Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5335 Papaver somniferum HOM05D005390 ORTHO05D007086 0.0e+00 1241.1 639 100.0
PSO478G4661 Papaver somniferum HOM05D005390 ORTHO05D007086 0.0e+00 1219.1 635 98.7
TAR374G1738 Trochodendron aralioides HOM05D005390 ORTHO05D007086 1.5e-254 882.9 622 73.8
Aqoxy3G01354 Aquilegia oxysepala HOM05D005390 ORTHO05D007086 5.7e-246 854.4 631 69.7
Nn4g22507 Nelumbo nucifera HOM05D005390 ORTHO05D007086 4.3e-241 838.2 635 70.2
Dinv38486 Davidia involucrata HOM05D005390 ORTHO05D007086 9.2e-228 793.9 536 74.1
Rhsim08G0183100 Rhododendron simsii HOM05D005390 ORTHO05D007086 1.2e-227 793.5 617 66.5
GSVIVG01007574001 Vitis vinifera HOM05D005390 ORTHO05D007086 2.7e-227 792.3 628 67.2
PGSC0003DMG400027069 Solanum tuberosum HOM05D005390 ORTHO05D007086 6.0e-227 791.2 625 65.1
Solyc06g071850.3 Solanum lycopersicum HOM05D005390 ORTHO05D007086 3.0e-226 788.9 625 65.0
vmacro19255 Vaccinium macrocarpon HOM05D005390 ORTHO05D007086 4.3e-225 785.0 670 62.2
Sopen06g028130 Solanum pennellii HOM05D005390 ORTHO05D007086 9.5e-225 783.9 627 64.3
TWI09G0451 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 2.1e-224 782.7 626 66.1
Peaxi162Scf00763g00330 Petunia axillaris HOM05D005390 ORTHO05D007086 3.6e-224 781.9 625 65.1
TWI39G0214 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 4.0e-223 778.5 623 65.8
Cfa018904 Carpinus fangiana HOM05D005390 ORTHO05D007086 8.9e-223 777.3 627 65.6
Hma1.2p1_0983F.1_g244080 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 4.4e-222 775.0 546 72.2
Glyma.04G191600 Glycine max HOM05D005390 ORTHO05D007086 2.9e-221 772.3 623 65.8
Nitab4.5_0014349g0010 Nicotiana tabacum HOM05D005390 ORTHO05D007086 6.4e-221 771.2 619 64.3
Lj9C473T10 Lonicera japonica HOM05D005390 ORTHO05D007086 1.9e-220 769.6 617 66.3
Phvul.009G170000 Phaseolus vulgaris HOM05D005390 ORTHO05D007086 5.1e-218 761.5 629 64.7
Nitab4.5_0000003g0930 Nicotiana tabacum HOM05D005390 ORTHO05D007086 6.6e-218 761.1 622 63.3
Thecc.03G120800 Theobroma cacao HOM05D005390 ORTHO05D007086 6.6e-218 761.1 625 65.3
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 1.5e-217 760.0 625 63.7
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 1.5e-217 760.0 625 63.7
QL10p005602 Quercus lobata HOM05D005390 ORTHO05D007086 1.5e-217 760.0 624 65.1
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 1.2e-216 756.9 616 64.8
Medtr3g075240 Medicago truncatula HOM05D005390 ORTHO05D007086 2.1e-216 756.1 633 63.2
Actinidia19375 Actinidia chinensis HOM05D005390 ORTHO05D007086 2.8e-216 755.7 618 66.0
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 2.4e-215 752.7 652 62.4
HanXRQChr09g0272781 Helianthus annuus HOM05D005390 ORTHO05D007086 6.8e-215 751.1 618 64.1
DCAR_016426 Daucus carota HOM05D005390 ORTHO05D007086 1.5e-214 750.0 565 68.8
CANSAT80G2255 Cannabis sativa HOM05D005390 ORTHO05D007086 3.4e-214 748.8 614 65.3
Manes.06G113700 Manihot esculenta HOM05D005390 ORTHO05D007086 3.4e-214 748.8 620 65.3
ATR0824G019 Amborella trichopoda HOM05D005390 ORTHO05D007086 8.4e-213 744.2 633 61.8
