Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 0.0e+00 1094.0 556 100.0
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 2.7e-308 1061.2 555 97.3
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 1.5e-290 1002.3 555 91.4
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 7.2e-245 850.5 562 77.9
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 7.2e-237 823.9 561 76.6
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 2.8e-233 812.0 579 71.8
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 3.1e-232 808.5 582 71.0
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 1.6e-231 806.2 561 74.3
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 4.3e-229 798.1 562 73.0
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 4.3e-229 798.1 561 73.8
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 1.6e-228 796.2 561 71.8
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 1.8e-227 792.7 560 73.0
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 1.2e-226 790.0 562 71.9
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 1.5e-226 789.6 561 72.2
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 1.5e-226 789.6 561 72.0
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 2.6e-226 788.9 562 72.2
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 9.8e-226 786.9 561 71.7
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 1.4e-224 783.1 562 70.5
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 5.4e-224 781.2 562 71.0
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 9.2e-224 780.4 562 70.5
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 1.2e-223 780.0 561 71.8
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 2.0e-223 779.2 569 70.7
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 2.0e-223 779.2 560 70.9
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 3.5e-223 778.5 562 70.3
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 7.8e-223 777.3 561 70.1
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 1.7e-222 776.2 535 73.8
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 1.7e-222 776.2 562 70.8
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 2.3e-222 775.8 562 70.6
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 3.9e-222 775.0 562 69.9
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 3.9e-222 775.0 562 70.5
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 5.0e-222 774.6 560 70.2
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 1.5e-221 773.1 556 70.3
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 1.5e-221 773.1 556 70.3
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 1.9e-221 772.7 561 70.6
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 1.2e-220 770.0 561 70.4
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 2.1e-220 769.2 556 71.0
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 8.0e-220 767.3 560 70.0
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 8.0e-220 767.3 561 69.7
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 1.4e-219 766.5 561 69.7
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 2.3e-219 765.8 556 69.2
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 2.3e-219 765.8 561 70.1
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 6.8e-219 764.2 561 69.9
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 2.6e-218 762.3 561 70.6
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 4.4e-218 761.5 561 69.0
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 7.5e-218 760.8 562 68.7
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.3e-217 760.0 562 69.9
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 3.7e-217 758.4 561 69.2
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 3.7e-217 758.4 561 69.5
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 4.9e-217 758.1 561 69.9
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 6.4e-217 757.7 579 67.7
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 6.4e-217 757.7 562 68.9
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 1.4e-216 756.5 590 66.8
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 4.1e-216 755.0 562 68.7
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 3.5e-215 751.9 561 68.8
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 7.8e-215 750.7 555 69.7
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 7.8e-215 750.7 561 69.9
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 1.3e-214 750.0 555 69.5
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 1.7e-214 749.6 556 69.6
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 3.0e-214 748.8 555 70.8
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 3.0e-214 748.8 563 68.7
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 6.6e-214 747.7 540 72.0
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 1.9e-213 746.1 583 67.2
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.6e-213 744.6 581 66.6
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 7.3e-213 744.2 559 68.9
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 2.1e-212 742.7 571 67.8
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 3.1e-211 738.8 554 66.6
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 2.0e-210 736.1 558 68.1
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 7.5e-210 734.2 562 68.0
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 9.8e-210 733.8 561 67.0
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 4.9e-209 731.5 559 66.2
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.4e-208 729.9 561 67.7
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.9e-208 729.6 561 67.7
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 2.4e-208 729.2 562 68.1
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 2.4e-208 729.2 561 67.9
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 2.4e-208 729.2 558 66.8
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 3.2e-208 728.8 553 66.7
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 7.1e-208 727.6 560 67.9
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 9.2e-208 727.2 570 67.5
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 2.3e-206 722.6 519 70.7
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 5.1e-206 721.5 556 68.7
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 8.6e-206 720.7 557 66.8
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 3.3e-205 718.8 555 65.6
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 3.3e-205 718.8 552 65.8
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 2.8e-204 715.7 552 65.4
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 3.6e-204 715.3 555 66.1
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 1.8e-203 713.0 558 66.1
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 8.9e-203 710.7 563 66.3
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 1.5e-202 709.9 554 65.7
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 2.0e-202 709.5 554 65.5
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 1.3e-201 706.8 522 68.4
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 3.8e-201 705.3 562 66.5
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 4.9e-201 704.9 558 65.1
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 2.1e-199 699.5 534 68.0
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 4.6e-199 698.4 555 64.3
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 7.8e-199 697.6 499 72.1
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.0e-198 697.2 556 65.8
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 5.1e-198 694.9 552 64.7
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 3.3e-197 692.2 556 64.9
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 4.3e-197 691.8 552 64.5
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 1.6e-196 689.9 551 64.6
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 6.2e-196 688.0 500 69.6
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.1e-195 687.2 494 70.0
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 6.9e-195 684.5 560 64.6
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 6.4e-193 677.9 553 63.5
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 6.4e-193 677.9 553 63.5
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 9.3e-192 674.1 556 62.4
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 1.5e-189 666.8 550 62.2
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 3.3e-189 665.6 496 67.3
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 4.9e-185 651.7 537 60.5
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 7.1e-184 647.9 546 63.0
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 9.0e-179 630.9 555 60.4
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 3.0e-166 589.3 561 56.7
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 2.6e-162 576.2 429 70.2
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 1.8e-158 563.5 555 54.4
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 4.3e-157 558.9 564 54.4
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 2.6e-154 549.7 576 52.1
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 9.4e-152 541.2 444 62.8
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 6.1e-151 538.5 543 54.0
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 7.9e-151 538.1 508 58.9
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 7.4e-149 531.6 405 65.9
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 1.0e-145 521.2 457 60.2
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 3.8e-145 519.2 403 68.2
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 8.8e-142 508.1 362 72.9
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 6.8e-118 428.7 533 48.6
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 1.1e-112 411.4 414 56.5
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 2.8e-111 406.8 584 42.3
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 4.0e-110 402.9 282 74.1
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 2.0e-109 400.6 298 70.5
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 1.1e-102 378.3 564 44.0
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 1.4e-102 377.9 539 43.2
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 3.0e-73 280.4 199 69.3
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 9.0e-70 268.9 481 39.3
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 1.1e-56 225.3 367 43.1
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 1.5e-53 214.9 280 45.4
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 9.7e-48 195.7 142 71.1
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.3e-44 185.3 264 43.6
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 1.9e-43 181.4 142 67.6
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 8.8e-41 172.6 147 57.8
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 9.1e-38 162.5 192 52.6
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 1.7e-36 158.3 114 64.9
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 3.0e-33 147.5 100 69.0
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 8.8e-33 146.0 111 69.4
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 3.1e-30 137.5 108 61.1
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 5.0e-28 130.2 127 56.7
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 1.1e-22 112.5 85 64.7
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 1.1e-19 102.4 76 63.2
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 9.4e-19 99.4 120 49.2
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 4.0e-17 94.0 205 32.2
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 2.2e-15 88.2 88 58.0
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 4.8e-15 87.0 73 58.9


User provided reference genes

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