Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 9.1e-128 460.3 240 100.0
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 2.2e-118 429.1 247 93.1
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 8.6e-78 294.3 229 65.5
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 1.6e-76 290.0 234 63.2
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 1.6e-71 273.5 230 63.9
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 1.0e-70 270.8 218 63.3
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 1.9e-69 266.5 229 60.7
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 1.1e-67 260.8 230 59.1
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 6.8e-67 258.1 233 57.1
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 3.4e-66 255.8 229 60.3
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 9.9e-66 254.2 230 58.7
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 2.2e-65 253.1 229 55.9
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 1.9e-64 250.0 229 57.2
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 2.4e-64 249.6 228 55.3
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 3.2e-64 249.2 228 57.9
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 5.4e-64 248.4 234 56.8
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 7.1e-64 248.1 230 58.3
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 9.2e-64 247.7 230 55.2
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 9.2e-64 247.7 229 55.5
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 9.2e-64 247.7 233 53.6
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 1.2e-63 247.3 228 55.7
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 1.2e-63 247.3 228 54.8
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 2.1e-63 246.5 204 62.7
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 6.0e-63 245.0 230 55.7
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 3.9e-62 242.3 228 55.7
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 3.9e-62 242.3 230 55.2
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 3.9e-62 242.3 230 55.7
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 8.6e-62 241.1 229 53.7
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 1.5e-61 240.4 204 59.8
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 5.6e-61 238.4 208 58.7
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 9.6e-61 237.7 230 54.3
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 2.1e-60 236.5 205 60.5
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 2.1e-60 236.5 228 52.2
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 6.2e-60 235.0 230 53.5
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 8.1e-60 234.6 229 55.9
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 1.4e-59 233.8 229 53.7
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 1.4e-59 233.8 229 54.1
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 1.8e-59 233.4 226 54.0
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 4.0e-59 232.3 227 54.2
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 8.9e-59 231.1 231 55.4
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 2.6e-58 229.6 231 53.2
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 4.4e-58 228.8 224 54.5
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 5.8e-58 228.4 231 55.0
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 9.9e-58 227.6 224 54.5
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 9.9e-58 227.6 227 55.5
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 9.9e-58 227.6 207 57.5
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 1.7e-57 226.9 230 54.3
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 3.8e-57 225.7 172 65.1
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 4.9e-57 225.3 230 52.6
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 1.1e-56 224.2 228 49.6
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 2.1e-55 219.9 218 53.7
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 6.0e-55 218.4 208 54.3
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 6.0e-55 218.4 224 51.3
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 8.1e-52 208.0 191 55.0
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 5.3e-51 205.3 233 50.2
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 1.5e-50 203.8 206 47.6
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 5.8e-50 201.8 207 51.2
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 1.7e-49 200.3 233 44.6
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 2.9e-49 199.5 233 45.9
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.9e-48 196.8 176 58.5
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.9e-48 196.8 176 58.5
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 2.7e-47 193.0 194 52.1
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.3e-46 189.9 204 51.5
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 6.7e-46 188.3 171 55.6
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 2.2e-41 173.3 133 62.4
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 7.1e-40 168.3 204 46.1
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 3.0e-38 162.9 166 47.6
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 2.5e-37 159.8 229 42.8
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 1.3e-36 157.5 229 41.5
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 1.4e-35 154.1 162 50.6
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 3.4e-34 149.4 161 53.4
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 4.5e-34 149.1 141 54.6
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.7e-33 147.1 122 61.5
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.7e-33 147.1 122 61.5
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.7e-33 147.1 111 64.9
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.9e-32 143.7 139 53.2
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.6e-31 140.6 117 58.1
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.6e-31 140.6 117 58.1
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 2.1e-31 140.2 129 56.6
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 3.0e-30 136.3 111 59.5
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 3.9e-30 136.0 227 40.1
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 4.3e-29 132.5 112 57.1
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 1.6e-28 130.6 117 59.0
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 1.6e-28 130.6 131 55.7
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.2e-28 130.2 139 49.6
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 2.2e-28 130.2 111 57.7
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 1.4e-27 127.5 194 40.7
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 4.1e-27 125.9 115 57.4
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.9e-24 117.1 103 56.3
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 2.5e-24 116.7 114 51.8
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 7.2e-24 115.2 108 53.7
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 7.9e-23 111.7 238 29.4
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 2.5e-21 106.7 91 57.1
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.3e-20 102.1 65 70.8
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 6.9e-19 98.6 186 31.2
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 2.6e-18 96.7 73 65.8
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 5.0e-17 92.4 100 45.0
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 6.5e-17 92.0 63 68.3
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 9.4e-16 88.2 75 58.7
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 2.1e-15 87.0 91 45.1
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.0e-14 84.7 101 40.6
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 3.1e-11 73.2 79 50.6
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 2.1e-07 60.5 81 33.3


User provided reference genes

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