Eucgr.B00166 Eucalyptus grandis HOM05D005390 ORTHO05D007086 4.2e-212 741.9 627 62.4
Cc04_g10660 Coffea canephora HOM05D005390 ORTHO05D007086 9.3e-212 740.7 567 65.1
Gohir.A12G187300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 9.3e-212 740.7 625 64.6
PGR083G1300 Punica granatum HOM05D005390 ORTHO05D007086 9.3e-212 740.7 619 62.5
Duzib205G1771 Durio zibethinus HOM05D005390 ORTHO05D007086 2.7e-211 739.2 627 64.3
Gorai.008G204100 Gossypium raimondii HOM05D005390 ORTHO05D007086 2.7e-211 739.2 625 64.2
Gohir.D12G190300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 7.8e-211 737.6 625 64.2
Sp2g26330 Schrenkiella parvula HOM05D005390 ORTHO05D007086 6.6e-210 734.6 620 61.8
TPR.G38664 Trifolium pratense HOM05D005390 ORTHO05D007086 3.1e-207 725.7 621 62.2
Oeu011587.1 Olea europaea HOM05D005390 ORTHO05D007086 5.8e-206 721.5 557 66.1
Prupe.5G160000 Prunus persica HOM05D005390 ORTHO05D007086 5.8e-206 721.5 622 63.5
ClCG03G003390 Citrullus lanatus HOM05D005390 ORTHO05D007086 2.9e-205 719.2 630 59.8
AL8G40290 Arabidopsis lyrata HOM05D005390 ORTHO05D007086 8.4e-205 717.6 620 60.2
Glyma.06G174300 Glycine max HOM05D005390 ORTHO05D007086 1.1e-204 717.2 624 62.3
Ciclev10019194m.g Citrus clementina HOM05D005390 ORTHO05D007086 9.3e-204 714.1 640 61.1
ECA232G3921 Erigeron canadensis HOM05D005390 ORTHO05D007086 6.0e-203 711.4 615 61.5
Lj1g0026120 Lotus japonicus HOM05D005390 ORTHO05D007086 1.0e-202 710.7 617 61.4
EL10Ac7g18053 Beta vulgaris HOM05D005390 ORTHO05D007086 1.7e-202 709.9 651 59.0
Aa31LG1G18770 Aethionema arabicum HOM05D005390 ORTHO05D007086 3.9e-202 708.8 621 60.1
Carub.0008s2396 Capsella rubella HOM05D005390 ORTHO05D007086 5.1e-202 708.4 620 59.5
MD06G1160400 Malus domestica HOM05D005390 ORTHO05D007086 1.5e-201 706.8 626 62.5
CsaV3_1G009190 Cucumis sativus L. HOM05D005390 ORTHO05D007086 7.4e-201 704.5 630 58.3
Cpa.g.sc4.44 Carica papaya HOM05D005390 ORTHO05D007086 1.3e-200 703.7 632 60.1
Lsat_1_v5_gn_4_78320 Lactuca sativa HOM05D005390 ORTHO05D007086 1.6e-200 703.4 619 61.4
Thhalv10003779m.g Eutrema salsugineum HOM05D005390 ORTHO05D007086 2.1e-200 703.0 621 59.6
FAN13G2995 Fragaria x ananassa HOM05D005390 ORTHO05D007086 2.9e-197 692.6 610 61.3
SEGI_06673 Sequoiadendron giganteum HOM05D005390 ORTHO05D007086 4.9e-197 691.8 621 60.2
Lalb_Chr11g0069761 Lupinus albus HOM05D005390 ORTHO05D007086 6.4e-197 691.4 635 59.8
THA.LOC104818200 Tarenaya hassleriana HOM05D005390 ORTHO05D007086 1.9e-196 689.9 615 60.2
FAN18G2367 Fragaria x ananassa HOM05D005390 ORTHO05D007086 2.1e-195 686.4 614 60.7
Sabra12G0066700 Salix brachista HOM05D005390 ORTHO05D007086 2.1e-195 686.4 621 60.2
MSTRG.11518 Avicennia marina HOM05D005390 ORTHO05D007086 3.5e-195 685.6 625 57.8
AUR62025748 Chenopodium quinoa HOM05D005390 ORTHO05D007086 4.6e-195 685.3 576 62.8
arahy.Tifrunner.gnm1.ann1.EKVH9G Arachis hypogaea HOM05D005390 ORTHO05D007086 1.8e-194 683.3 580 62.2
CAN.G1046.1 Capsicum annuum HOM05D005390 ORTHO05D007086 5.1e-194 681.8 546 65.0
