Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5422 Papaver somniferum HOM05D037519 ORTHO05D037279 0.0e+00 1610.5 871 100.0
PSO063G0130 Papaver somniferum HOM05D037519 ORTHO05D037279 0.0e+00 1514.6 873 94.3
PSO017G6249 Papaver somniferum HOM05D037519 ORTHO05D037279 3.7e-70 270.8 663 39.7
TAR636G0994 Trochodendron aralioides HOM05D005839 ORTHO05D005686 1.7e-35 155.6 1040 27.1
TAR636G1565 Trochodendron aralioides HOM05D005839 ORTHO05D005686 1.7e-35 155.6 1043 26.8
Nitab4.5_0000037g0160 Nicotiana tabacum HOM05D005839 ORTHO05D005686 3.2e-21 108.2 976 24.5
CAN.G1684.4 Capsicum annuum HOM05D005839 ORTHO05D005686 1.1e-18 99.8 985 23.8
Peaxi162Scf00286g00911 Petunia axillaris HOM05D005839 ORTHO05D005686 2.5e-18 98.6 1037 23.8
Eucgr.H02631 Eucalyptus grandis HOM05D005839 ORTHO05D005686 1.8e-16 92.4 1038 23.2
Sopen09g035450 Solanum pennellii HOM05D005839 ORTHO05D005686 1.2e-15 89.7 997 23.0
Actinidia28516 Actinidia chinensis HOM05D005839 ORTHO05D005686 3.4e-15 88.2 1012 24.2
TAR365G0636 Trochodendron aralioides HOM05D005839 ORTHO05D005686 3.4e-15 88.2 592 27.0
Haze_11680 Corylus avellana HOM05D005839 ORTHO05D005686 7.6e-15 87.0 484 27.9
Aqoxy2G04047 Aquilegia oxysepala HOM05D005839 ORTHO05D005686 2.2e-14 85.5 1021 24.5
Thecc.04G191800 Theobroma cacao HOM05D005839 ORTHO05D005686 1.1e-13 83.2 1106 22.9
Solyc09g092550.4 Solanum lycopersicum HOM05D005839 ORTHO05D005686 3.2e-13 81.6 991 22.3
PGSC0003DMG401021870 Solanum tuberosum HOM05D005839 ORTHO05D005686 4.6e-12 77.8 1043 22.6
FvH4_4g12870 Fragaria vesca HOM05D005839 ORTHO05D005686 1.3e-11 76.3 332 30.1
FAN12G3285 Fragaria x ananassa HOM05D005839 ORTHO05D005686 1.3e-11 76.3 332 30.1
Duzib151G0277 Durio zibethinus HOM05D005839 ORTHO05D005686 8.7e-11 73.6 327 28.7
Hma1.2p1_1457F.1_g284680 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 1.5e-10 72.8 318 30.5
EL10Ac3g07436 Beta vulgaris HOM05D005839 ORTHO05D005686 1.9e-10 72.4 984 24.1
Glyma.08G107100 Glycine max HOM05D005839 ORTHO05D005686 1.9e-10 72.4 1111 21.9
Ah.04g149590 Amaranthus hybridus HOM05D005839 ORTHO05D005686 3.3e-10 71.6 965 23.8
Ca_18007_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 1.6e-09 69.3 978 22.9
Hma1.2p1_0984F.1_g244280 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 8.1e-09 67.0 313 31.0
PGSC0003DMG400021878 Solanum tuberosum HOM05D005839 ORTHO05D005686 1.1e-08 66.6 250 30.4
Cc03_g09160 Coffea canephora HOM05D005839 ORTHO05D005686 1.8e-08 65.9 1137 22.4
Cpa.g.sc157.18 Carica papaya HOM05D005839 ORTHO05D005686 2.4e-08 65.5 37 73.0
Sabra14G0109900 Salix brachista HOM05D005839 ORTHO05D005686 2.4e-08 65.5 780 24.4
arahy.Tifrunner.gnm1.ann1.CIA2YT Arachis hypogaea HOM05D005839 ORTHO05D005686 4.0e-08 64.7 52 50.0
CANSAT78G1593 Cannabis sativa HOM05D005839 ORTHO05D005686 4.0e-08 64.7 963 23.3
