005137 1.6e-40 171.0 117 71.8
SEGI_17966 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 1.8e-39 167.5 119 67.2
SEGI_21553 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 9.6e-38 161.8 101 74.3
SEGI_32687 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 1.6e-37 161.0 116 65.5
Hma1.2p1_0338F.1_g129690 Hydrangea macrophylla HOM05D004228 ORTHO05D005137 2.8e-37 160.2 113 71.7
Cpa.g.sc167.19 Carica papaya HOM05D004228 ORTHO05D005137 1.4e-36 157.9 107 72.0
Glyma.20G046401 Glycine max HOM05D004228 ORTHO05D005137 9.3e-33 145.2 92 77.2
CBR_g49131 Chara braunii HOM05D007088 ORTHO05D008477 1.1e-30 138.3 92 69.6
CDE02G2004 Ceratophyllum demersum HOM05D004228 ORTHO05D005137 1.8e-28 131.0 104 66.3
Lsat_1_v5_gn_5_149700 Lactuca sativa HOM05D004228 ORTHO05D016156 3.9e-15 86.7 86 55.8
arahy.Tifrunner.gnm1.ann1.W5V7W0 Arachis hypogaea HOM05D004228 ORTHO05D005137 9.1e-12 75.5 44 81.8
Lsat_1_v5_gn_4_114980 Lactuca sativa HOM05D004228 ORTHO05D005137 1.1e-06 58.5 56 57.1


User provided reference genes

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