Potri.012G092000 Populus trichocarpa HOM05D005390 ORTHO05D007086 5.1e-194 681.8 630 59.0
RcHm_v2.0_Chr7g0191501 Rosa chinensis HOM05D005390 ORTHO05D007086 2.5e-193 679.5 614 61.2
SGA_v2.0_scaffold25G10792 Striga asiatica HOM05D005390 ORTHO05D007086 4.0e-191 672.2 648 55.9
AT5G63200 Arabidopsis thaliana HOM05D005390 ORTHO05D007086 2.0e-190 669.8 620 57.9
AUR62001260 Chenopodium quinoa HOM05D005390 ORTHO05D007086 2.6e-190 669.5 624 57.9
FAN08G1670 Fragaria x ananassa HOM05D005390 ORTHO05D007086 2.5e-188 662.9 613 59.9
COL.COLO4_04551 Corchorus olitorius HOM05D005390 ORTHO05D007086 4.2e-188 662.1 613 59.9
BolC9t53836H Brassica oleracea HOM05D005390 ORTHO05D007086 4.8e-184 648.7 626 56.7
Sed0027546 Sechium edule HOM05D005390 ORTHO05D007086 4.8e-184 648.7 523 62.7
C09p09230 Brassica napus HOM05D005390 ORTHO05D007086 5.3e-183 645.2 626 56.4
A09p08180 Brassica napus HOM05D005390 ORTHO05D007086 4.6e-179 632.1 625 55.2
BraA09t36469Z Brassica rapa HOM05D005390 ORTHO05D007086 4.6e-179 632.1 625 55.4
Zm00001eb144210 Zea mays HOM05D005390 ORTHO05D007086 2.3e-178 629.8 610 55.4
Hund05621 Selenicereus undatus HOM05D005390 ORTHO05D007086 3.7e-176 622.5 630 56.0
MELO3C002325.2 Cucumis melo HOM05D005390 ORTHO05D007086 5.9e-174 615.1 656 53.0
unitig_22.g5443 Utricularia gibba HOM05D005390 ORTHO05D007086 1.0e-173 614.4 608 54.1
Atru.BG.198.p Acer truncatum HOM05D005390 ORTHO05D007086 3.8e-173 612.5 507 63.3
Os01g0906600 Oryza sativa ssp. japonica HOM05D005390 ORTHO05D007086 1.2e-163 580.9 620 52.7
Nn1g05493 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.0e-161 573.5 525 61.3
CSS0013940 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 3.7e-160 569.3 459 66.0
HPP92_001962 Vanilla planifolia HOM05D005390 ORTHO05D007086 3.1e-159 566.2 623 52.0
AagrBONN_evm.TU.Sc2ySwM_228.344 Anthoceros agrestis HOM05D005390 ORTHO05D007086 5.3e-151 538.9 630 49.4
SMO356G0210 Selaginella moellendorffii HOM05D005390 ORTHO05D007086 1.0e-149 534.6 623 48.5
Sc22g0003910 Simmondsia chinensis HOM05D005390 ORTHO05D007086 4.7e-147 525.8 453 64.0
Mapoly0013s0178 Marchantia polymorpha HOM05D005390 ORTHO05D007086 4.4e-145 519.2 626 47.6
FvH4_5g07030 Fragaria vesca HOM05D005390 ORTHO05D007086 5.2e-138 495.7 450 59.6
Migut.O00224 Erythranthe guttata HOM05D005390 ORTHO05D007086 5.4e-135 485.7 614 47.1
Nn7g37481 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.9e-132 477.2 400 64.8
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 5.6e-132 475.7 618 46.6
Nn8g39688 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.0e-130 469.9 332 72.6
VMungo1309G2389 Vigna mungo HOM05D005390 ORTHO05D007086 1.5e-129 467.6 359 65.2
FAN04G1107 Fragaria x ananassa HOM05D005390 ORTHO05D007086 6.8e-122 442.2 364 63.2
Oeu053506.1 Olea europaea HOM05D005390 ORTHO05D007086 1.1e-114 418.3 316 65.8
CiPaw.12G034400 Carya illinoinensis HOM05D005390 ORTHO05D007086 1.2e-113 414.8 356 62.6
SalBow5G1843 Salvia bowleyana HOM05D005390 ORTHO05D007086 4.3e-108 396.4 504 47.2
Nn5g27251 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.2e-107 394.8 525 46.3