FAN22G0032 Fragaria x ananassa HOM05D005839 ORTHO05D005686 6.9e-08 63.9 329 28.9
Phvul.003G048600 Phaseolus vulgaris HOM05D005839 ORTHO05D005686 6.9e-08 63.9 257 28.0
MD04G1021500 Malus domestica HOM05D005839 ORTHO05D005686 9.0e-08 63.5 1029 22.9
Oeu049072.1 Olea europaea HOM05D005839 ORTHO05D005686 9.0e-08 63.5 968 23.9
Migut.G00951 Erythranthe guttata HOM05D005839 ORTHO05D005686 1.2e-07 63.2 513 23.4
Prupe.1G170500 Prunus persica HOM05D005839 ORTHO05D005686 1.2e-07 63.2 1075 21.7
QL06p027171 Quercus lobata HOM05D005839 ORTHO05D005686 1.2e-07 63.2 1117 22.9
arahy.Tifrunner.gnm1.ann1.3YD71H Arachis hypogaea HOM05D005839 ORTHO05D005686 2.0e-07 62.4 1124 21.4
Dinv32166 Davidia involucrata HOM05D005839 ORTHO05D005686 2.0e-07 62.4 753 24.4
Gorai.006G225000 Gossypium raimondii HOM05D005839 ORTHO05D005686 2.0e-07 62.4 972 24.0
CiPaw.01G113800 Carya illinoinensis HOM05D005839 ORTHO05D005686 4.5e-07 61.2 776 25.4
FvH4_1g13820 Fragaria vesca HOM05D005839 ORTHO05D005686 5.8e-07 60.8 51 52.9
Lj6g0025267 Lotus japonicus HOM05D005839 ORTHO05D005686 5.8e-07 60.8 40 55.0
RcHm_v2.0_Chr4g0412531 Rosa chinensis HOM05D005839 ORTHO05D005686 5.8e-07 60.8 436 23.6
AUR62020882 Chenopodium quinoa HOM05D005839 ORTHO05D005686 7.6e-07 60.5 489 24.9
Sed0009973 Sechium edule HOM05D005839 ORTHO05D005686 7.6e-07 60.5 1072 21.8
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 7.6e-07 60.5 1003 21.8
Actinidia35832 Actinidia chinensis HOM05D005839 ORTHO05D005686 9.9e-07 60.1 650 24.0
Hund19024 Selenicereus undatus HOM05D005839 ORTHO05D005686 9.9e-07 60.1 947 21.9
MELO3C006781.2 Cucumis melo HOM05D005839 ORTHO05D005686 1.7e-06 59.3 1056 22.4
Gorai.005G128100 Gossypium raimondii HOM05D005839 ORTHO05D005686 2.2e-06 58.9 313 25.9
BcaC01g00210 Brassica carinata HOM05D010750 ORTHO05D005686 2.9e-06 58.5 33 66.7
A08p24270 Brassica napus HOM05D010750 ORTHO05D005686 2.9e-06 58.5 33 66.7
BolC3t19949H Brassica oleracea HOM05D010750 ORTHO05D005686 2.9e-06 58.5 33 66.7
BraA08t34382Z Brassica rapa HOM05D010750 ORTHO05D005686 2.9e-06 58.5 33 66.7
Duzib268G0552 Durio zibethinus HOM05D005839 ORTHO05D005686 2.9e-06 58.5 1151 22.2
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 2.9e-06 58.5 206 28.2
Aa31LG9G3190 Aethionema arabicum HOM05D010750 ORTHO05D005686 4.9e-06 57.8 46 50.0
C03p76940 Brassica napus HOM05D010750 ORTHO05D005686 4.9e-06 57.8 53 50.9
Lalb_Chr07g0186961 Lupinus albus HOM05D005839 ORTHO05D005686 4.9e-06 57.8 51 56.9
Gohir.D02G113200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 6.4e-06 57.4 362 25.4
CSS0003065 Camellia sinensis var. sinensis HOM05D005839 ORTHO05D005686 8.4e-06 57.0 1036 22.8
CsaV3_3G015820 Cucumis sativus L. HOM05D005839 ORTHO05D005686 8.4e-06 57.0 1080 23.1
Gorai.011G150900 Gossypium raimondii HOM05D005839 ORTHO05D005686 8.4e-06 57.0 957 21.6


User provided reference genes

Program Settings