Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5357 Papaver somniferum HOM05D066249 ORTHO05D009358 2.8e-258 894.8 462 100.0
PSO675G1581 Papaver somniferum HOM05D066249 ORTHO05D009358 3.0e-244 848.2 462 95.2
TAR636G0036 Trochodendron aralioides HOM05D008235 ORTHO05D009358 3.9e-26 123.6 320 34.4
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 8.1e-24 115.9 404 33.7
Nn1g09629 Nelumbo nucifera HOM05D008235 ORTHO05D009358 2.4e-23 114.4 404 31.9
Aqoxy2G04121 Aquilegia oxysepala HOM05D008235 ORTHO05D009358 1.5e-22 111.7 381 34.6
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 3.9e-18 97.1 372 29.0
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 5.1e-18 96.7 378 29.4
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 3.4e-14 84.0 382 30.4
MD04G1040900 Malus domestica HOM05D008235 ORTHO05D009358 5.8e-14 83.2 378 27.0
VMungo1127G1046 Vigna mungo HOM05D008235 ORTHO05D009358 9.9e-14 82.4 377 25.7
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 1.4e-12 78.6 397 29.0
Phvul.011G054200 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 1.9e-12 78.2 385 26.8
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 4.2e-12 77.0 387 28.4
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 7.1e-12 76.3 390 29.2
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 1.2e-11 75.5 389 28.8
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 3.0e-10 70.9 324 29.6
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.1e-09 68.9 88 43.2
Duzib268G0443 Durio zibethinus HOM05D008235 ORTHO05D009358 4.3e-09 67.0 79 41.8
vmacro00622 Vaccinium macrocarpon HOM05D008235 ORTHO05D009358 4.3e-09 67.0 116 39.7
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 7.3e-09 66.2 384 28.1
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 7.3e-09 66.2 157 35.0
RhsimUnG0195000 Rhododendron simsii HOM05D008235 ORTHO05D009358 7.3e-09 66.2 157 35.0
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 9.6e-09 65.9 289 30.1
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 1.3e-08 65.5 83 42.2
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.3e-08 65.5 104 38.5
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 1.6e-08 65.1 384 27.1
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 2.8e-08 64.3 324 29.6
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 2.8e-08 64.3 149 35.6
Glyma.11G127600 Glycine max HOM05D008235 ORTHO05D009358 3.6e-08 63.9 365 24.9
Lj3g0014084 Lotus japonicus HOM05D008235 ORTHO05D009358 3.6e-08 63.9 405 26.4
arahy.Tifrunner.gnm1.ann1.TK6P88 Arachis hypogaea HOM05D008235 ORTHO05D009358 6.2e-08 63.2 399 25.6
arahy.Tifrunner.gnm1.ann1.V6VI7P Arachis hypogaea HOM05D008235 ORTHO05D009358 1.1e-07 62.4 396 24.7
Glyma.13G344300 Glycine max HOM05D008235 ORTHO05D009358 1.4e-07 62.0 293 30.0
Lalb_Chr22g0352131 Lupinus albus HOM05D008235 ORTHO05D009358 1.4e-07 62.0 404 27.2
Glyma.12G052200 Glycine max HOM05D008235 ORTHO05D009358 5.3e-07 60.1 327 26.9
Gohir.D02G114100 Gossypium hirsutum HOM05D008235 ORTHO05D009358 2.0e-06 58.2 389 27.8
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 2.6e-06 57.8 324 26.2
Cpa.g.sc9.283 Carica papaya HOM05D008235 ORTHO05D009358 2.6e-06 57.8 77 42.9
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 2.6e-06 57.8 410 27.3
Gohir.A03G088800 Gossypium hirsutum HOM05D008235 ORTHO05D009358 4.5e-06 57.0 438 26.7
Actinidia35979 Actinidia chinensis HOM05D008235 ORTHO05D009358 5.8e-06 56.6 399 26.1
THA.LOC104803712 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 9.9e-06 55.8 125 34.4


User provided reference genes

Program Settings