MBI11_g46067_MAGBIO Magnolia biondii HOM05D005390 ORTHO05D007086 4.2e-95 353.2 294 65.3
Nn8g40909 Nelumbo nucifera HOM05D005390 ORTHO05D007086 4.8e-83 313.2 215 73.5
MBI11_g46351_MAGBIO Magnolia biondii HOM05D005390 ORTHO05D007086 4.9e-80 303.1 257 64.6
VMungo1309G0829 Vigna mungo HOM05D005390 ORTHO05D007086 1.1e-79 302.0 254 66.5
Nn5g28724 Nelumbo nucifera HOM05D005390 ORTHO05D007086 5.8e-73 279.6 206 69.4
Nn1g08373 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.3e-72 278.5 191 72.3
Nn2g15275 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.7e-67 260.4 200 67.0
CsaV3_3G015420 Cucumis sativus L. HOM05D005390 ORTHO05D007086 3.8e-64 250.4 352 43.8
CiPaw.12G034500 Carya illinoinensis HOM05D005390 ORTHO05D007086 5.5e-63 246.5 206 62.1
Hma1.2p1_2683F.1_g326880 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 1.8e-61 241.5 172 69.8
CDE06G0744 Ceratophyllum demersum HOM05D005390 ORTHO05D007086 6.5e-56 223.0 175 66.3
CSS0032502 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 1.5e-52 211.8 174 64.9
CSS0049807 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 3.3e-52 210.7 174 64.4
CARHR277060 Cardamine hirsuta HOM05D005390 ORTHO05D007086 8.5e-48 196.1 169 58.0
Nn8g40618 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.1e-42 177.6 123 72.4
Hma1.2p1_2683F.1_g326890 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 1.0e-40 172.6 153 62.1
CDE06G2390 Ceratophyllum demersum HOM05D005390 ORTHO05D007086 4.4e-36 157.1 109 70.6
CsaV3_3G015410 Cucumis sativus L. HOM05D005390 ORTHO05D007086 6.3e-35 153.3 259 43.6
Nn1g03252 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.5e-33 147.5 93 79.6
Nn1g06247 Nelumbo nucifera HOM05D005390 ORTHO05D007086 8.5e-32 142.9 97 73.2
Nn6g32370 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.5e-28 132.1 102 63.7
Nn5g26726 Nelumbo nucifera HOM05D005390 ORTHO05D007086 4.4e-28 130.6 80 80.0
RcHm_v2.0_Chr5g0027631 Rosa chinensis HOM05D005390 ORTHO05D007086 4.4e-28 130.6 169 52.1
CARHR043650 Cardamine hirsuta HOM05D005390 ORTHO05D007086 6.3e-27 126.7 148 48.0
Psat7g117320 Pisum sativum HOM05D005390 ORTHO05D004709 3.8e-24 117.5 122 54.1
Nn1g06248 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.5e-23 115.5 78 73.1
Nn2g14552 Nelumbo nucifera HOM05D005390 ORTHO05D028071 4.4e-20 104.0 58 81.0
CAN.G1302.1 Capsicum annuum HOM05D005390 ORTHO05D002902 5.9e-17 93.6 307 28.3
RcHm_v2.0_Chr5g0027621 Rosa chinensis HOM05D005390 ORTHO05D007086 7.8e-17 93.2 78 59.0
CAN.G534.23 Capsicum annuum HOM05D005390 ORTHO05D007086 4.0e-13 80.9 70 52.9
TAR381G0053 Trochodendron aralioides HOM05D000018 ORTHO05D001172 1.7e-11 75.5 87 51.7
CAN.G755.13 Capsicum annuum HOM05D005390 ORTHO05D007086 2.2e-11 75.1 101 47.5
A06p18430 Brassica napus HOM05D005390 ORTHO05D028071 4.6e-09 67.4 46 58.7
A09p53940 Brassica napus HOM05D005390 ORTHO05D028071 1.7e-08 65.5 46 56.5
BraA09t40810Z Brassica rapa HOM05D005390 ORTHO05D028071 1.7e-08 65.5 46 56.5


User provided reference genes

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